degraded Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

234 genes co-occuring with the biological term degraded in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ADAM17 ADAM metallopeptidase domain 17
AMD1 adenosylmethionine decarboxylase 1
ANAPC1 anaphase promoting complex subunit 1
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOBEC3H apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
ARID3A AT rich interactive domain 3A (BRIGHT-like)
ATP13A2 ATPase type 13A2
ATXN3 ataxin 3
ATXN7 ataxin 7
AURKAIP1 aurora kinase A interacting protein 1
AVP arginine vasopressin
AXIN1 axin 1
AZIN2 antizyme inhibitor 2
BACE1 beta-site APP-cleaving enzyme 1
BAD BCL2-associated agonist of cell death
BBC3 BCL2 binding component 3
BCL2L1 BCL2-like 1
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BDKRB2 bradykinin receptor B2
BDNF brain-derived neurotrophic factor
BIK BCL2-interacting killer (apoptosis-inducing)
BIRC3 baculoviral IAP repeat containing 3
BLM Bloom syndrome, RecQ helicase-like
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BTG1 B-cell translocation gene 1, anti-proliferative
BTG2 BTG family, member 2
BTRC beta-transducin repeat containing E3 ubiquitin protein ligase
CALCRL calcitonin receptor-like
CAPN3 calpain 3, (p94)
CAV1 caveolin 1, caveolae protein, 22kDa
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase
CCL20 chemokine (C-C motif) ligand 20
CCND3 cyclin D3
CCR6 chemokine (C-C motif) receptor 6
CD163 CD163 molecule
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain
CDC20 cell division cycle 20
CDC34 cell division cycle 34
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDK2 cyclin-dependent kinase 2
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDT1 chromatin licensing and DNA replication factor 1
CEBPG CCAAT/enhancer binding protein (C/EBP), gamma
COL10A1 collagen, type X, alpha 1
COL1A1 collagen, type I, alpha 1
COL1A2 collagen, type I, alpha 2
COL3A1 collagen, type III, alpha 1
CREB3L1 cAMP responsive element binding protein 3-like 1
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CUL4A cullin 4A
CYTIP cytohesin 1 interacting protein
DAO D-amino-acid oxidase
DAOA D-amino acid oxidase activator
DDB1 damage-specific DNA binding protein 1, 127kDa
DDIT3 DNA-damage-inducible transcript 3
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DIABLO diablo, IAP-binding mitochondrial protein
DIAPH3 diaphanous-related formin 3
DLC1 DLC1 Rho GTPase activating protein
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DTL denticleless E3 ubiquitin protein ligase homolog (Drosophila)
DVL2 dishevelled segment polarity protein 2
EDEM1 ER degradation enhancer, mannosidase alpha-like 1
EFNB1 ephrin-B1
EGFR epidermal growth factor receptor
ELANE elastase, neutrophil expressed
ELN elastin
EP300 E1A binding protein p300
EPO erythropoietin
EPOR erythropoietin receptor
ERBB2 erb-b2 receptor tyrosine kinase 2
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
EYA1 EYA transcriptional coactivator and phosphatase 1
F12 coagulation factor XII (Hageman factor)
F13A1 coagulation factor XIII, A1 polypeptide
FANCM Fanconi anemia, complementation group M
FBXW5 F-box and WD repeat domain containing 5
FGG fibrinogen gamma chain
FLVCR1 feline leukemia virus subgroup C cellular receptor 1
FN1 fibronectin 1
FOS FBJ murine osteosarcoma viral oncogene homolog
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila)
G6PC2 glucose-6-phosphatase, catalytic, 2
GAB1 GRB2-associated binding protein 1
GAPDH glyceraldehyde-3-phosphate dehydrogenase
GIP gastric inhibitory polypeptide
GLRA1 glycine receptor, alpha 1
GMNN geminin, DNA replication inhibitor
GNA15 guanine nucleotide binding protein (G protein), alpha 15 (Gq class)
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GNAS GNAS complex locus
GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
GPC1 glypican 1
GSPT1 G1 to S phase transition 1
HAMP hepcidin antimicrobial peptide
HBB hemoglobin, beta
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HMGB1 high mobility group box 1
HPGDS hematopoietic prostaglandin D synthase
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1
HSPB1 heat shock 27kDa protein 1
HUS1 HUS1 checkpoint homolog (S. pombe)
IER3 immediate early response 3
IFIH1 interferon induced with helicase C domain 1
IGF1 insulin-like growth factor 1 (somatomedin C)
IGFBP3 insulin-like growth factor binding protein 3
IL1B interleukin 1, beta
