favorable Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Similar Terms
Downloads & Tools

Genes

353 genes co-occuring with the biological term favorable in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
ACE angiotensin I converting enzyme
ACE2 angiotensin I converting enzyme 2
ADIPOQ adiponectin, C1Q and collagen domain containing
ADIPOR1 adiponectin receptor 1
ADRA2B adrenoceptor alpha 2B
AHR aryl hydrocarbon receptor
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ALK anaplastic lymphoma receptor tyrosine kinase
AMH anti-Mullerian hormone
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOC3 apolipoprotein C-III
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
AR androgen receptor
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5
ARMS2 age-related maculopathy susceptibility 2
AURKA aurora kinase A
AZGP1 alpha-2-glycoprotein 1, zinc-binding
B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
BAALC brain and acute leukemia, cytoplasmic
BAX BCL2-associated X protein
BCL2 B-cell CLL/lymphoma 2
BCL6 B-cell CLL/lymphoma 6
BECN1 beclin 1, autophagy related
BIRC5 baculoviral IAP repeat containing 5
BMI1 BMI1 proto-oncogene, polycomb ring finger
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
BRE brain and reproductive organ-expressed (TNFRSF1A modulator)
BSG basigin (Ok blood group)
BTG3 BTG family, member 3
CA2 carbonic anhydrase II
CACNA1E calcium channel, voltage-dependent, R type, alpha 1E subunit
CALR calreticulin
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASR calcium-sensing receptor
CCL2 chemokine (C-C motif) ligand 2
CCND1 cyclin D1
CCNE1 cyclin E1
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD4 CD4 molecule
CD40 CD40 molecule, TNF receptor superfamily member 5
CD44 CD44 molecule (Indian blood group)
CD5 CD5 molecule
CDA cytidine deaminase
CDC42 cell division cycle 42
CDC73 cell division cycle 73
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CETP cholesteryl ester transfer protein, plasma
CFH complement factor H
CHD5 chromodomain helicase DNA binding protein 5
CHEK1 checkpoint kinase 1
CHEK2 checkpoint kinase 2
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal)
CISH cytokine inducible SH2-containing protein
CKAP4 cytoskeleton-associated protein 4
CLOCK clock circadian regulator
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen)
COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
COMT catechol-O-methyltransferase
CRP C-reactive protein, pentraxin-related
CRTC1 CREB regulated transcription coactivator 1
CRTC3 CREB regulated transcription coactivator 3
CTGF connective tissue growth factor
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR1 chemokine (C-X-C motif) receptor 1
CXCR2 chemokine (C-X-C motif) receptor 2
CXCR3 chemokine (C-X-C motif) receptor 3
CXCR4 chemokine (C-X-C motif) receptor 4
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8
CYP2J2 cytochrome P450, family 2, subfamily J, polypeptide 2
DDR2 discoidin domain receptor tyrosine kinase 2
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DLC1 DLC1 Rho GTPase activating protein
DLK1 delta-like 1 homolog (Drosophila)
DPP4 dipeptidyl-peptidase 4
DRD1 dopamine receptor D1
DRD2 dopamine receptor D2
DYRK2 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
EDN1 endothelin 1
EDNRA endothelin receptor type A
EGFR epidermal growth factor receptor
EGLN3 egl-9 family hypoxia-inducible factor 3
EHD1 EH-domain containing 1
EIF3A eukaryotic translation initiation factor 3, subunit A
EIF4E eukaryotic translation initiation factor 4E
EP300 E1A binding protein p300
EPCAM epithelial cell adhesion molecule
EPHA1 EPH receptor A1
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
EPHX2 epoxide hydrolase 2, cytoplasmic
EPO erythropoietin
EPOR erythropoietin receptor
EPPIN epididymal peptidase inhibitor
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB3 erb-b2 receptor tyrosine kinase 3
ERCC1 excision repair cross-complementation group 1
ERCC2 excision repair cross-complementation group 2
ERG v-ets avian erythroblastosis virus E26 oncogene homolog
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
ESRP1 epithelial splicing regulatory protein 1
