extended Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

273 genes co-occuring with the biological term extended in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ACE angiotensin I converting enzyme
ACTN4 actinin, alpha 4
ADORA2A adenosine A2a receptor
AGTR1 angiotensin II receptor, type 1
AGXT alanine-glyoxylate aminotransferase
AHSP alpha hemoglobin stabilizing protein
ALB albumin
ALG2 ALG2, alpha-1,3/1,6-mannosyltransferase
ANKRD30A ankyrin repeat domain 30A
APOA5 apolipoprotein A-V
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
ATF4 activating transcription factor 4
ATR ATR serine/threonine kinase
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
BCAR4 breast cancer anti-estrogen resistance 4 (non-protein coding)
BCHE butyrylcholinesterase
BCL2L1 BCL2-like 1
BRCA1 breast cancer 1, early onset
C2 complement component 2
C3 complement component 3
C5AR2 complement component 5a receptor 2
CA2 carbonic anhydrase II
CACNB1 calcium channel, voltage-dependent, beta 1 subunit
CALCA calcitonin-related polypeptide alpha
CALM1 calmodulin 1 (phosphorylase kinase, delta)
CANT1 calcium activated nucleotidase 1
CAPN2 calpain 2, (m/II) large subunit
CASP1 caspase 1, apoptosis-related cysteine peptidase
CCL21 chemokine (C-C motif) ligand 21
CD209 CD209 molecule
CD247 CD247 molecule
CD274 CD274 molecule
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDK4 cyclin-dependent kinase 4
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDT1 chromatin licensing and DNA replication factor 1
CFB complement factor B
CGB chorionic gonadotropin, beta polypeptide
CLIC1 chloride intracellular channel 1
COL12A1 collagen, type XII, alpha 1
COMT catechol-O-methyltransferase
COTL1 coactosin-like F-actin binding protein 1
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CREB1 cAMP responsive element binding protein 1
CRP C-reactive protein, pentraxin-related
CSF1R colony stimulating factor 1 receptor
CSNK2A1 casein kinase 2, alpha 1 polypeptide
CST3 cystatin C
CTCF CCCTC-binding factor (zinc finger protein)
CTCFL CCCTC-binding factor (zinc finger protein)-like
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CTSK cathepsin K
CXCL12 chemokine (C-X-C motif) ligand 12
CXCR4 chemokine (C-X-C motif) receptor 4
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYP2R1 cytochrome P450, family 2, subfamily R, polypeptide 1
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DHH desert hedgehog
DICER1 dicer 1, ribonuclease type III
DMD dystrophin
DPF2 D4, zinc and double PHD fingers family 2
DPP4 dipeptidyl-peptidase 4
EDN1 endothelin 1
EFHC2 EF-hand domain (C-terminal) containing 2
EGF epidermal growth factor
EGFR epidermal growth factor receptor
EHMT1 euchromatic histone-lysine N-methyltransferase 1
EHMT2 euchromatic histone-lysine N-methyltransferase 2
EP300 E1A binding protein p300
EPO erythropoietin
ERLIN2 ER lipid raft associated 2
ESYT1 extended synaptotagmin-like protein 1
ESYT2 extended synaptotagmin-like protein 2
ESYT3 extended synaptotagmin-like protein 3
F10 coagulation factor X
F2 coagulation factor II (thrombin)
F5 coagulation factor V (proaccelerin, labile factor)
F8 coagulation factor VIII, procoagulant component
F9 coagulation factor IX
FCGR1A Fc fragment of IgG, high affinity Ia, receptor (CD64)
FGA fibrinogen alpha chain
FGF3 fibroblast growth factor 3
FMR1 fragile X mental retardation 1
FOXP3 forkhead box P3
FXN frataxin
FYB FYN binding protein
GAB1 GRB2-associated binding protein 1
GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2
GABRG1 gamma-aminobutyric acid (GABA) A receptor, gamma 1
GAST gastrin
GFER growth factor, augmenter of liver regeneration
GJB2 gap junction protein, beta 2, 26kDa
GJB6 gap junction protein, beta 6, 30kDa
GJC1 gap junction protein, gamma 1, 45kDa
GLRA1 glycine receptor, alpha 1
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
GPI glucose-6-phosphate isomerase
GSTA1 glutathione S-transferase alpha 1
GTF2H2 general transcription factor IIH, polypeptide 2, 44kDa
GTF2H5 general transcription factor IIH, polypeptide 5
HBA1 hemoglobin, alpha 1
HBA2 hemoglobin, alpha 2
HFE2 hemochromatosis type 2 (juvenile)
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIST1H1E histone cluster 1, H1e
HLA-A major histocompatibility complex, class I, A
HLA-B major histocompatibility complex, class I, B
HLA-DPB1 major histocompatibility complex, class II, DP beta 1
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HLA-DRB3 major histocompatibility complex, class II, DR beta 3
HOXB13 homeobox B13
HRAS Harvey rat sarcoma viral oncogene homolog
HSF1 heat shock transcription factor 1
HSPD1 heat shock 60kDa protein 1 (chaperonin)
HTRA2 HtrA serine peptidase 2
ICAM3 intercellular adhesion molecule 3
IER3 immediate early response 3
IFNL3 interferon, lambda 3
IGF1 insulin-like growth factor 1 (somatomedin C)
IL10 interleukin 10
IL17A interleukin 17A
IL17RA interleukin 17 receptor A
IL1B interleukin 1, beta
IL2 interleukin 2
IL20 interleukin 20
IL21 interleukin 21
IL24 interleukin 24
IL6 interleukin 6
IL7 interleukin 7
