duodenal mucosa Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description The duodenal mucosa (and that of the rest of the intestines) is classified as simple columnar. The cells rest on a basal lamina, which you may be able to make out in this image as a bright line underneath the cells. They sit over the lamina propria, the loose collagenous CT, filled with cells, that constitutes the core of each villus. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000367)
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Genes

178 proteins co-occuring with the tissue duodenal mucosa in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
GAST gastrin 1.96303
TMPRSS15 transmembrane protease, serine 15 1.66657
LCT lactase 1.6136
CCK cholecystokinin 1.58782
CD79A CD79a molecule, immunoglobulin-associated alpha 1.47989
MLN motilin 1.35132
SST somatostatin 1.32235
SLC26A6 solute carrier family 26 (anion exchanger), member 6 1.23138
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 1.15407
S100G S100 calcium binding protein G 1.13191
ALPL alkaline phosphatase, liver/bone/kidney 1.12305
ALPPL2 alkaline phosphatase, placental-like 2 1.12305
ALPP alkaline phosphatase, placental 1.12128
SDF4 stromal cell derived factor 4 1.11066
FTL ferritin, light polypeptide 1.08501
FTH1 ferritin, heavy polypeptide 1 1.07662
CYBRD1 cytochrome b reductase 1 1.0625
TGM2 transglutaminase 2 1.05985
AMY2A amylase, alpha 2A (pancreatic) 1.01725
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) 0.995425
ODC1 ornithine decarboxylase 1 0.972417
VIP vasoactive intestinal peptide 0.959017
HRH2 histamine receptor H2 0.940066
SLC26A3 solute carrier family 26 (anion exchanger), member 3 0.928478
CCL28 chemokine (C-C motif) ligand 28 0.906682
ALPI alkaline phosphatase, intestinal 0.904978
DNAH8 dynein, axonemal, heavy chain 8 0.902424
AKR1E2 aldo-keto reductase family 1, member E2 0.899871
LAP3 leucine aminopeptidase 3 0.878243
LMBR1L limb development membrane protein 1-like 0.8601
GCG glucagon 0.847904
GRP gastrin-releasing peptide 0.837833
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor 0.820248
TF transferrin 0.806465
HTR3E 5-hydroxytryptamine (serotonin) receptor 3E, ionotropic 0.803961
CD4 CD4 molecule 0.799375
XDH xanthine dehydrogenase 0.752057
IGHV1-2 immunoglobulin heavy variable 1-2 0.750405
GKN1 gastrokine 1 0.745039
SLC40A1 solute carrier family 40 (iron-regulated transporter), member 1 0.734323
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.722809
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.720345
TREH trehalase (brush-border membrane glycoprotein) 0.700262
HEPH hephaestin 0.682287
ACO1 aconitase 1, soluble 0.673321
MUC2 mucin 2, oligomeric mucus/gel-forming 0.668843
THEMIS thymocyte selection associated 0.651371
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.649749
CTRL chymotrypsin-like 0.649749
GIP gastric inhibitory polypeptide 0.649344
CHGA chromogranin A 0.633549
GHRL ghrelin/obestatin prepropeptide 0.625061
TBCC tubulin folding cofactor C 0.621428
STC1 stanniocalcin 1 0.61941
INS insulin 0.617393
MIR192 microRNA 192 0.61175
TPH1 tryptophan hydroxylase 1 0.604904
CCKAR cholecystokinin A receptor 0.598871
PIGR polymeric immunoglobulin receptor 0.597263
TFRC transferrin receptor 0.59124
UGT1A3 UDP glucuronosyltransferase 1 family, polypeptide A3 0.572018
MUC6 mucin 6, oligomeric mucus/gel-forming 0.569622
HAMP hepcidin antimicrobial peptide 0.56005
COX17 COX17 cytochrome c oxidase copper chaperone 0.553683
SLC4A5 solute carrier family 4 (sodium bicarbonate cotransporter), member 5 0.553286
FFAR4 free fatty acid receptor 4 0.551298
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 0.550106
UGT1A7 UDP glucuronosyltransferase 1 family, polypeptide A7 0.535438
UGT1A10 UDP glucuronosyltransferase 1 family, polypeptide A10 0.530693
UGT1A5 UDP glucuronosyltransferase 1 family, polypeptide A5 0.529903
UGT1A8 UDP glucuronosyltransferase 1 family, polypeptide A8 0.529903
UGT1A4 UDP glucuronosyltransferase 1 family, polypeptide A4 0.527534
CEMIP cell migration inducing protein, hyaluronan binding 0.526744
KPNA3 karyopherin alpha 3 (importin alpha 4) 0.52635
SI sucrase-isomaltase (alpha-glucosidase) 0.525955
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.522405
TRPV6 transient receptor potential cation channel, subfamily V, member 6 0.518072
CTSG cathepsin G 0.510599
EIF5A2 eukaryotic translation initiation factor 5A2 0.50942
