fragments Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

281 genes co-occuring with the biological term fragments in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
A2M alpha-2-macroglobulin
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ACAN aggrecan
ACBD3 acyl-CoA binding domain containing 3
ACPP acid phosphatase, prostate
ADAM19 ADAM metallopeptidase domain 19
AHNAK AHNAK nucleoprotein
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALB albumin
APC adenomatous polyposis coli
APH1A APH1A gamma secretase subunit
APLP1 amyloid beta (A4) precursor-like protein 1
APLP2 amyloid beta (A4) precursor-like protein 2
APOE apolipoprotein E
APOH apolipoprotein H (beta-2-glycoprotein I)
APP amyloid beta (A4) precursor protein
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2
ATXN3 ataxin 3
ATXN7 ataxin 7
BAGE B melanoma antigen
BCL2L1 BCL2-like 1
BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2
BRCA2 breast cancer 2, early onset
BRD4 bromodomain containing 4
C3 complement component 3
C5 complement component 5
C5AR2 complement component 5a receptor 2
CAMP cathelicidin antimicrobial peptide
CAPN3 calpain 3, (p94)
CASP14 caspase 14, apoptosis-related cysteine peptidase
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASP8 caspase 8, apoptosis-related cysteine peptidase
CAV1 caveolin 1, caveolae protein, 22kDa
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD44 CD44 molecule (Indian blood group)
CD47 CD47 molecule
CDCP1 CUB domain containing protein 1
CDK1 cyclin-dependent kinase 1
CDK5 cyclin-dependent kinase 5
CENPC centromere protein C
CFH complement factor H
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHGA chromogranin A
CHGB chromogranin B
CLDN3 claudin 3
COL1A1 collagen, type I, alpha 1
COL1A2 collagen, type I, alpha 2
COL2A1 collagen, type II, alpha 1
COMP cartilage oligomeric matrix protein
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CR2 complement component (3d/Epstein Barr virus) receptor 2
CRHR1 corticotropin releasing hormone receptor 1
CRP C-reactive protein, pentraxin-related
CRYBB2 crystallin, beta B2
CTCF CCCTC-binding factor (zinc finger protein)
CTSB cathepsin B
CTSD cathepsin D
CTTN cortactin
CXCL8 chemokine (C-X-C motif) ligand 8
DICER1 dicer 1, ribonuclease type III
DLL1 delta-like 1 (Drosophila)
DMD dystrophin
DSG2 desmoglein 2
DUSP6 dual specificity phosphatase 6
DUX4L1 double homeobox 4 like 1
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1
ELN elastin
EMILIN2 elastin microfibril interfacer 2
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB4 erb-b2 receptor tyrosine kinase 4
ETF1 eukaryotic translation termination factor 1
ETV5 ets variant 5
F2 coagulation factor II (thrombin)
FASLG Fas ligand (TNF superfamily, member 6)
FBLN1 fibulin 1
FBLN5 fibulin 5
FBN1 fibrillin 1
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23)
FCGR1A Fc fragment of IgG, high affinity Ia, receptor (CD64)
FEN1 flap structure-specific endonuclease 1
FGA fibrinogen alpha chain
FGF23 fibroblast growth factor 23
FGG fibrinogen gamma chain
FIBCD1 fibrinogen C domain containing 1
FKBP4 FK506 binding protein 4, 59kDa
FLNA filamin A, alpha
FMOD fibromodulin
FN1 fibronectin 1
FYN FYN proto-oncogene, Src family tyrosine kinase
GAK cyclin G associated kinase
GAST gastrin
GH1 growth hormone 1
GHRL ghrelin/obestatin prepropeptide
GIF gastric intrinsic factor (vitamin B synthesis)
GOLGA3 golgin A3
GORASP1 golgi reassembly stacking protein 1, 65kDa
GPNMB glycoprotein (transmembrane) nmb
GPT glutamic-pyruvate transaminase (alanine aminotransferase)
GRN granulin
GRP gastrin-releasing peptide
GSK3B glycogen synthase kinase 3 beta
GSN gelsolin
GUCY1B3 guanylate cyclase 1, soluble, beta 3
GULP1 GULP, engulfment adaptor PTB domain containing 1