ILDR1 immunoglobulin-like domain containing receptor 1
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
JAG1 jagged 1
KCNQ1 potassium channel, voltage gated KQT-like subfamily Q, member 1
KDR kinase insert domain receptor
KIF1C kinesin family member 1C
KLF1 Kruppel-like factor 1 (erythroid)
KLK3 kallikrein-related peptidase 3
KMT2A lysine (K)-specific methyltransferase 2A
LAMC1 laminin, gamma 1 (formerly LAMB2)
LCT lactase
LDLR low density lipoprotein receptor
LEPR leptin receptor
LGALS1 lectin, galactoside-binding, soluble, 1
LST1 leukocyte specific transcript 1
LTA lymphotoxin alpha
LTB4R leukotriene B4 receptor
MAP2K1 mitogen-activated protein kinase kinase 1
MAP4 microtubule-associated protein 4
MAPK14 mitogen-activated protein kinase 14
MAPT microtubule-associated protein tau
MARS methionyl-tRNA synthetase
MC4R melanocortin 4 receptor
MDC1 mediator of DNA-damage checkpoint 1
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MED1 mediator complex subunit 1
MET MET proto-oncogene, receptor tyrosine kinase
MICA MHC class I polypeptide-related sequence A
MICB MHC class I polypeptide-related sequence B
MIR133B microRNA 133b
MIR206 microRNA 206
MIR93 microRNA 93
MMP12 matrix metallopeptidase 12
MSH2 mutS homolog 2
MUC17 mucin 17, cell surface associated
MUT methylmalonyl CoA mutase
MYBPC3 myosin binding protein C, cardiac
MYH9 myosin, heavy chain 9, non-muscle
MYO6 myosin VI
N4BP2 NEDD4 binding protein 2
NBN nibrin
NCF2 neutrophil cytosolic factor 2
NDC80 NDC80 kinetochore complex component
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NEFL neurofilament, light polypeptide
NLRP1 NLR family, pyrin domain containing 1
NLRP3 NLR family, pyrin domain containing 3
NOS2 nitric oxide synthase 2, inducible
NPHP3 nephronophthisis 3 (adolescent)
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
OPRM1 opioid receptor, mu 1
ORAI1 ORAI calcium release-activated calcium modulator 1
OXT oxytocin/neurophysin I prepropeptide
PCP4 Purkinje cell protein 4
PCSK9 proprotein convertase subtilisin/kexin type 9
PDCD6IP programmed cell death 6 interacting protein
PI3 peptidase inhibitor 3, skin-derived
PIN4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4
PKD1 polycystic kidney disease 1 (autosomal dominant)
PLK1 polo-like kinase 1
POU4F3 POU class 4 homeobox 3
POU5F1 POU class 5 homeobox 1
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PRPF31 pre-mRNA processing factor 31
PRSS16 protease, serine, 16 (thymus)
PTPRM protein tyrosine phosphatase, receptor type, M
RAB23 RAB23, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RAD51 RAD51 recombinase
RARA retinoic acid receptor, alpha
RASSF5 Ras association (RalGDS/AF-6) domain family member 5
RBBP7 retinoblastoma binding protein 7
RECQL5 RecQ protein-like 5
RET ret proto-oncogene
ROR2 receptor tyrosine kinase-like orphan receptor 2
RSPH9 radial spoke head 9 homolog (Chlamydomonas)
RUNX1 runt-related transcription factor 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
RYR1 ryanodine receptor 1 (skeletal)
RYR2 ryanodine receptor 2 (cardiac)
SCGN secretagogin, EF-hand calcium binding protein
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SELE selectin E
SELP selectin P (granule membrane protein 140kDa, antigen CD62)
SELPLG selectin P ligand
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SFTPD surfactant protein D
SIL1 SIL1 nucleotide exchange factor
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2
SLC6A1 solute carrier family 6 (neurotransmitter transporter), member 1
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SLC9B2 solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
SMN2 survival of motor neuron 2, centromeric
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNX10 sorting nexin 10
SNX11 sorting nexin 11
SOD1 superoxide dismutase 1, soluble
SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like
SPECC1L-ADORA2A SPECC1L-ADORA2A readthrough (NMD candidate)
SPINK5 serine peptidase inhibitor, Kazal type 5
STIM1 stromal interaction molecule 1
STXBP2 syntaxin binding protein 2
SULT2A1 sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1
SUMO1 small ubiquitin-like modifier 1
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
TAP2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
TARDBP TAR DNA binding protein
TERT telomerase reverse transcriptase
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TH tyrosine hydroxylase
TLR4 toll-like receptor 4
TNF tumor necrosis factor
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TNNI3 troponin I type 3 (cardiac)
TP53 tumor protein p53
TP73 tumor protein p73
TRRAP transformation/transcription domain-associated protein
TSC2 tuberous sclerosis 2
TTR transthyretin
U2AF2 U2 small nuclear RNA auxiliary factor 2
UBC ubiquitin C
UBE2D3 ubiquitin-conjugating enzyme E2D 3
UBE2E1 ubiquitin-conjugating enzyme E2E 1
UBE2N ubiquitin-conjugating enzyme E2N
USF1 upstream transcription factor 1
VEGFA vascular endothelial growth factor A
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae)
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma