endoplasmic reticulum tubular network Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description An endoplasmic reticulum part that comprises the membranes with high curvature in cross-section. (Gene Ontology, GO_0071782)
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Genes

68 proteins co-occuring with the endoplasmic reticulum tubular network cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
KIAA1715 KIAA1715 1.40914
RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 1.32167
MSMP microseminoprotein, prostate associated 1.26551
TMEM33 transmembrane protein 33 1.20911
STIM1 stromal interaction molecule 1 1.13829
LNP1 leukemia NUP98 fusion partner 1 1.11786
SEC16B SEC16 homolog B (S. cerevisiae) 1.03529
RTN4 reticulon 4 1.01288
REEP5 receptor accessory protein 5 0.980501
BORA bora, aurora kinase A activator 0.944482
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase 0.934544
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.89672
ALOX5AP arachidonate 5-lipoxygenase-activating protein 0.86077
OSBPL3 oxysterol binding protein-like 3 0.858933
ATL1 atlastin GTPase 1 0.851583
STIM2 stromal interaction molecule 2 0.842401
REEP1 receptor accessory protein 1 0.8245
SUGP1 SURP and G patch domain containing 1 0.76726
PPBPP1 pro-platelet basic protein pseudogene 1 0.765893
SEC16A SEC16 homolog A (S. cerevisiae) 0.764072
CKAP4 cytoskeleton-associated protein 4 0.723919
ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 0.714126
RAB18 RAB18, member RAS oncogene family 0.658188
BET1 Bet1 golgi vesicular membrane trafficking protein 0.645287
WNT5A wingless-type MMTV integration site family, member 5A 0.644429
RTN1 reticulon 1 0.620104
LMAN1 lectin, mannose-binding, 1 0.578416
TFG TRK-fused gene 0.54606
ORAI1 ORAI calcium release-activated calcium modulator 1 0.544411
PLCD1 phospholipase C, delta 1 0.527979
IMPA1 inositol(myo)-1(or 4)-monophosphatase 1 0.51327
PEX3 peroxisomal biogenesis factor 3 0.486096
SEC63 SEC63 homolog (S. cerevisiae) 0.478038
PAPD7 PAP associated domain containing 7 0.47442
TMEM11 transmembrane protein 11 0.458006
BCAP31 B-cell receptor-associated protein 31 0.451631
STX5 syntaxin 5 0.407529
SEC24B SEC24 family member B 0.40247
DERL1 derlin 1 0.400139
B4GALT6 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 0.383124
OSBP oxysterol binding protein 0.381199
FZD1 frizzled class receptor 1 0.37966
BRSK1 BR serine/threonine kinase 1 0.377354
DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 0.373899
RBP3 retinol binding protein 3, interstitial 0.360896
EXOC3 exocyst complex component 3 0.351762
MYO5A myosin VA (heavy chain 12, myoxin) 0.351382
SCN10A sodium channel, voltage gated, type X alpha subunit 0.348346
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.333225
SEC13 SEC13 homolog (S. cerevisiae) 0.315586
CANX calnexin 0.309986
NSF N-ethylmaleimide-sensitive factor 0.278509
PARD6A par-6 family cell polarity regulator alpha 0.265311
ZYX zyxin 0.253291
DNM1 dynamin 1 0.249664
IQGAP1 IQ motif containing GTPase activating protein 1 0.24894
TRPC1 transient receptor potential cation channel, subfamily C, member 1 0.229888
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.224913
PARK2 parkin RBR E3 ubiquitin protein ligase 0.221378
FKBP1A FK506 binding protein 1A, 12kDa 0.217861
TGOLN2 trans-golgi network protein 2 0.212974
LBR lamin B receptor 0.212974
GPI glucose-6-phosphate isomerase 0.201335
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.183935
VCP valosin containing protein 0.174087
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 0.171149
LTC4S leukotriene C4 synthase 0.168847
EMD emerin 0.159856