extract Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

131 genes co-occuring with the biological term extract in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ACACA acetyl-CoA carboxylase alpha
AHR aryl hydrocarbon receptor
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALOX15 arachidonate 15-lipoxygenase
ALOX15B arachidonate 15-lipoxygenase, type B
APC adenomatous polyposis coli
APP amyloid beta (A4) precursor protein
ARG1 arginase 1
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide
BAX BCL2-associated X protein
BCL2 B-cell CLL/lymphoma 2
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3
CANX calnexin
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASP8 caspase 8, apoptosis-related cysteine peptidase
CASP9 caspase 9, apoptosis-related cysteine peptidase
CCL2 chemokine (C-C motif) ligand 2
CCL5 chemokine (C-C motif) ligand 5
CCND1 cyclin D1
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CHEK1 checkpoint kinase 1
CHEK2 checkpoint kinase 2
CLDN4 claudin 4
COL1A1 collagen, type I, alpha 1
COMT catechol-O-methyltransferase
CREB1 cAMP responsive element binding protein 1
CSNK2A1 casein kinase 2, alpha 1 polypeptide
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR4 chemokine (C-X-C motif) receptor 4
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6
CYP3A cytochrome P450, family 3, subfamily A
DDIT3 DNA-damage-inducible transcript 3
EDEM1 ER degradation enhancer, mannosidase alpha-like 1
EDNRB endothelin receptor type B
EGFR epidermal growth factor receptor
ELAVL1 ELAV like RNA binding protein 1
ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1
EP300 E1A binding protein p300
ESR1 estrogen receptor 1
F2RL1 coagulation factor II (thrombin) receptor-like 1
FOS FBJ murine osteosarcoma viral oncogene homolog
GSK3B glycogen synthase kinase 3 beta
GTF2B general transcription factor IIB
HAMP hepcidin antimicrobial peptide
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HMOX1 heme oxygenase 1
HPGDS hematopoietic prostaglandin D synthase
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
ICAM1 intercellular adhesion molecule 1
IFNG interferon, gamma
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL18 interleukin 18
IL1B interleukin 1, beta
IL33 interleukin 33
IL6 interleukin 6
IL9 interleukin 9
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
JUN jun proto-oncogene
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2
KHSRP KH-type splicing regulatory protein
KL klotho
KLK3 kallikrein-related peptidase 3
LDLR low density lipoprotein receptor
LOXL1 lysyl oxidase-like 1
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MAPK8 mitogen-activated protein kinase 8
METAP2 methionyl aminopeptidase 2
MGP matrix Gla protein
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR137 microRNA 137
MIR145 microRNA 145
MIR153-1 microRNA 153-1
MIR181B1 microRNA 181b-1
MIRLET7D microRNA let-7d
MMP1 matrix metallopeptidase 1
MMP2 matrix metallopeptidase 2
MMP3 matrix metallopeptidase 3
MMP9 matrix metallopeptidase 9
MUC16 mucin 16, cell surface associated
NFE2L2 nuclear factor, erythroid 2-like 2
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NOS2 nitric oxide synthase 2, inducible
NPPB natriuretic peptide B
NR1I2 nuclear receptor subfamily 1, group I, member 2
NR1I3 nuclear receptor subfamily 1, group I, member 3
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I
PARP1 poly (ADP-ribose) polymerase 1
PCSK9 proprotein convertase subtilisin/kexin type 9
PGR progesterone receptor
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent)
POLI polymerase (DNA directed) iota
PPARG peroxisome proliferator-activated receptor gamma
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PRKACA protein kinase, cAMP-dependent, catalytic, alpha
PRKCA protein kinase C, alpha
PRPF19 pre-mRNA processing factor 19
PSAP prosaposin
PSIP1 PC4 and SFRS1 interacting protein 1
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTK2 protein tyrosine kinase 2
RAD23B RAD23 homolog B (S. cerevisiae)
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
SELE selectin E
SELL selectin L
SET SET nuclear proto-oncogene
SLPI secretory leukocyte peptidase inhibitor
SMN1 survival of motor neuron 1, telomeric
SMN2 survival of motor neuron 2, centromeric
SNCA synuclein, alpha (non A4 component of amyloid precursor)
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
TERT telomerase reverse transcriptase
TGFB1 transforming growth factor, beta 1
TLR2 toll-like receptor 2
TLR3 toll-like receptor 3
TLR4 toll-like receptor 4
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TP53 tumor protein p53
TUBA1B tubulin, alpha 1b
TXNRD1 thioredoxin reductase 1
U2AF1L4 U2 small nuclear RNA auxiliary factor 1-like 4
UBD ubiquitin D
UBE2K ubiquitin-conjugating enzyme E2K
VEGFA vascular endothelial growth factor A
ZNF443 zinc finger protein 443