ecm Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

113 genes co-occuring with the biological term ecm in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ACAN aggrecan
ADAM9 ADAM metallopeptidase domain 9
ADAMTSL4 ADAMTS-like 4
ANPEP alanyl (membrane) aminopeptidase
BSG basigin (Ok blood group)
CCL2 chemokine (C-C motif) ligand 2
CCR2 chemokine (C-C motif) receptor 2
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
CHUK conserved helix-loop-helix ubiquitous kinase
CLASP1 cytoplasmic linker associated protein 1
CLASP2 cytoplasmic linker associated protein 2
CLEC3A C-type lectin domain family 3, member A
COL16A1 collagen, type XVI, alpha 1
COL17A1 collagen, type XVII, alpha 1
CTGF connective tissue growth factor
CTSZ cathepsin Z
CTTN cortactin
DPP4 dipeptidyl-peptidase 4
DPP8 dipeptidyl-peptidase 8
DPP9 dipeptidyl-peptidase 9
ECM1 extracellular matrix protein 1
EPAS1 endothelial PAS domain protein 1
ERBB2 erb-b2 receptor tyrosine kinase 2
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
F12 coagulation factor XII (Hageman factor)
FAP fibroblast activation protein, alpha
FGD1 FYVE, RhoGEF and PH domain containing 1
FGF2 fibroblast growth factor 2 (basic)
FN1 fibronectin 1
FNBP1 formin binding protein 1
FPR2 formyl peptide receptor 2
FRAS1 Fraser extracellular matrix complex subunit 1
GREM1 gremlin 1, DAN family BMP antagonist
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
IGF2 insulin-like growth factor 2
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
IL1A interleukin 1, alpha
INS insulin
ITGA1 integrin, alpha 1
ITGAV integrin, alpha V
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
JUN jun proto-oncogene
LARGE like-glycosyltransferase
LOX lysyl oxidase
LOXL4 lysyl oxidase-like 4
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
LUM lumican
MAP2 microtubule-associated protein 2
MAPK7 mitogen-activated protein kinase 7
MATN1 matrilin 1, cartilage matrix protein
MATN4 matrilin 4
MFAP2 microfibrillar-associated protein 2
MFAP4 microfibrillar-associated protein 4
MIR200C microRNA 200c
MIR27B microRNA 27b
MIR29A microRNA 29a
MIR29C microRNA 29c
MMP1 matrix metallopeptidase 1
MMP13 matrix metallopeptidase 13
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP2 matrix metallopeptidase 2
MMP3 matrix metallopeptidase 3
MMP9 matrix metallopeptidase 9
MPO myeloperoxidase
MUC1 mucin 1, cell surface associated
NAPA N-ethylmaleimide-sensitive factor attachment protein, alpha
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NPPB natriuretic peptide B
PDPK1 3-phosphoinositide dependent protein kinase 1
PLAT plasminogen activator, tissue
PLAU plasminogen activator, urokinase
PLAUR plasminogen activator, urokinase receptor
PRL prolactin
PTHLH parathyroid hormone-like hormone
PTK2 protein tyrosine kinase 2
PXN paxillin
QSOX1 quiescin Q6 sulfhydryl oxidase 1
RLN1 relaxin 1
RLN2 relaxin 2
RPSA ribosomal protein SA
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SNAI1 snail family zinc finger 1
SOD3 superoxide dismutase 3, extracellular
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SPP1 secreted phosphoprotein 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
ST14 suppression of tumorigenicity 14 (colon carcinoma)
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
TEX101 testis expressed 101
TGFB1 transforming growth factor, beta 1
TGFB2 transforming growth factor, beta 2
TGFB3 transforming growth factor, beta 3
TGM2 transglutaminase 2
THBS2 thrombospondin 2
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP2 TIMP metallopeptidase inhibitor 2
TIMP3 TIMP metallopeptidase inhibitor 3
TLR3 toll-like receptor 3
TLR4 toll-like receptor 4
TNF tumor necrosis factor
TNS1 tensin 1
VCAN versican
VEGFA vascular endothelial growth factor A
VTN vitronectin
WWTR1 WW domain containing transcription regulator 1
XYLT1 xylosyltransferase I
YAP1 Yes-associated protein 1
YY1AP1 YY1 associated protein 1