IL24 interleukin 24
ING1 inhibitor of growth family, member 1
ING3 inhibitor of growth family, member 3
IRAK1 interleukin-1 receptor-associated kinase 1
IRS2 insulin receptor substrate 2
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
ITPA inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
KCNC3 potassium channel, voltage gated Shaw related subfamily C, member 3
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2
KISS1R KISS1 receptor
KLF4 Kruppel-like factor 4 (gut)
KLF5 Kruppel-like factor 5 (intestinal)
LCK LCK proto-oncogene, Src family tyrosine kinase
LIPC lipase, hepatic
LONP1 lon peptidase 1, mitochondrial
LONP2 lon peptidase 2, peroxisomal
LRP1 low density lipoprotein receptor-related protein 1
LTF lactotransferrin
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast)
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha
MAPK8 mitogen-activated protein kinase 8
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5
MAPT microtubule-associated protein tau
MBP myelin basic protein
MCL1 myeloid cell leukemia 1
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MDM4 MDM4, p53 regulator
MEN1 multiple endocrine neoplasia I
MET MET proto-oncogene, receptor tyrosine kinase
MMP3 matrix metallopeptidase 3
MORF4 mortality factor 4 (pseudogene)
MYBPC3 myosin binding protein C, cardiac
NAE1 NEDD8 activating enzyme E1 subunit 1
NBN nibrin
NEK2 NIMA-related kinase 2
NFE2L2 nuclear factor, erythroid 2-like 2
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1
NPDC1 neural proliferation, differentiation and control, 1
NPR3 natriuretic peptide receptor 3
NQO1 NAD(P)H dehydrogenase, quinone 1
NR4A1 nuclear receptor subfamily 4, group A, member 1
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
OMA1 OMA1 zinc metallopeptidase
OVCA2 ovarian tumor suppressor candidate 2
PARK2 parkin RBR E3 ubiquitin protein ligase
PARK7 parkinson protein 7
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor)
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PEX7 peroxisomal biogenesis factor 7
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
PINK1 PTEN induced putative kinase 1
PLCG1 phospholipase C, gamma 1
PLTP phospholipid transfer protein
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1
POLH polymerase (DNA directed), eta
PPARG peroxisome proliferator-activated receptor gamma
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PRKCSH protein kinase C substrate 80K-H
PROS1 protein S (alpha)
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PTTG1 pituitary tumor-transforming 1
PTX3 pentraxin 3, long
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C)
RAMP1 receptor (G protein-coupled) activity modifying protein 1
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
RFWD2 ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
RNF2 ring finger protein 2
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1
S100A8 S100 calcium binding protein A8
S100A9 S100 calcium binding protein A9
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SCYL1 SCY1-like 1 (S. cerevisiae)
SFTPA2 surfactant protein A2
SKP1 S-phase kinase-associated protein 1
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
SLBP stem-loop binding protein
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SP1 Sp1 transcription factor
SP100 SP100 nuclear antigen
SPATA18 spermatogenesis associated 18
SPRN shadow of prion protein homolog (zebrafish)
SQSTM1 sequestosome 1
TARDBP TAR DNA binding protein
TF transferrin
TFAM transcription factor A, mitochondrial
TGFB1 transforming growth factor, beta 1
TGFBI transforming growth factor, beta-induced, 68kDa
TMEM173 transmembrane protein 173
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNRC6A trinucleotide repeat containing 6A
TOB1 transducer of ERBB2, 1
TOB2 transducer of ERBB2, 2
TOP1 topoisomerase (DNA) I
TOPBP1 topoisomerase (DNA) II binding protein 1
TP53 tumor protein p53
TP63 tumor protein p63
TP73 tumor protein p73
TRAF6 TNF receptor-associated factor 6, E3 ubiquitin protein ligase
TRIM32 tripartite motif containing 32
TWIST1 twist family bHLH transcription factor 1
UBB ubiquitin B
UBD ubiquitin D
UBE3A ubiquitin protein ligase E3A
UBE3C ubiquitin protein ligase E3C
UBQLN1 ubiquilin 1
USP37 ubiquitin specific peptidase 37
VIM vimentin
VWF von Willebrand factor
WDFY3 WD repeat and FYVE domain containing 3
XRN2 5'-3' exoribonuclease 2
ZC3HC1 zinc finger, C3HC-type containing 1