crizotinib_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description crizotinib perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the crizotinib_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.148864
FNDC3B fibronectin type III domain containing 3B 0.0981943
PTPRM protein tyrosine phosphatase, receptor type, M 0.0674664
PCBP2 poly(rC) binding protein 2 0.0628968
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0606289
EIF4B eukaryotic translation initiation factor 4B 0.0552569
SDC4 syndecan 4 0.0547781
AFDN afadin, adherens junction formation factor 0.0528753
JMJD1C jumonji domain containing 1C 0.0528685
KTN1 kinectin 1 (kinesin receptor) 0.0526353
VEGFA vascular endothelial growth factor A 0.0513276
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0511149
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0504104
EEF2 eukaryotic translation elongation factor 2 0.049485
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0484171
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.048099
QKI QKI, KH domain containing, RNA binding 0.0480907
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0480453
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0480436
FBF1 Fas (TNFRSF6) binding factor 1 0.0476495
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0470359
ZFAND3 zinc finger, AN1-type domain 3 0.0460385
MYO6 myosin VI 0.0459321
SRRM1 serine/arginine repetitive matrix 1 0.0455414
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0454319
DTNA dystrobrevin, alpha 0.0443271
B2M beta-2-microglobulin 0.044281
CEMIP2 cell migration inducing hyaluronidase 2 0.0440916
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0432023
PTBP3 polypyrimidine tract binding protein 3 0.0424934
CCNY cyclin Y 0.0424546
SBF2 SET binding factor 2 0.0423888
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0419417
INSIG2 insulin induced gene 2 0.0418825
TMEM123 transmembrane protein 123 0.0417158
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0416085
CANX calnexin 0.0410797
HELZ helicase with zinc finger 0.0409454
LCOR ligand dependent nuclear receptor corepressor 0.0407598
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0404463
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0400824
EPS8 epidermal growth factor receptor pathway substrate 8 0.039265
ANKRD12 ankyrin repeat domain 12 0.038914
RPL14 ribosomal protein L14 0.0382338
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0380975
PTK2 protein tyrosine kinase 2 0.0380268
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0373303
ADGRG6 adhesion G protein-coupled receptor G6 0.0373041
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0372655
SUCO SUN domain containing ossification factor 0.0370855
PDLIM5 PDZ and LIM domain 5 0.0369737
GOLGA4 golgin A4 0.0369304
PLIN2 perilipin 2 0.0361934
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.036068
RLF rearranged L-myc fusion 0.0359407
RBM39 RNA binding motif protein 39 0.0356942
AKAP13 A kinase (PRKA) anchor protein 13 0.0356459
CAMTA1 calmodulin binding transcription activator 1 0.0356375
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.03553
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0352308
IL6ST interleukin 6 signal transducer 0.0351575
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0350026
MYH9 myosin, heavy chain 9, non-muscle 0.0347541
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0346996
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0346869
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0344793
KIF1B kinesin family member 1B 0.0340853
DSPP dentin sialophosphoprotein 0.033551
PHF21A PHD finger protein 21A 0.0334834
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0334242
PAPOLA poly(A) polymerase alpha 0.0333834
AKAP12 A kinase (PRKA) anchor protein 12 0.0328237
RPL3 ribosomal protein L3 0.0327766
RPL5 ribosomal protein L5 0.0327239
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0324151
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0323714
DDIT4 DNA-damage-inducible transcript 4 0.0323015
KDM6A lysine (K)-specific demethylase 6A 0.0319699
ITCH itchy E3 ubiquitin protein ligase 0.0318887
ZNF451 zinc finger protein 451 0.0315316
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0315252
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0311869
USP47 ubiquitin specific peptidase 47 0.0311282
GPBP1 GC-rich promoter binding protein 1 0.030846
SMC5 structural maintenance of chromosomes 5 0.030117
ANKRD11 ankyrin repeat domain 11 0.0297402
OLA1 Obg-like ATPase 1 0.0296026
RANBP9 RAN binding protein 9 0.0290675
RB1CC1 RB1-inducible coiled-coil 1 0.0289917
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0288315
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0288123
TOP1 topoisomerase (DNA) I 0.0285341
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0285095
DCAF6 DDB1 and CUL4 associated factor 6 0.0284961
MACF1 microtubule-actin crosslinking factor 1 0.0283955
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0282573
RAB1A RAB1A, member RAS oncogene family 0.0281708
KAT6A K(lysine) acetyltransferase 6A 0.0280962
STRN3 striatin, calmodulin binding protein 3 0.0279676
MARCHF6 membrane associated ring-CH-type finger 6 0.0279384

decreased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.230311
FN1 fibronectin 1 -0.210487
TIMP1 TIMP metallopeptidase inhibitor 1 -0.203565
APOB apolipoprotein B -0.147272
MT2A metallothionein 2A -0.127997
GPC3 glypican 3 -0.111263
TPT1 tumor protein, translationally-controlled 1 -0.0871137
TM4SF1 transmembrane 4 L six family member 1 -0.0853119
NKD1 naked cuticle homolog 1 (Drosophila) -0.0820834
IGFBP1 insulin-like growth factor binding protein 1 -0.0724946
GPC6 glypican 6 -0.071111
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0703443
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0692756
TMSB10 thymosin beta 10 -0.0643179
LOC112694756 uncharaterized LOC112694756 -0.0633545
MAML2 mastermind-like 2 (Drosophila) -0.0624196
NPAS2 neuronal PAS domain protein 2 -0.0590763
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0558901
APOA2 apolipoprotein A-II -0.053648
EGR1 early growth response 1 -0.053285
C3 complement component 3 -0.0526464
EHBP1 EH domain binding protein 1 -0.0510377
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0510274
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0488669
RPS19 ribosomal protein S19 -0.0488578
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0482851
RNF213 ring finger protein 213 -0.046469
H1-0 H1.0 linker histone -0.0461907
SOX5 SRY (sex determining region Y)-box 5 -0.0438268
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0430968
FRMD5 FERM domain containing 5 -0.0426936
FTL ferritin, light polypeptide -0.0408479
DNAH17 dynein, axonemal, heavy chain 17 -0.0401824
MARCKS myristoylated alanine-rich protein kinase C substrate -0.038574
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0382122
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0379895
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0377411
RPS24 ribosomal protein S24 -0.036568
ZBTB20 zinc finger and BTB domain containing 20 -0.0363282
ATXN1 ataxin 1 -0.0358944
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 -0.0356658
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0340551
A2M alpha-2-macroglobulin -0.0326136
GK glycerol kinase -0.0325157
KLF6 Kruppel-like factor 6 -0.0320008
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.031574
EPAS1 endothelial PAS domain protein 1 -0.0313193
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0309199
RPL31 ribosomal protein L31 -0.0305447
NCOA7 nuclear receptor coactivator 7 -0.0304003
AHSG alpha-2-HS-glycoprotein -0.0298905
RPL11 ribosomal protein L11 -0.0297253
EXT1 exostosin glycosyltransferase 1 -0.0294028
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0293162
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0292807
TFRC transferrin receptor -0.0292567
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.0290323
RPS8 ribosomal protein S8 -0.0286024
CTSB cathepsin B -0.0285154
RUNX1 runt-related transcription factor 1 -0.0282075
PTCHD4 patched domain containing 4 -0.0281851
SLC38A2 solute carrier family 38, member 2 -0.0277028
ITGB5 integrin, beta 5 -0.0276585
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0274598
IFITM1 interferon induced transmembrane protein 1 -0.0273968
RPL35A ribosomal protein L35a -0.0271171
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0264615
PEG3 paternally expressed 3 -0.0260734
RPS11 ribosomal protein S11 -0.0257324
SYN3 synapsin III -0.025491
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0254808
ARID3A AT rich interactive domain 3A (BRIGHT-like) -0.0254286
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0250813
ITGA1 integrin, alpha 1 -0.0250523
RPL28 ribosomal protein L28 -0.0241153
HMGA1 high mobility group AT-hook 1 -0.0239768
RPS13 ribosomal protein S13 -0.023934
RPLP2 ribosomal protein, large, P2 -0.0236664
ZMYND8 zinc finger, MYND-type containing 8 -0.0236567
DOK6 docking protein 6 -0.0235482
RPL36 ribosomal protein L36 -0.0233707
ACTN4 actinin, alpha 4 -0.0232394
RPL37A ribosomal protein L37a -0.023208
PDGFB platelet-derived growth factor beta polypeptide -0.0231584
DOCK1 dedicator of cytokinesis 1 -0.0230747
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -0.0229216
TGFBI transforming growth factor, beta-induced, 68kDa -0.0229151
NPR2 natriuretic peptide receptor 2 -0.0228618
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.022658
IER3 immediate early response 3 -0.0223123
IFI6 interferon, alpha-inducible protein 6 -0.0222953
GNAS GNAS complex locus -0.0215918
RAI14 retinoic acid induced 14 -0.0215419
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0214145
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0213384
OSMR oncostatin M receptor -0.0211426
KPNB1 karyopherin (importin) beta 1 -0.0210646
NDRG1 N-myc downstream regulated 1 -0.0205974
APOC2 apolipoprotein C-II -0.0205583
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0205277