crystallography-x-ray Gene Set

Dataset Phosphosite Textmining Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

118 proteins co-occuring with the biological term crystallography-x-ray in abstracts of publications describing phosphosites from the Phosphosite Textmining Biological Term Annotations dataset.

Symbol Name
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
AKT1 v-akt murine thymoma viral oncogene homolog 1
APC adenomatous polyposis coli
APOA1BP apolipoprotein A-I binding protein
APP amyloid beta (A4) precursor protein
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
BCAR1 breast cancer anti-estrogen resistance 1
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide
BIRC5 baculoviral IAP repeat containing 5
BRIP1 BRCA1 interacting protein C-terminal helicase 1
CALM1 calmodulin 1 (phosphorylase kinase, delta)
CAMK2A calcium/calmodulin-dependent protein kinase II alpha
CARM1 coactivator-associated arginine methyltransferase 1
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family)
CASP6 caspase 6, apoptosis-related cysteine peptidase
CDCP1 CUB domain containing protein 1
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH5 cadherin 5, type 2 (vascular endothelium)
CDK2 cyclin-dependent kinase 2
CDK4 cyclin-dependent kinase 4
CDK7 cyclin-dependent kinase 7
CDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
CSF1R colony stimulating factor 1 receptor
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTTN cortactin
CYTH1 cytohesin 1
CYTH2 cytohesin 2
CYTH3 cytohesin 3
DNMT1 DNA (cytosine-5-)-methyltransferase 1
DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1)
DYNLL1 dynein, light chain, LC8-type 1
EPHA3 EPH receptor A3
EPHB2 EPH receptor B2
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB3 erb-b2 receptor tyrosine kinase 3
FES FES proto-oncogene, tyrosine kinase
FGFR2 fibroblast growth factor receptor 2
FSCN1 fascin actin-bundling protein 1
GABRG2 gamma-aminobutyric acid (GABA) A receptor, gamma 2
GCK glucokinase (hexokinase 4)
GGA1 golgi-associated, gamma adaptin ear containing, ARF binding protein 1
GORASP1 golgi reassembly stacking protein 1, 65kDa
GSK3A glycogen synthase kinase 3 alpha
HDAC8 histone deacetylase 8
HIST1H3A histone cluster 1, H3a
IGF1R insulin-like growth factor 1 receptor
INSR insulin receptor
IRAK4 interleukin-1 receptor-associated kinase 4
IRF3 interferon regulatory factor 3
IRF5 interferon regulatory factor 5
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
ITGB7 integrin, beta 7
JUN jun proto-oncogene
JUND jun D proto-oncogene
KCNJ4 potassium channel, inwardly rectifying subfamily J, member 4
KIF2C kinesin family member 2C
LAT linker for activation of T cells
LCK LCK proto-oncogene, Src family tyrosine kinase
LPO lactoperoxidase
LRP1 low density lipoprotein receptor-related protein 1
MAP2K1 mitogen-activated protein kinase kinase 1
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MET MET proto-oncogene, receptor tyrosine kinase
NCF1 neutrophil cytosolic factor 1
NEK2 NIMA-related kinase 2
NEK6 NIMA-related kinase 6
NEK7 NIMA-related kinase 7
NOS3 nitric oxide synthase 3 (endothelial cell)
NRXN1 neurexin 1
OTUD5 OTU deubiquitinase 5
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1
PDPK1 3-phosphoinositide dependent protein kinase 1
PEBP1 phosphatidylethanolamine binding protein 1
PIP5K1C phosphatidylinositol-4-phosphate 5-kinase, type I, gamma
PKLR pyruvate kinase, liver and RBC
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PRKACA protein kinase, cAMP-dependent, catalytic, alpha
PRKCI protein kinase C, iota
PRKCQ protein kinase C, theta
PRSS1 protease, serine, 1 (trypsin 1)
PTHLH parathyroid hormone-like hormone
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
PTPN7 protein tyrosine phosphatase, non-receptor type 7
PTPRR protein tyrosine phosphatase, receptor type, R
RAD9A RAD9 homolog A (S. pombe)
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RB1 retinoblastoma 1
RBBP8 retinoblastoma binding protein 8
RBL1 retinoblastoma-like 1
RET ret proto-oncogene
RND3 Rho family GTPase 3
RPS6 ribosomal protein S6
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1
RYR1 ryanodine receptor 1 (skeletal)
SLN sarcolipin
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
SORT1 sortilin 1
SPIN1 spindlin 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SYK spleen tyrosine kinase
TCAP titin-cap
TEK TEK tyrosine kinase, endothelial
TLR5 toll-like receptor 5
TMEM173 transmembrane protein 173
TNNI3 troponin I type 3 (cardiac)
TP53BP1 tumor protein p53 binding protein 1
TTC5 tetratricopeptide repeat domain 5
TTN titin
VAV1 vav 1 guanine nucleotide exchange factor
VCP valosin containing protein
YAP1 Yes-associated protein 1