deposition Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

267 genes co-occuring with the biological term deposition in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ACHE acetylcholinesterase (Yt blood group)
ADAMTSL4 ADAMTS-like 4
ADIPOQ adiponectin, C1Q and collagen domain containing
ADORA2B adenosine A2b receptor
AKR1C2 aldo-keto reductase family 1, member C2
ALOX12 arachidonate 12-lipoxygenase
ALOX15 arachidonate 15-lipoxygenase
ALPL alkaline phosphatase, liver/bone/kidney
ANKH ANKH inorganic pyrophosphate transport regulator
ANO5 anoctamin 5
ANXA2 annexin A2
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1
APOA1 apolipoprotein A-I
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
AQP1 aquaporin 1 (Colton blood group)
ARC activity-regulated cytoskeleton-associated protein
ARF4 ADP-ribosylation factor 4
ARF5 ADP-ribosylation factor 5
ARG1 arginase 1
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
B2M beta-2-microglobulin
BACE1 beta-site APP-cleaving enzyme 1
BCHE butyrylcholinesterase
BMP2 bone morphogenetic protein 2
BMP4 bone morphogenetic protein 4
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase)
BRAF B-Raf proto-oncogene, serine/threonine kinase
BSG basigin (Ok blood group)
C1QA complement component 1, q subcomponent, A chain
C3 complement component 3
C4A complement component 4A (Rodgers blood group)
C4B complement component 4B (Chido blood group)
C5 complement component 5
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit
CAV1 caveolin 1, caveolae protein, 22kDa
CBX3 chromobox homolog 3
CBX5 chromobox homolog 5
CCL2 chemokine (C-C motif) ligand 2
CCND1 cyclin D1
CD14 CD14 molecule
CD36 CD36 molecule (thrombospondin receptor)
CD4 CD4 molecule
CD40 CD40 molecule, TNF receptor superfamily member 5
CD44 CD44 molecule (Indian blood group)
CD46 CD46 molecule, complement regulatory protein
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group)
CD59 CD59 molecule, complement regulatory protein
CDK1 cyclin-dependent kinase 1
CENPA centromere protein A
CENPH centromere protein H
CENPI centromere protein I
CFH complement factor H
CHAF1A chromatin assembly factor 1, subunit A (p150)
CHD1 chromodomain helicase DNA binding protein 1
CHGA chromogranin A
CHMP2B charged multivesicular body protein 2B
CIDEA cell death-inducing DFFA-like effector a
COL18A1 collagen, type XVIII, alpha 1
COL2A1 collagen, type II, alpha 1
COL3A1 collagen, type III, alpha 1
COL4A1 collagen, type IV, alpha 1
COMP cartilage oligomeric matrix protein
CP ceruloplasmin (ferroxidase)
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CR2 complement component (3d/Epstein Barr virus) receptor 2
CRH corticotropin releasing hormone
CRP C-reactive protein, pentraxin-related
CRYGD crystallin, gamma D
CST3 cystatin C
CTHRC1 collagen triple helix repeat containing 1
CTNNA3 catenin (cadherin-associated protein), alpha 3
CTSG cathepsin G
CTSK cathepsin K
CUL4A cullin 4A
CXCL10 chemokine (C-X-C motif) ligand 10
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DAXX death-domain associated protein
DCN decorin
DDAH1 dimethylarginine dimethylaminohydrolase 1
DHCR24 24-dehydrocholesterol reductase
DKK1 dickkopf WNT signaling pathway inhibitor 1
DYM dymeclin
EDN1 endothelin 1
EFEMP2 EGF containing fibulin-like extracellular matrix protein 2
ELN elastin
ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1
F13A1 coagulation factor XIII, A1 polypeptide
F2RL1 coagulation factor II (thrombin) receptor-like 1
F3 coagulation factor III (thromboplastin, tissue factor)
FBLN5 fibulin 5
FBN1 fibrillin 1
FCN3 ficolin (collagen/fibrinogen domain containing) 3
FERMT2 fermitin family member 2
FGF23 fibroblast growth factor 23
FGF7 fibroblast growth factor 7
FGG fibrinogen gamma chain
FMOD fibromodulin
FN1 fibronectin 1
FTO fat mass and obesity associated
GBA glucosidase, beta, acid
GHRL ghrelin/obestatin prepropeptide
GLB1 galactosidase, beta 1
GP6 glycoprotein VI (platelet)
H2AFY H2A histone family, member Y
H3F3A H3 histone, family 3A
H3F3B H3 histone, family 3B (H3.3B)
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
HAS2 hyaluronan synthase 2
HAS3 hyaluronan synthase 3
HBB hemoglobin, beta
HFE hemochromatosis
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HIRA histone cell cycle regulator
HIST3H3 histone cluster 3, H3
HJURP Holliday junction recognition protein
HMOX1 heme oxygenase 1
HOXD3 homeobox D3
HP haptoglobin
HPSE heparanase
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HSPG2 heparan sulfate proteoglycan 2
HTT huntingtin
IAPP islet amyloid polypeptide
IDE insulin-degrading enzyme
IFNA2 interferon, alpha 2
IGFBP3 insulin-like growth factor binding protein 3
IGFBP5 insulin-like growth factor binding protein 5
IGHA1 immunoglobulin heavy constant alpha 1
IL11 interleukin 11
IL12A interleukin 12A
IL17A interleukin 17A
IL17F interleukin 17F
IL18 interleukin 18
IL6 interleukin 6
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
ITGA6 integrin, alpha 6
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB4 integrin, beta 4
ITM2B integral membrane protein 2B
LAMA3 laminin, alpha 3
LHB luteinizing hormone beta polypeptide
LMAN1 lectin, mannose-binding, 1
LOX lysyl oxidase
LOXL1 lysyl oxidase-like 1
LPA lipoprotein, Lp(a)
LRP1 low density lipoprotein receptor-related protein 1
LRP5 low density lipoprotein receptor-related protein 5
LRRK2 leucine-rich repeat kinase 2
LTBP1 latent transforming growth factor beta binding protein 1
LTBP2 latent transforming growth factor beta binding protein 2
LTBP3 latent transforming growth factor beta binding protein 3
LTBP4 latent transforming growth factor beta binding protein 4
LYZ lysozyme
MAP2K1 mitogen-activated protein kinase kinase 1
MAP2K2 mitogen-activated protein kinase kinase 2
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MAPT microtubule-associated protein tau
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
MASP2 mannan-binding lectin serine peptidase 2
MBL2 mannose-binding lectin (protein C) 2, soluble
MBP myelin basic protein
MC4R melanocortin 4 receptor
MCAM melanoma cell adhesion molecule
MEP1A meprin A, alpha (PABA peptide hydrolase)
MEP1B meprin A, beta
MFAP2 microfibrillar-associated protein 2
MGP matrix Gla protein
MIR29B1 microRNA 29b-1
MMP13 matrix metallopeptidase 13
MMP2 matrix metallopeptidase 2
MMP3 matrix metallopeptidase 3
MMP9 matrix metallopeptidase 9
MRC2 mannose receptor, C type 2
MYH10 myosin, heavy chain 10, non-muscle
NFASC neurofascin
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NFYB nuclear transcription factor Y, beta
NLRP3 NLR family, pyrin domain containing 3
NOS2 nitric oxide synthase 2, inducible
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1
PARK2 parkin RBR E3 ubiquitin protein ligase
PCOLCE procollagen C-endopeptidase enhancer
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PF4 platelet factor 4
PHF1 PHD finger protein 1
PLAT plasminogen activator, tissue
PLIN2 perilipin 2
PLK1 polo-like kinase 1
PNPLA3 patatin-like phospholipase domain containing 3
PON1 paraoxonase 1
PPARG peroxisome proliferator-activated receptor gamma
PRNP prion protein
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PROZ protein Z, vitamin K-dependent plasma glycoprotein
PSEN1 presenilin 1
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTH parathyroid hormone
PTX3 pentraxin 3, long
RAB5A RAB5A, member RAS oncogene family
RAG1 recombination activating gene 1
RAI1 retinoic acid induced 1
RNF168 ring finger protein 168, E3 ubiquitin protein ligase
RNF8 ring finger protein 8, E3 ubiquitin protein ligase
RTN3 reticulon 3
RUNX1 runt-related transcription factor 1
RUNX2 runt-related transcription factor 2
RYR3 ryanodine receptor 3
S100A8 S100 calcium binding protein A8
S100A9 S100 calcium binding protein A9
SAA1 serum amyloid A1
SDC2 syndecan 2
SDC4 syndecan 4
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SETDB2 SET domain, bifurcated 2
SFTPC surfactant protein C
SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SGK1 serum/glucocorticoid regulated kinase 1
SIRT2 sirtuin 2
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3
SLC26A2 solute carrier family 26 (anion exchanger), member 2
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOST sclerostin
SOX9 SRY (sex determining region Y)-box 9
SP1 Sp1 transcription factor
SPP1 secreted phosphoprotein 1
SRCAP Snf2-related CREBBP activator protein
SREBF1 sterol regulatory element binding transcription factor 1
SREBF2 sterol regulatory element binding transcription factor 2
SSRP1 structure specific recognition protein 1
SST somatostatin
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
TARDBP TAR DNA binding protein
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TFR2 transferrin receptor 2
TFRC transferrin receptor
TGFB1 transforming growth factor, beta 1
TGFBI transforming growth factor, beta-induced, 68kDa
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TGM2 transglutaminase 2
THBD thrombomodulin
THBS1 thrombospondin 1
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP2 TIMP metallopeptidase inhibitor 2
TIMP3 TIMP metallopeptidase inhibitor 3
TNC tenascin C
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNXB tenascin XB
TP63 tumor protein p63
TRD T cell receptor delta locus
TRIM28 tripartite motif containing 28
TTR transthyretin
UBB ubiquitin B
UBIAD1 UbiA prenyltransferase domain containing 1
VEGFA vascular endothelial growth factor A
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
ZNF274 zinc finger protein 274