crizotinib_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description crizotinib perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the crizotinib_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZFAND3 zinc finger, AN1-type domain 3 0.049943
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0446344
PTK2 protein tyrosine kinase 2 0.0442804
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0432434
DENND4A DENN/MADD domain containing 4A 0.0425301
USP3 ubiquitin specific peptidase 3 0.0424456
FAM168A family with sequence similarity 168, member A 0.0412527
TXNRD1 thioredoxin reductase 1 0.039379
DSCAM Down syndrome cell adhesion molecule 0.0369299
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0350496
NAMPT nicotinamide phosphoribosyltransferase 0.0345511
WDR43 WD repeat domain 43 0.0335523
KDM3A lysine (K)-specific demethylase 3A 0.0318554
RPL4 ribosomal protein L4 0.0302505
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0296925
ASPH aspartate beta-hydroxylase 0.0292244
ZNF292 zinc finger protein 292 0.0289094
OSBPL9 oxysterol binding protein-like 9 0.028096
MARCHF6 membrane associated ring-CH-type finger 6 0.0271326
CAMTA1 calmodulin binding transcription activator 1 0.0254535
RBM39 RNA binding motif protein 39 0.0254347
SPAG9 sperm associated antigen 9 0.025144
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.024538
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0241694
CYRIB CYFIP related Rac1 interactor B 0.0241149
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0240685
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0232621
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0231863
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0231324
OLA1 Obg-like ATPase 1 0.0228589
HSPA8 heat shock 70kDa protein 8 0.0225739
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0224214
MTMR3 myotubularin related protein 3 0.0223812
TFG TRK-fused gene 0.0223509
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0222354
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.021342
JAK1 Janus kinase 1 0.0213017
ANKRD11 ankyrin repeat domain 11 0.0210642
BIRC2 baculoviral IAP repeat containing 2 0.0209681
BCLAF1 BCL2-associated transcription factor 1 0.0208312
MACF1 microtubule-actin crosslinking factor 1 0.0206154
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.020346
CXCL8 chemokine (C-X-C motif) ligand 8 0.0202775
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0200517
RPL14 ribosomal protein L14 0.0200004
AFF4 AF4/FMR2 family, member 4 0.0197795
FXR1 fragile X mental retardation, autosomal homolog 1 0.0197228
RTN4 reticulon 4 0.0194816
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0191666
RPS12 ribosomal protein S12 0.0190655
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0188698
RPS2 ribosomal protein S2 0.018815
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 0.0184808
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0182708
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0181348
EIF4A3 eukaryotic translation initiation factor 4A3 0.0181221
AKAP13 A kinase (PRKA) anchor protein 13 0.0180569
RBM33 RNA binding motif protein 33 0.0180569
RYBP RING1 and YY1 binding protein 0.0180039
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0179574
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0178673
CYTH1 cytohesin 1 0.0176871
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.0175122
TRA2A transformer 2 alpha homolog (Drosophila) 0.01728
RAD21 RAD21 homolog (S. pombe) 0.0171123
MAPK8 mitogen-activated protein kinase 8 0.0165333
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0165062
YAP1 Yes-associated protein 1 0.0164431
IST1 increased sodium tolerance 1 homolog (yeast) 0.0163406
PPME1 protein phosphatase methylesterase 1 0.0162325
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0161332
APP amyloid beta (A4) precursor protein 0.0161234
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0160326
IFRD1 interferon-related developmental regulator 1 0.0160033
NCKAP1 NCK-associated protein 1 0.0157053
USP15 ubiquitin specific peptidase 15 0.0156918
SMAP1 small ArfGAP 1 0.0155692
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0154279
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0152827
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H 0.0151978
RB1CC1 RB1-inducible coiled-coil 1 0.0151804
KMT2E lysine (K)-specific methyltransferase 2E 0.0151273
WIPF2 WAS/WASL interacting protein family, member 2 0.0151252
ZEB1 zinc finger E-box binding homeobox 1 0.0150117
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0149911
HBP1 HMG-box transcription factor 1 0.0149771
EWSR1 EWS RNA-binding protein 1 0.0148724
NEK7 NIMA-related kinase 7 0.0148524
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0148427
TMSB4X thymosin beta 4, X-linked 0.0146296
PUM2 pumilio RNA-binding family member 2 0.0145829
SMAD2 SMAD family member 2 0.0144572
RBM8A RNA binding motif protein 8A 0.0144161
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.014355
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0142926
CFLAR CASP8 and FADD-like apoptosis regulator 0.014264
