crizotinib_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description crizotinib perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the crizotinib_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.123526
ERRFI1 ERBB receptor feedback inhibitor 1 0.103553
MACF1 microtubule-actin crosslinking factor 1 0.083794
TRIP12 thyroid hormone receptor interactor 12 0.0834887
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0817382
ZFAND3 zinc finger, AN1-type domain 3 0.0730741
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0668525
BCAR3 breast cancer anti-estrogen resistance 3 0.0654345
JMJD1C jumonji domain containing 1C 0.0615071
CAPRIN2 caprin family member 2 0.0581864
PSD3 pleckstrin and Sec7 domain containing 3 0.0580666
ANKRD11 ankyrin repeat domain 11 0.0564763
RTN4 reticulon 4 0.0557793
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.054945
RCOR1 REST corepressor 1 0.0545294
SPAG9 sperm associated antigen 9 0.0537669
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0525336
ARHGAP5 Rho GTPase activating protein 5 0.0512089
APP amyloid beta (A4) precursor protein 0.0509103
CENPF centromere protein F, 350/400kDa 0.047815
KMT2C lysine (K)-specific methyltransferase 2C 0.0469086
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0465459
ZEB1 zinc finger E-box binding homeobox 1 0.0460901
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0450483
AHNAK AHNAK nucleoprotein 0.0446084
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.04347
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0434663
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0429102
USP9X ubiquitin specific peptidase 9, X-linked 0.0428566
USP34 ubiquitin specific peptidase 34 0.0427947
PUM2 pumilio RNA-binding family member 2 0.0426442
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.04118
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0410907
WWTR1 WW domain containing transcription regulator 1 0.0409216
TMEM41B transmembrane protein 41B 0.0407024
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.040449
MARCHF6 membrane associated ring-CH-type finger 6 0.0400241
SFPQ splicing factor proline/glutamine-rich 0.0387376
RBM39 RNA binding motif protein 39 0.0383449
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0376374
ADAM17 ADAM metallopeptidase domain 17 0.0375895
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0375102
ANKRD17 ankyrin repeat domain 17 0.0373768
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0372707
OGA O-GlcNAcase 0.0371208
BIRC6 baculoviral IAP repeat containing 6 0.037088
TM4SF1 transmembrane 4 L six family member 1 0.0370129
FMNL2 formin-like 2 0.036989
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0369202
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0368233
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0367294
SLC38A2 solute carrier family 38, member 2 0.0366056
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0363457
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0358178
MATR3 matrin 3 0.0356088
TOP1 topoisomerase (DNA) I 0.0351574
WAC WW domain containing adaptor with coiled-coil 0.0349754
TSC22D2 TSC22 domain family, member 2 0.0348015
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0346707
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0343779
VCL vinculin 0.034314
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0342882
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0341962
MKI67 marker of proliferation Ki-67 0.0341782
SRPK2 SRSF protein kinase 2 0.0340089
RERE arginine-glutamic acid dipeptide (RE) repeats 0.033993
ZBTB38 zinc finger and BTB domain containing 38 0.0335499
FNIP1 folliculin interacting protein 1 0.0333979
ERBIN erbb2 interacting protein 0.0333239
ECPAS Ecm29 proteasome adaptor and scaffold 0.0332014
CUL3 cullin 3 0.0331776
OLA1 Obg-like ATPase 1 0.0327356
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0321844
ECT2 epithelial cell transforming 2 0.0320327
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0319645
IPO7 importin 7 0.0319078
EREG epiregulin 0.0317378
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0313495
AFF4 AF4/FMR2 family, member 4 0.031
TRA2A transformer 2 alpha homolog (Drosophila) 0.0302994
KCMF1 potassium channel modulatory factor 1 0.0300718
TNPO1 transportin 1 0.030045
STRN3 striatin, calmodulin binding protein 3 0.0299726
EEF2 eukaryotic translation elongation factor 2 0.0299461
MEMO1 mediator of cell motility 1 0.0299299
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0297762
CHD1 chromodomain helicase DNA binding protein 1 0.0293102
QKI QKI, KH domain containing, RNA binding 0.0288276
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.028769
CSNK1A1 casein kinase 1, alpha 1 0.0285977
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0283735
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0279709
NCKAP1 NCK-associated protein 1 0.0279634
FXR1 fragile X mental retardation, autosomal homolog 1 0.0272726
MYH9 myosin, heavy chain 9, non-muscle 0.0271767
GLS2 glutaminase 2 (liver, mitochondrial) 0.0271277
