dubm complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A protein complex that forms part of SAGA-type complexes SAGA and SLIK, and mediates deubiquitination of histone H2B. In S. cerevisiae, the DUBm consists of the proteins Ubp8p, Sgf11p, Sus1p, and Sgf73p. (Gene Ontology, GO_0071819)
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38 proteins co-occuring with the dubm complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ATXN7L3 ataxin 7-like 3 1.81781
USP22 ubiquitin specific peptidase 22 1.74574
ATXN7 ataxin 7 1.48645
ENY2 enhancer of yellow 2 homolog (Drosophila) 1.33848
ZNF763 zinc finger protein 763 1.22257
ZNF569 zinc finger protein 569 1.22257
ZNF501 zinc finger protein 501 1.22257
ZNF629 zinc finger protein 629 1.22257
ZNF44 zinc finger protein 44 1.21997
BCL6B B-cell CLL/lymphoma 6, member B 1.21273
ZNF436 zinc finger protein 436 1.19211
ZNF135 zinc finger protein 135 0.981473
TREX2 three prime repair exonuclease 2 0.965512
ZKSCAN7 zinc finger with KRAB and SCAN domains 7 0.910647
HIST2H2BF histone cluster 2, H2bf 0.882399
HIST1H2BH histone cluster 1, H2bh 0.882399
HIST3H2BB histone cluster 3, H2bb 0.882399
HIST1H2BD histone cluster 1, H2bd 0.881938
HIST1H2BF histone cluster 1, H2bf 0.880555
HIST1H2BC histone cluster 1, H2bc 0.880555
HIST1H2BA histone cluster 1, H2ba 0.879173
BCL6 B-cell CLL/lymphoma 6 0.82863
CCDC101 coiled-coil domain containing 101 0.813028
SETD1A SET domain containing 1A 0.365095
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 0.235249
HIST1H2AD histone cluster 1, H2ad 0.180634
HIST1H2AJ histone cluster 1, H2aj 0.180634
H2AFJ H2A histone family, member J 0.180634
HIST1H2AH histone cluster 1, H2ah 0.180339
HIST1H2AM histone cluster 1, H2am 0.180339
HIST1H2AG histone cluster 1, H2ag 0.179459
H2AFY2 H2A histone family, member Y2 0.178011
HIST1H2AE histone cluster 1, H2ae 0.177724
HIST1H2AB histone cluster 1, H2ab 0.177724
H2AFV H2A histone family, member V 0.177439
H2AFB1 H2A histone family, member B1 0.175188
H2AFB2 H2A histone family, member B2 0.173003
H2AFY H2A histone family, member Y 0.170629