RHEB Ras homolog enriched in brain 0.0142406
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0141955
YBX3 Y box binding protein 3 0.0139054
RASAL2 RAS protein activator like 2 0.0138987

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.318652
MT2A metallothionein 2A -0.245774
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.182274
FTL ferritin, light polypeptide -0.131716
VIM vimentin -0.122269
TMSB10 thymosin beta 10 -0.0845799
POTEF POTE ankyrin domain family, member F -0.0843456
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0779206
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0577768
CMIP c-Maf inducing protein -0.0544094
AKAP12 A kinase (PRKA) anchor protein 12 -0.0480437
PFN1 profilin 1 -0.0473625
ACTG1 actin gamma 1 -0.0468798
RPLP0 ribosomal protein, large, P0 -0.0462156
PDIA3 protein disulfide isomerase family A, member 3 -0.0438943
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.042421
THSD4 thrombospondin, type I, domain containing 4 -0.0401252
STC1 stanniocalcin 1 -0.0386453
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0365189
EGR1 early growth response 1 -0.0346044
IGF2 insulin-like growth factor 2 -0.0345397
PYGL phosphorylase, glycogen, liver -0.0343177
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0340032
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0338923
DOCK4 dedicator of cytokinesis 4 -0.0332733
HMGA1 high mobility group AT-hook 1 -0.0329613
IGFBP3 insulin-like growth factor binding protein 3 -0.0322949
LDHA lactate dehydrogenase A -0.0321631
FTH1 ferritin, heavy polypeptide 1 -0.0318935
RPLP1 ribosomal protein, large, P1 -0.030232
VDAC1 voltage-dependent anion channel 1 -0.0286349
PKM pyruvate kinase, muscle -0.0273
TM4SF1 transmembrane 4 L six family member 1 -0.0269542
S100A6 S100 calcium binding protein A6 -0.0263037
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0262887
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0262426
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0261561
BASP1 brain abundant, membrane attached signal protein 1 -0.0250739
FLNB filamin B, beta -0.0243551
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0243461
WWOX WW domain containing oxidoreductase -0.0241805
ERBIN erbb2 interacting protein -0.0240621
EIF1 eukaryotic translation initiation factor 1 -0.0234513
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0233539
PARD3 par-3 family cell polarity regulator -0.0232098
TPI1 triosephosphate isomerase 1 -0.023132
DOCK5 dedicator of cytokinesis 5 -0.0231189
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0225043
KIF5B kinesin family member 5B -0.0221066
C15ORF48 chromosome 15 open reading frame 48 -0.0218714
RPL19 ribosomal protein L19 -0.0216367
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.021353
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.021296
IL6 interleukin 6 -0.0212187
FMNL2 formin-like 2 -0.0203052
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0202446
TAGLN2 transgelin 2 -0.0201185
PLS3 plastin 3 -0.0197194
ACTN1 actinin, alpha 1 -0.0195951
S100A11 S100 calcium binding protein A11 -0.0193997
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0193312
UBC ubiquitin C -0.0192082
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0191386
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0190492
RPS5 ribosomal protein S5 -0.0189498
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0188943
FNDC3B fibronectin type III domain containing 3B -0.0187259
EGFR epidermal growth factor receptor -0.0187169
MCL1 myeloid cell leukemia 1 -0.0186932
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0184668
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0183015
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0181229
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0180306
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0178963
BICC1 BicC family RNA binding protein 1 -0.0176672
FGB fibrinogen beta chain -0.0176635
PDE4D phosphodiesterase 4D, cAMP-specific -0.0175836
LDHB lactate dehydrogenase B -0.0175527
LMAN1 lectin, mannose-binding, 1 -0.0174556
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0172998
S100A10 S100 calcium binding protein A10 -0.0172619
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0169265
PTMA prothymosin, alpha -0.0167357
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0165795
IGFBP4 insulin-like growth factor binding protein 4 -0.0165608
LOC102724023 ES1 protein homolog, mitochondrial -0.0164094
RPS15 ribosomal protein S15 -0.016396
RPS19 ribosomal protein S19 -0.0163594
PDIA6 protein disulfide isomerase family A, member 6 -0.0163171
TMEM87A transmembrane protein 87A -0.0162881
RPS6 ribosomal protein S6 -0.0162183
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 -0.0161794
MARCHF4 membrane associated ring-CH-type finger 4 -0.0161556
RPL8 ribosomal protein L8 -0.0160592
SAMD4A sterile alpha motif domain containing 4A -0.0160172
YY1 YY1 transcription factor -0.015975
RAD51B RAD51 paralog B -0.0159214
FGG fibrinogen gamma chain -0.0157253
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0156307
BIRC3 baculoviral IAP repeat containing 3 -0.0155607