| Dataset | CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis) |
| Similar Terms | |
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199 genes differentially expressed following the doxycycline-3479 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| A1CF | APOBEC1 complementation factor |
| ABCB9 | ATP-binding cassette, sub-family B (MDR/TAP), member 9 |
| ACRV1 | acrosomal vesicle protein 1 |
| ARFGEF2 | ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) |
| ARG1 | arginase 1 |
| ASAP3 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 |
| BTBD7 | BTB (POZ) domain containing 7 |
| C19ORF73 | chromosome 19 open reading frame 73 |
| CCDC6 | coiled-coil domain containing 6 |
| CDC25C | cell division cycle 25C |
| CLCF1 | cardiotrophin-like cytokine factor 1 |
| CLN8 | ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) |
| COMMD4 | COMM domain containing 4 |
| CRIP1 | cysteine-rich protein 1 (intestinal) |
| CXCR2 | chemokine (C-X-C motif) receptor 2 |
| DDX58 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 |
| DENND4A | DENN/MADD domain containing 4A |
| DGCR2 | DiGeorge syndrome critical region gene 2 |
| DIDO1 | death inducer-obliterator 1 |
| DIP2A | DIP2 disco-interacting protein 2 homolog A (Drosophila) |
| DNAAF1 | dynein, axonemal, assembly factor 1 |
| DSCR3 | Down syndrome critical region 3 |
| EPHX2 | epoxide hydrolase 2, cytoplasmic |
| EPOR | erythropoietin receptor |
| FAM46C | family with sequence similarity 46, member C |
| FGFR4 | fibroblast growth factor receptor 4 |
| FSTL3 | follistatin-like 3 (secreted glycoprotein) |
| FUT4 | fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) |
| GM2A | GM2 ganglioside activator |
| GNE | glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase |
| GOLGA4 | golgin A4 |
| HLCS | holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) |
| IFI6 | interferon, alpha-inducible protein 6 |
| IFT140 | intraflagellar transport 140 |
| IGFBP5 | insulin-like growth factor binding protein 5 |
| IL2 | interleukin 2 |
| INADL | InaD-like (Drosophila) |
| ITM2C | integral membrane protein 2C |
| KCTD13 | potassium channel tetramerization domain containing 13 |
| KDM4C | lysine (K)-specific demethylase 4C |
| KIAA0930 | KIAA0930 |
| KLF3 | Kruppel-like factor 3 (basic) |
| KLF9 | Kruppel-like factor 9 |
| LAMP1 | lysosomal-associated membrane protein 1 |
| LRCH3 | leucine-rich repeats and calponin homology (CH) domain containing 3 |
| MAP4 | microtubule-associated protein 4 |
| MAPK14 | mitogen-activated protein kinase 14 |
| MARC2 | mitochondrial amidoxime reducing component 2 |
| MED18 | mediator complex subunit 18 |
| MEFV | Mediterranean fever |
| METTL7A | methyltransferase like 7A |
| MOCS1 | molybdenum cofactor synthesis 1 |
| MPZL2 | myelin protein zero-like 2 |
| MSL3 | male-specific lethal 3 homolog (Drosophila) |
| MYO1D | myosin ID |
| NAB2 | NGFI-A binding protein 2 (EGR1 binding protein 2) |
| NACA2 | nascent polypeptide-associated complex alpha subunit 2 |
| NF1 | neurofibromin 1 |
| NRF1 | nuclear respiratory factor 1 |
| OLFML2A | olfactomedin-like 2A |
| PCDH9 | protocadherin 9 |
| PCDHA6 | protocadherin alpha 6 |
| PDCD4 | programmed cell death 4 (neoplastic transformation inhibitor) |
| POMT2 | protein-O-mannosyltransferase 2 |
| PPFIBP2 | PTPRF interacting protein, binding protein 2 (liprin beta 2) |
| PSMB2 | proteasome (prosome, macropain) subunit, beta type, 2 |
| PTDSS2 | phosphatidylserine synthase 2 |
| PTPN21 | protein tyrosine phosphatase, non-receptor type 21 |
| PTPRM | protein tyrosine phosphatase, receptor type, M |
| RCBTB2 | regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 |
| RNF19B | ring finger protein 19B |
| RPL13 | ribosomal protein L13 |
| SKIV2L | superkiller viralicidic activity 2-like (S. cerevisiae) |
| SLC23A2 | solute carrier family 23 (ascorbic acid transporter), member 2 |
| SLC24A3 | solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 |
| SLC44A1 | solute carrier family 44 (choline transporter), member 1 |
| SLC7A1 | solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 |
| SMC4 | structural maintenance of chromosomes 4 |
| SOCS3 | suppressor of cytokine signaling 3 |
| SORBS1 | sorbin and SH3 domain containing 1 |
| SOX13 | SRY (sex determining region Y)-box 13 |
| SOX9 | SRY (sex determining region Y)-box 9 |
| SSBP1 | single-stranded DNA binding protein 1, mitochondrial |
| ST3GAL2 | ST3 beta-galactoside alpha-2,3-sialyltransferase 2 |
| THNSL1 | threonine synthase-like 1 (S. cerevisiae) |
| TLR2 | toll-like receptor 2 |
| TMEM120B | transmembrane protein 120B |
| TMEM19 | transmembrane protein 19 |
| TNFRSF25 | tumor necrosis factor receptor superfamily, member 25 |
| TRABD | TraB domain containing |
| TRAF2 | TNF receptor-associated factor 2 |
| UPK3B | uroplakin 3B |
| XRCC2 | X-ray repair complementing defective repair in Chinese hamster cells 2 |
| ZHX3 | zinc fingers and homeoboxes 3 |
| ZMYM6 | zinc finger, MYM-type 6 |
| ZNF3 | zinc finger protein 3 |
| ZNF574 | zinc finger protein 574 |
| ZNF589 | zinc finger protein 589 |
| ZNF862 | zinc finger protein 862 |
| Symbol | Name |
|---|---|
| AAAS | achalasia, adrenocortical insufficiency, alacrimia |
| AGPAT3 | 1-acylglycerol-3-phosphate O-acyltransferase 3 |
| ANKFY1 | ankyrin repeat and FYVE domain containing 1 |
| ARHGDIB | Rho GDP dissociation inhibitor (GDI) beta |
| ASPSCR1 | alveolar soft part sarcoma chromosome region, candidate 1 |
| B9D2 | B9 protein domain 2 |
| BAP1 | BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) |
| BCORL1 | BCL6 corepressor-like 1 |
| BFSP1 | beaded filament structural protein 1, filensin |
| BIK | BCL2-interacting killer (apoptosis-inducing) |
| BTBD2 | BTB (POZ) domain containing 2 |
| C19ORF40 | chromosome 19 open reading frame 40 |
| C5ORF45 | chromosome 5 open reading frame 45 |
| CAMTA2 | calmodulin binding transcription activator 2 |
| CAPG | capping protein (actin filament), gelsolin-like |
| CASZ1 | castor zinc finger 1 |
| CCDC69 | coiled-coil domain containing 69 |
| CDK20 | cyclin-dependent kinase 20 |
| CDKN2AIP | CDKN2A interacting protein |
| CHST7 | carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 |
| CLCN2 | chloride channel, voltage-sensitive 2 |
| CLN6 | ceroid-lipofuscinosis, neuronal 6, late infantile, variant |
| CLSPN | claspin |
| CRYL1 | crystallin, lambda 1 |
| CTAGE9 | CTAGE family, member 9 |
| DCUN1D2 | DCN1, defective in cullin neddylation 1, domain containing 2 |
| DLEU2 | deleted in lymphocytic leukemia 2 (non-protein coding) |
| EDAR | ectodysplasin A receptor |
| EGLN3 | egl-9 family hypoxia-inducible factor 3 |
| EPHA2 | EPH receptor A2 |
| ERMAP | erythroblast membrane-associated protein (Scianna blood group) |
| FA2H | fatty acid 2-hydroxylase |
| FBXO22 | F-box protein 22 |
| FOXJ2 | forkhead box J2 |
| GCNT2 | glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) |
| GID4 | GID complex subunit 4 |
| GNA14 | guanine nucleotide binding protein (G protein), alpha 14 |
| GUCY1B2 | guanylate cyclase 1, soluble, beta 2 (pseudogene) |
| HERC6 | HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 |
| HIST1H2AJ | histone cluster 1, H2aj |
| HLA-J | major histocompatibility complex, class I, J (pseudogene) |
| HMHA1 | histocompatibility (minor) HA-1 |
| IMPDH1 | IMP (inosine 5'-monophosphate) dehydrogenase 1 |
| JMJD4 | jumonji domain containing 4 |
| KCNK15 | potassium channel, two pore domain subfamily K, member 15 |
| KCNS3 | potassium voltage-gated channel, modifier subfamily S, member 3 |
| KIAA0355 | KIAA0355 |
| KIF13B | kinesin family member 13B |
| KIZ | kizuna centrosomal protein |
| KLHL26 | kelch-like family member 26 |
| LIME1 | Lck interacting transmembrane adaptor 1 |
| LMO2 | LIM domain only 2 (rhombotin-like 1) |
| LPAR4 | lysophosphatidic acid receptor 4 |
| LRRC61 | leucine rich repeat containing 61 |
| LY6D | lymphocyte antigen 6 complex, locus D |
| MAP4K2 | mitogen-activated protein kinase kinase kinase kinase 2 |
| MBNL3 | muscleblind-like splicing regulator 3 |
| MMP15 | matrix metallopeptidase 15 (membrane-inserted) |
| MNX1 | motor neuron and pancreas homeobox 1 |
| MUL1 | mitochondrial E3 ubiquitin protein ligase 1 |
| NEK11 | NIMA-related kinase 11 |
| NFKBIB | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta |
| NPFFR1 | neuropeptide FF receptor 1 |
| NPIPB15 | nuclear pore complex interacting protein family, member B15 |
| OSMR | oncostatin M receptor |
| OXTR | oxytocin receptor |
| PAIP2B | poly(A) binding protein interacting protein 2B |
| PARD6A | par-6 family cell polarity regulator alpha |
| PIGZ | phosphatidylinositol glycan anchor biosynthesis, class Z |
| PIP5K1C | phosphatidylinositol-4-phosphate 5-kinase, type I, gamma |
| PLEKHB1 | pleckstrin homology domain containing, family B (evectins) member 1 |
| PRSS16 | protease, serine, 16 (thymus) |
| PTTG3P | pituitary tumor-transforming 3, pseudogene |
| RFTN1 | raftlin, lipid raft linker 1 |
| RHPN1-AS1 | RHPN1 antisense RNA 1 (head to head) |
| SCN1B | sodium channel, voltage gated, type I beta subunit |
| SERPINF1 | serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 |
| SGTA | small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha |
| SH2B3 | SH2B adaptor protein 3 |
| SIX1 | SIX homeobox 1 |
| SKA1 | spindle and kinetochore associated complex subunit 1 |
| SLCO4A1 | solute carrier organic anion transporter family, member 4A1 |
| SOWAHC | sosondowah ankyrin repeat domain family member C |
| SOX3 | SRY (sex determining region Y)-box 3 |
| SYT17 | synaptotagmin XVII |
| TBC1D17 | TBC1 domain family, member 17 |
| TCTA | T-cell leukemia translocation altered |
| TIMM50 | translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) |
| TMEM39B | transmembrane protein 39B |
| TNFRSF11A | tumor necrosis factor receptor superfamily, member 11a, NFKB activator |
| TTC30A | tetratricopeptide repeat domain 30A |
| UBQLN4 | ubiquilin 4 |
| UBXN6 | UBX domain protein 6 |
| VPS33A | vacuolar protein sorting 33 homolog A (S. cerevisiae) |
| XRCC1 | X-ray repair complementing defective repair in Chinese hamster cells 1 |
| ZNF226 | zinc finger protein 226 |
| ZNF250 | zinc finger protein 250 |
| ZNF444 | zinc finger protein 444 |
| ZNF532 | zinc finger protein 532 |
| ZNF8 | zinc finger protein 8 |