ETV1 ets variant 1
ETV6 ets variant 6
F13A1 coagulation factor XIII, A1 polypeptide
F13B coagulation factor XIII, B polypeptide
F8 coagulation factor VIII, procoagulant component
FABP2 fatty acid binding protein 2, intestinal
FASLG Fas ligand (TNF superfamily, member 6)
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23)
FERMT2 fermitin family member 2
FGFR2 fibroblast growth factor receptor 2
FGFR3 fibroblast growth factor receptor 3
FLT1 fms-related tyrosine kinase 1
FLT3 fms-related tyrosine kinase 3
FOLR1 folate receptor 1 (adult)
FOXA1 forkhead box A1
FOXO1 forkhead box O1
FOXO3 forkhead box O3
FOXP1 forkhead box P1
FOXP3 forkhead box P3
FTO fat mass and obesity associated
GCG glucagon
GHR growth hormone receptor
GJB2 gap junction protein, beta 2, 26kDa
GLI3 GLI family zinc finger 3
GNMT glycine N-methyltransferase
GREB1 growth regulation by estrogen in breast cancer 1
GSTM1 glutathione S-transferase mu 1
GSTP1 glutathione S-transferase pi 1
GSTT1 glutathione S-transferase theta 1
GYPC glycophorin C (Gerbich blood group)
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HLA-A major histocompatibility complex, class I, A
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HNF4A hepatocyte nuclear factor 4, alpha
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HP haptoglobin
HPRT1 hypoxanthine phosphoribosyltransferase 1
HPSE heparanase
HSPA4 heat shock 70kDa protein 4
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HSPG2 heparan sulfate proteoglycan 2
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IDO1 indoleamine 2,3-dioxygenase 1
IFNG interferon, gamma
IFNL3 interferon, lambda 3
IFNL4 interferon, lambda 4 (gene/pseudogene)
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF1R insulin-like growth factor 1 receptor
IGFBP3 insulin-like growth factor binding protein 3
IGHMBP2 immunoglobulin mu binding protein 2
IL10 interleukin 10
IL15 interleukin 15
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL2 interleukin 2
IL2RA interleukin 2 receptor, alpha
IL6 interleukin 6
IL7 interleukin 7
IL7R interleukin 7 receptor
ING5 inhibitor of growth family, member 5
INSR insulin receptor
IRF1 interferon regulatory factor 1
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
KCTD10 potassium channel tetramerization domain containing 10
KDR kinase insert domain receptor
KISS1 KiSS-1 metastasis-suppressor
KISS1R KISS1 receptor
KLF4 Kruppel-like factor 4 (gut)
KLK11 kallikrein-related peptidase 11
KLK13 kallikrein-related peptidase 13
KLK8 kallikrein-related peptidase 8
KMT2A lysine (K)-specific methyltransferase 2A
KMT2E lysine (K)-specific methyltransferase 2E
KRAS Kirsten rat sarcoma viral oncogene homolog
LCN2 lipocalin 2
LEP leptin
LGALS3 lectin, galactoside-binding, soluble, 3
LILRB1 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1
LPL lipoprotein lipase
MAML2 mastermind-like 2 (Drosophila)
MBL2 mannose-binding lectin (protein C) 2, soluble
MC4R melanocortin 4 receptor
MDK midkine (neurite growth-promoting factor 2)
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MEFV Mediterranean fever
MEIS1 Meis homeobox 1
MET MET proto-oncogene, receptor tyrosine kinase
MGMT O-6-methylguanine-DNA methyltransferase
MINA MYC induced nuclear antigen
MIR124-1 microRNA 124-1
MIR135B microRNA 135b
MIR17 microRNA 17
MIR20A microRNA 20a
MIR503 microRNA 503
MIR650 microRNA 650
MLH1 mutL homolog 1
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
MME membrane metallo-endopeptidase
MMP1 matrix metallopeptidase 1
MMP10 matrix metallopeptidase 10
MMP2 matrix metallopeptidase 2
MMP7 matrix metallopeptidase 7
MSMB microseminoprotein, beta-
MSTN myostatin
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase
MUC4 mucin 4, cell surface associated
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
MYD88 myeloid differentiation primary response 88
NANOG Nanog homeobox
NCAM1 neural cell adhesion molecule 1
NDRG1 N-myc downstream regulated 1
NEFH neurofilament, heavy polypeptide
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
NGFR nerve growth factor receptor
NKX2-1 NK2 homeobox 1
NOS2 nitric oxide synthase 2, inducible
NOTCH1 notch 1
NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin)