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0271172
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0270852
GSK3B glycogen synthase kinase 3 beta 0.0269837
RASA2 RAS p21 protein activator 2 0.0267534

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.132847
PTMA prothymosin, alpha -0.117859
TMSB10 thymosin beta 10 -0.108368
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.100766
MT2A metallothionein 2A -0.0906805
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0756719
TP63 tumor protein p63 -0.0746974
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0674246
DLG1 discs, large homolog 1 (Drosophila) -0.0673745
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0634031
ESYT2 extended synaptotagmin-like protein 2 -0.0550656
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0542538
POTEF POTE ankyrin domain family, member F -0.0505656
RNF213 ring finger protein 213 -0.0497607
EFNA5 ephrin-A5 -0.0485257
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0463333
CD44 CD44 molecule (Indian blood group) -0.0451074
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0446334
FTL ferritin, light polypeptide -0.0436733
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0436054
EPHA4 EPH receptor A4 -0.0432522
RPS6 ribosomal protein S6 -0.0403973
HLA-B major histocompatibility complex, class I, B -0.0398104
RPS8 ribosomal protein S8 -0.0393669
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0393276
CADM2 cell adhesion molecule 2 -0.0386249
RPS12 ribosomal protein S12 -0.0385939
MT1E metallothionein 1E -0.038191
TXNIP thioredoxin interacting protein -0.037789
MT1X metallothionein 1X -0.0375617
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0367988
WARS1 tryptophanyl-tRNA synthetase 1 -0.0353999
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0349891
RPS19 ribosomal protein S19 -0.0349178
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0346263
FTH1 ferritin, heavy polypeptide 1 -0.0333331
RPS3 ribosomal protein S3 -0.0320652
RPL36 ribosomal protein L36 -0.0315577
RPL18 ribosomal protein L18 -0.030876
HILPDA hypoxia inducible lipid droplet-associated -0.0306944
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 -0.0299158
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0298244
TNS3 tensin 3 -0.0297695
RPL35 ribosomal protein L35 -0.0297325
HSPG2 heparan sulfate proteoglycan 2 -0.0294435
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0289597
RPL12 ribosomal protein L12 -0.0289002
HMGA1 high mobility group AT-hook 1 -0.0278772
TGM2 transglutaminase 2 -0.0267319
NDRG1 N-myc downstream regulated 1 -0.0265462
RPL35A ribosomal protein L35a -0.0262045
DNER delta/notch-like EGF repeat containing -0.0255698
HLA-A major histocompatibility complex, class I, A -0.0254969
PTPRF protein tyrosine phosphatase, receptor type, F -0.0254211
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0250144
CALR calreticulin -0.0242725
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0240278
RPL37A ribosomal protein L37a -0.0240179
PLIN2 perilipin 2 -0.0230684
ANKRD26 ankyrin repeat domain 26 -0.0230621
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0228759
GYS1 glycogen synthase 1 (muscle) -0.022696
CSMD3 CUB and Sushi multiple domains 3 -0.0222258
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0214939
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0214127
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0213095
TRIM56 tripartite motif containing 56 -0.0212859
IFIH1 interferon induced with helicase C domain 1 -0.0210187
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0206347
MYOF myoferlin -0.0202596
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 -0.0201248
RPLP2 ribosomal protein, large, P2 -0.0200733
COL5A2 collagen, type V, alpha 2 -0.0200447
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 -0.0198335
ZNF638 zinc finger protein 638 -0.0196957
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0196681
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0193978
SLK STE20-like kinase -0.0193797
PDK3 pyruvate dehydrogenase kinase, isozyme 3 -0.0192253
RIGI RNA sensor RIG-I -0.0187702
RPL26 ribosomal protein L26 -0.0187112
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0186627
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0185787
CFAP299 cilia and flagella associated protein 299 -0.0185589
RPL34 ribosomal protein L34 -0.0185432
GOLGA4 golgin A4 -0.0183031
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0182896
RPS2 ribosomal protein S2 -0.0181893
RPL19 ribosomal protein L19 -0.0181799
ARL4C ADP-ribosylation factor-like 4C -0.0181308
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0179727
GLG1 golgi glycoprotein 1 -0.0179329
CBX3 chromobox homolog 3 -0.0177365
RPL37 ribosomal protein L37 -0.0176755
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0175936
LMNA lamin A/C -0.0169858
IFITM1 interferon induced transmembrane protein 1 -0.0169572
PCDH1 protocadherin 1 -0.0169377
ECE1 endothelin converting enzyme 1 -0.0168747
ANGPTL4 angiopoietin-like 4 -0.0168122