crizotinib_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description crizotinib perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the crizotinib_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.133052
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0893489
ZFAND3 zinc finger, AN1-type domain 3 0.0856329
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0785844
CAMTA1 calmodulin binding transcription activator 1 0.0768534
RICTOR RPTOR independent companion of MTOR, complex 2 0.076528
MCL1 myeloid cell leukemia 1 0.0760474
PCBP2 poly(rC) binding protein 2 0.075412
ZCCHC7 zinc finger, CCHC domain containing 7 0.0740895
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0708089
PTK2 protein tyrosine kinase 2 0.070724
MACF1 microtubule-actin crosslinking factor 1 0.0684177
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0660811
AFF3 AF4/FMR2 family, member 3 0.0634068
JMJD1C jumonji domain containing 1C 0.0625225
RAB7A RAB7A, member RAS oncogene family 0.0625048
CSDE1 cold shock domain containing E1, RNA-binding 0.0620898
TPM3 tropomyosin 3 0.060015
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.058969
FMNL2 formin-like 2 0.0576841
BIRC6 baculoviral IAP repeat containing 6 0.0554243
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0551079
MCTP1 multiple C2 domains, transmembrane 1 0.0540143
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0528842
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0522141
ZMYM2 zinc finger, MYM-type 2 0.051229
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0511826
COPA coatomer protein complex, subunit alpha 0.0503747
RBM39 RNA binding motif protein 39 0.0503011
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0496114
TPM2 tropomyosin 2 (beta) 0.0490462
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0486307
BRD2 bromodomain containing 2 0.048581
PDE4D phosphodiesterase 4D, cAMP-specific 0.0485601
OGA O-GlcNAcase 0.0459165
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.045812
SETD5 SET domain containing 5 0.045491
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0450509
CCNL1 cyclin L1 0.0450486
EEF2 eukaryotic translation elongation factor 2 0.0448935
TXNRD1 thioredoxin reductase 1 0.0445057
UBE2H ubiquitin-conjugating enzyme E2H 0.0443191
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0443
SNX9 sorting nexin 9 0.0438224
ACTN1 actinin, alpha 1 0.0430655
YBX3 Y box binding protein 3 0.0429862
GSK3B glycogen synthase kinase 3 beta 0.0427834
KTN1 kinectin 1 (kinesin receptor) 0.0419477
RSF1 remodeling and spacing factor 1 0.0413712
PDLIM5 PDZ and LIM domain 5 0.0408201
MED13L mediator complex subunit 13-like 0.0407714
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0407525
EIF4B eukaryotic translation initiation factor 4B 0.0397905
CUL3 cullin 3 0.0395152
KDM2A lysine (K)-specific demethylase 2A 0.0394232
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0391148
TRIO trio Rho guanine nucleotide exchange factor 0.0385702
AFF4 AF4/FMR2 family, member 4 0.0378327
USP34 ubiquitin specific peptidase 34 0.0373924
RB1CC1 RB1-inducible coiled-coil 1 0.036805
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0363868
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 0.0363511
TRA2A transformer 2 alpha homolog (Drosophila) 0.0355995
CNOT4 CCR4-NOT transcription complex, subunit 4 0.0353015
SRRM1 serine/arginine repetitive matrix 1 0.0349773
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0342332
ZFC3H1 zinc finger, C3H1-type containing 0.0340469
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0338578
FNIP1 folliculin interacting protein 1 0.0333984
PHF21A PHD finger protein 21A 0.033381
NUP58 nucleoporin 58 0.03324
EXT1 exostosin glycosyltransferase 1 0.0328058
PUM1 pumilio RNA-binding family member 1 0.032786
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0327448
GATAD2B GATA zinc finger domain containing 2B 0.0326114
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0322122
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.031842
MMP12 matrix metallopeptidase 12 0.0317919
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0317707
MSN moesin 0.0317636
ANO6 anoctamin 6 0.031408
BCLAF1 BCL2-associated transcription factor 1 0.0313348
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0312143
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0310427
BRD4 bromodomain containing 4 0.0307285
KMT2E lysine (K)-specific methyltransferase 2E 0.0307097
RBM25 RNA binding motif protein 25 0.0305215
NBAS neuroblastoma amplified sequence 0.0303839
RHEB Ras homolog enriched in brain 0.0302771
NLGN1 neuroligin 1 0.0301774
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0301772
TBK1 TANK-binding kinase 1 0.029788
HELZ helicase with zinc finger 0.0293001
FER fer (fps/fes related) tyrosine kinase 0.0292346
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0291429
FOXJ3 forkhead box J3 0.0288171
NCKAP1 NCK-associated protein 1 0.0287207
ZNF644 zinc finger protein 644 0.0286815
FXR1 fragile X mental retardation, autosomal homolog 1 0.0286547
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0286113

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.224404
STAT1 signal transducer and activator of transcription 1, 91kDa -0.126381
TFPI2 tissue factor pathway inhibitor 2 -0.1242
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0766795
PTMA prothymosin, alpha -0.0722241
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0707315
RAD51B RAD51 paralog B -0.0651975
GRAMD1B GRAM domain containing 1B -0.0651347
LOC112694756 uncharaterized LOC112694756 -0.0502888
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0501677
NCOA7 nuclear receptor coactivator 7 -0.0501013
RPLP1 ribosomal protein, large, P1 -0.0488273
ZNFX1 zinc finger, NFX1-type containing 1 -0.0460519
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0438788
PLSCR1 phospholipid scramblase 1 -0.0433859
VDAC1 voltage-dependent anion channel 1 -0.042235
RPL12 ribosomal protein L12 -0.0409602
RPL26 ribosomal protein L26 -0.0394111
IFIH1 interferon induced with helicase C domain 1 -0.039342
ACTG1 actin gamma 1 -0.0388827
IGF1R insulin-like growth factor 1 receptor -0.0380358
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0378496
ZNF217 zinc finger protein 217 -0.0378172
H1-0 H1.0 linker histone -0.0378012
RPS8 ribosomal protein S8 -0.0377073
NAP1L1 nucleosome assembly protein 1-like 1 -0.0374712
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0372396
RIGI RNA sensor RIG-I -0.035971
ATP11A ATPase, class VI, type 11A -0.0342191
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0336528
MYL12B myosin, light chain 12B, regulatory -0.0333911
PCLO piccolo presynaptic cytomatrix protein -0.0330276
RPLP0 ribosomal protein, large, P0 -0.0325817
UBB ubiquitin B -0.0319616
GNAS GNAS complex locus -0.0318985
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0318627
PMP22 peripheral myelin protein 22 -0.0309888
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0308361
RPL35A ribosomal protein L35a -0.0306701
RACK1 receptor for activated C kinase 1 -0.0304802
LMAN1 lectin, mannose-binding, 1 -0.0304003
PREPL prolyl endopeptidase-like -0.0303056
RPS24 ribosomal protein S24 -0.028181
ADAR adenosine deaminase, RNA-specific -0.0281725
CAVIN1 caveolae associated protein 1 -0.028125
RIMS2 regulating synaptic membrane exocytosis 2 -0.027482
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0268009
RPS4X ribosomal protein S4, X-linked -0.0266869
RPL38 ribosomal protein L38 -0.026593
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0264825
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0258558
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0258235
RPS27A ribosomal protein S27a -0.0258183
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0256117
PDIA4 protein disulfide isomerase family A, member 4 -0.0254971
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0252196
RPL34 ribosomal protein L34 -0.0251159
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa -0.0247878
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase -0.0244809
BSG basigin (Ok blood group) -0.0244322
RPS29 ribosomal protein S29 -0.0240398
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0240228
STAT2 signal transducer and activator of transcription 2, 113kDa -0.0236741
TRIM56 tripartite motif containing 56 -0.0236037
TPI1 triosephosphate isomerase 1 -0.0232878
RPS15 ribosomal protein S15 -0.0231511
TUBB tubulin, beta class I -0.0228748
GSTP1 glutathione S-transferase pi 1 -0.0228733
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0224345
CCND2 cyclin D2 -0.0223409
RPL32 ribosomal protein L32 -0.0221416
CLSPN claspin -0.0219776
AHNAK AHNAK nucleoprotein -0.0218712
SRP72 signal recognition particle 72kDa -0.0218329
RBL1 retinoblastoma-like 1 -0.0215287
PARP9 poly (ADP-ribose) polymerase family, member 9 -0.0213719
BZW1 basic leucine zipper and W2 domains 1 -0.0211924
RNF213 ring finger protein 213 -0.0211339
PRKCE protein kinase C, epsilon -0.021108
EIF1 eukaryotic translation initiation factor 1 -0.020467
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0204619
H1-3 H1.3 linker histone, cluster member -0.0204059
HLA-E major histocompatibility complex, class I, E -0.0203344
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0202276
KNTC1 kinetochore associated 1 -0.0200937
CALU calumenin -0.0200839
WWOX WW domain containing oxidoreductase -0.0199769
CCND1 cyclin D1 -0.0199477
BRCA1 breast cancer 1, early onset -0.0197924
KLF6 Kruppel-like factor 6 -0.0197309
FOXP1 forkhead box P1 -0.0196739
WDHD1 WD repeat and HMG-box DNA binding protein 1 -0.0195983
TGIF1 TGFB-induced factor homeobox 1 -0.0193374
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0193016
ATAD2 ATPase family, AAA domain containing 2 -0.019283
RRBP1 ribosome binding protein 1 -0.0192517
CCDC47 coiled-coil domain containing 47 -0.0191875
ZFR zinc finger RNA binding protein -0.0191785
ANKRD36C ankyrin repeat domain 36C -0.019168
DEK DEK proto-oncogene -0.019154