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NPPA natriuretic peptide A
NPPB natriuretic peptide B
NRCAM neuronal cell adhesion molecule
NSD1 nuclear receptor binding SET domain protein 1
NUP214 nucleoporin 214kDa
NUP98 nucleoporin 98kDa
OLFM1 olfactomedin 1
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4
PBX1 pre-B-cell leukemia homeobox 1
PBX3 pre-B-cell leukemia homeobox 3
PDCD5 programmed cell death 5
PDE4DIP phosphodiesterase 4D interacting protein
PDGFB platelet-derived growth factor beta polypeptide
PEBP1 phosphatidylethanolamine binding protein 1
PGR progesterone receptor
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PIP prolactin-induced protein
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid)
PLD2 phospholipase D2
PON1 paraoxonase 1
POU5F1 POU class 5 homeobox 1
PPARA peroxisome proliferator-activated receptor alpha
PPARD peroxisome proliferator-activated receptor delta
PPARG peroxisome proliferator-activated receptor gamma
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme
PRAME preferentially expressed antigen in melanoma
PRKCDBP protein kinase C, delta binding protein
PROM1 prominin 1
PTAFR platelet-activating factor receptor
PTEN phosphatase and tensin homolog
PTH1R parathyroid hormone 1 receptor
PTHLH parathyroid hormone-like hormone
PTK6 protein tyrosine kinase 6
PTPN12 protein tyrosine phosphatase, non-receptor type 12
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
RB1 retinoblastoma 1
RBM3 RNA binding motif (RNP1, RRM) protein 3
REG4 regenerating islet-derived family, member 4
REPS2 RALBP1 associated Eps domain containing 2
RET ret proto-oncogene
RHOA ras homolog family member A
RHOQ ras homolog family member Q
RUNX1 runt-related transcription factor 1
S100P S100 calcium binding protein P
SCARA3 scavenger receptor class A, member 3
SCGB2A1 secretoglobin, family 2A, member 1
SCN2A sodium channel, voltage gated, type II alpha subunit
SCN5A sodium channel, voltage gated, type V alpha subunit
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SF3B1 splicing factor 3b, subunit 1, 155kDa
SFN stratifin
SFRP1 secreted frizzled-related protein 1
SFRP2 secreted frizzled-related protein 2
SHBG sex hormone-binding globulin
SIRT3 sirtuin 3
SIX2 SIX homeobox 2
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1
SLC39A6 solute carrier family 39 (zinc transporter), member 6
SLC5A8 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNX10 sorting nexin 10
SOCS2 suppressor of cytokine signaling 2
SOCS3 suppressor of cytokine signaling 3
SOX2 SRY (sex determining region Y)-box 2
SOX4 SRY (sex determining region Y)-box 4
SOX9 SRY (sex determining region Y)-box 9
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPDEF SAM pointed domain containing ETS transcription factor
SPDYA speedy/RINGO cell cycle regulator family member A
SPINT1 serine peptidase inhibitor, Kunitz type 1
SREBF2 sterol regulatory element binding transcription factor 2
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT5A signal transducer and activator of transcription 5A
STAU1 staufen double-stranded RNA binding protein 1
STIL SCL/TAL1 interrupting locus
STK11 serine/threonine kinase 11
TCF3 transcription factor 3
TET2 tet methylcytosine dioxygenase 2
TFE3 transcription factor binding to IGHM enhancer 3
TGFB1 transforming growth factor, beta 1
THBS1 thrombospondin 1
THPO thrombopoietin
TIMP2 TIMP metallopeptidase inhibitor 2
TLE3 transducin-like enhancer of split 3
TLR3 toll-like receptor 3
TMEM25 transmembrane protein 25
TNF tumor necrosis factor
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TOP2A topoisomerase (DNA) II alpha 170kDa
TP53 tumor protein p53
TPO thyroid peroxidase
TYMP thymidine phosphorylase
UTS2 urotensin 2
VEGFA vascular endothelial growth factor A
VIM vimentin
VTCN1 V-set domain containing T cell activation inhibitor 1
WFDC2 WAP four-disulfide core domain 2
WIF1 WNT inhibitory factor 1
WIPF1 WAS/WASL interacting protein family, member 1
WT1 Wilms tumor 1
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
ZBTB17 zinc finger and BTB domain containing 17
ZEB2 zinc finger E-box binding homeobox 2
ZNHIT3 zinc finger, HIT-type containing 3