UGT1A9 UDP glucuronosyltransferase 1 family, polypeptide A9 0.508635
MIR31 microRNA 31 0.506672
CXCL17 chemokine (C-X-C motif) ligand 17 0.497266
TAS1R2 taste receptor, type 1, member 2 0.494528
GMDS GDP-mannose 4,6-dehydratase 0.490229
CDX2 caudal type homeobox 2 0.483596
ITGAE integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) 0.471539
CTSW cathepsin W 0.46766
TMPRSS3 transmembrane protease, serine 3 0.465723
COMMD1 copper metabolism (Murr1) domain containing 1 0.464561
MLNR motilin receptor 0.4634
CALB1 calbindin 1, 28kDa 0.461465
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 0.459918
UGT1A1 UDP glucuronosyltransferase 1 family, polypeptide A1 0.459145
SAR1B secretion associated, Ras related GTPase 1B 0.457214
FFAR1 free fatty acid receptor 1 0.45567
TFF1 trefoil factor 1 0.449501
MIR197 microRNA 197 0.447961
CLDN15 claudin 15 0.442194
ATP7A ATPase, Cu++ transporting, alpha polypeptide 0.438356
PPY pancreatic polypeptide 0.437589
RPS18P12 ribosomal protein S18 pseudogene 12 0.431843
GGT1 gamma-glutamyltransferase 1 0.430695
HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled 0.42993
PPIC peptidylprolyl isomerase C (cyclophilin C) 0.427254
RPS18 ribosomal protein S18 0.427254
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9 0.423054
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 0.420766
KIAA1919 KIAA1919 0.415814
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.411631
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary) 0.408212
CASR calcium-sensing receptor 0.407832
CLDN10 claudin 10 0.407832
MUC4 mucin 4, cell surface associated 0.40025
PGC progastricsin (pepsinogen C) 0.398735
APOA4 apolipoprotein A-IV 0.396087
CLDN3 claudin 3 0.394953
COMT catechol-O-methyltransferase 0.394576
PTPRK protein tyrosine phosphatase, receptor type, K 0.390044
EGR1 early growth response 1 0.387027
MADCAM1 mucosal vascular addressin cell adhesion molecule 1 0.379123
PYY peptide YY 0.37087
ARSD arylsulfatase D 0.367129
CLDN2 claudin 2 0.366381
PRDX5 peroxiredoxin 5 0.364139
CAMLG calcium modulating ligand 0.363393
FOXP3 forkhead box P3 0.357058
TAC1 tachykinin, precursor 1 0.356314
GIF gastric intrinsic factor (vitamin B synthesis) 0.35557
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11 0.344818
FOXQ1 forkhead box Q1 0.341863
ARSE arylsulfatase E (chondrodysplasia punctata 1) 0.336704
HFE hemochromatosis 0.334498
NTS neurotensin 0.327896
NASP nuclear autoantigenic sperm protein (histone-binding) 0.323874
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B 0.32205
MUC1 mucin 1, cell surface associated 0.318042
PTH parathyroid hormone 0.316224
AOX1 aldehyde oxidase 1 0.310421
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.308612
MSLN mesothelin 0.308251
CA2 carbonic anhydrase II 0.306083
GPX5 glutathione peroxidase 5 0.305361
CCKBR cholecystokinin B receptor 0.303198
ATOX1 antioxidant 1 copper chaperone 0.303198
RPL32 ribosomal protein L32 0.302838
GPX4 glutathione peroxidase 4 0.301758
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) 0.299242
TMPRSS4 transmembrane protease, serine 4 0.296013
PTK7 protein tyrosine kinase 7 (inactive) 0.291365
GPX1 glutathione peroxidase 1 0.291008
B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 0.283191
SOD2 superoxide dismutase 2, mitochondrial 0.282483
AACS acetoacetyl-CoA synthetase 0.28107
CP ceruloplasmin (ferroxidase) 0.278251
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 0.2723
MGAM maltase-glucoamylase 0.268137
CLC Charcot-Leyden crystal galectin 0.267791
GPR119 G protein-coupled receptor 119 0.267791
MPO myeloperoxidase 0.257907
LYZ lysozyme 0.250953
ATAD3A ATPase family, AAA domain containing 3A 0.249329
RCOR1 REST corepressor 1 0.24804
CAT catalase 0.24676
TJP3 tight junction protein 3 0.245491
NLE1 notchless homolog 1 (Drosophila) 0.241438
CGN cingulin 0.239307
SLC5A4 solute carrier family 5 (glucose activated ion channel), member 4 0.237216
CDH17 cadherin 17, LI cadherin (liver-intestine) 0.228497
HTR4 5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 0.227445
SLPI secretory leukocyte peptidase inhibitor 0.227445
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.226667
MTTP microsomal triglyceride transfer protein 0.224893
EHF ets homologous factor 0.219485
AKAP12 A kinase (PRKA) anchor protein 12 0.219485
TLR4 toll-like receptor 4 0.21573
SOX18 SRY (sex determining region Y)-box 18 0.215147
INHBA inhibin, beta A 0.213471
NOTO notochord homeobox 0.212586