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HMGA2 high mobility group AT-hook 2
HMMR hyaluronan-mediated motility receptor (RHAMM)
HRAS Harvey rat sarcoma viral oncogene homolog
HRNR hornerin
HSPA1A heat shock 70kDa protein 1A
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HSPG2 heparan sulfate proteoglycan 2
HTRA2 HtrA serine peptidase 2
HTT huntingtin
IAPP islet amyloid polypeptide
ICAM1 intercellular adhesion molecule 1
IGF1R insulin-like growth factor 1 receptor
IGF2 insulin-like growth factor 2
IGFBP1 insulin-like growth factor binding protein 1
IGFBP2 insulin-like growth factor binding protein 2, 36kDa
IGFBP3 insulin-like growth factor binding protein 3
IL1B interleukin 1, beta
IL4 interleukin 4
IL6 interleukin 6
INS insulin
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
ITM2B integral membrane protein 2B
JAG1 jagged 1
KIF21A kinesin family member 21A
KIN Kin17 DNA and RNA binding protein
KLF4 Kruppel-like factor 4 (gut)
KLK4 kallikrein-related peptidase 4
KMT2A lysine (K)-specific methyltransferase 2A
KRT18 keratin 18, type I
LAMA4 laminin, alpha 4
LAMA5 laminin, alpha 5
LAMC2 laminin, gamma 2
LDB3 LIM domain binding 3
LEP leptin
LPA lipoprotein, Lp(a)
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
LRRTM3 leucine rich repeat transmembrane neuronal 3
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast)
MALT1 MALT1 paracaspase
MAPK1 mitogen-activated protein kinase 1
MAPK14 mitogen-activated protein kinase 14
MAPK3 mitogen-activated protein kinase 3
MAPT microtubule-associated protein tau
MCM2 minichromosome maintenance complex component 2
MCM4 minichromosome maintenance complex component 4
MEP1B meprin A, beta
MLH1 mutL homolog 1
MME membrane metallo-endopeptidase
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP19 matrix metallopeptidase 19
MMP2 matrix metallopeptidase 2
MMP3 matrix metallopeptidase 3
MMP9 matrix metallopeptidase 9
MRC2 mannose receptor, C type 2
MSH2 mutS homolog 2
MST1R macrophage stimulating 1 receptor
MYD88 myeloid differentiation primary response 88
MYH10 myosin, heavy chain 10, non-muscle
MYH9 myosin, heavy chain 9, non-muscle
MYOM1 myomesin 1
NCAM1 neural cell adhesion molecule 1
NCSTN nicastrin
NDEL1 nudE neurodevelopment protein 1-like 1
NISCH nischarin
NOTCH1 notch 1
NOTCH3 notch 3
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NPPB natriuretic peptide B
NR0B2 nuclear receptor subfamily 0, group B, member 2
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NR5A2 nuclear receptor subfamily 5, group A, member 2
NUCLEOLIN nucleolin multifunctional protein
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II
PCNA proliferating cell nuclear antigen
PDIA3 protein disulfide isomerase family A, member 3
PDPN podoplanin
PDYN prodynorphin
PECAM1 platelet/endothelial cell adhesion molecule 1
PF4 platelet factor 4
PIP prolactin-induced protein
PKD2 polycystic kidney disease 2 (autosomal dominant)
PLAUR plasminogen activator, urokinase receptor
PLEKHO1 pleckstrin homology domain containing, family O member 1
PLG plasminogen
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
PMEL premelanosome protein
POLG polymerase (DNA directed), gamma
POU2F1 POU class 2 homeobox 1
PPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)
PPBPP1 pro-platelet basic protein pseudogene 1
PRKCA protein kinase C, alpha
PRL prolactin
PRNP prion protein
PRUNE2 prune homolog 2 (Drosophila)
PSAP prosaposin
PSEN1 presenilin 1
PSEN2 presenilin 2
PSENEN presenilin enhancer gamma secretase subunit
PTH parathyroid hormone
PTK2 protein tyrosine kinase 2
PTPRM protein tyrosine phosphatase, receptor type, M
RAB5A RAB5A, member RAS oncogene family
RAD51B RAD51 paralog B
RB1 retinoblastoma 1
RFC1 replication factor C (activator 1) 1, 145kDa
RHD Rh blood group, D antigen
RNU2-1 RNA, U2 small nuclear 1
RPS3 ribosomal protein S3
RPS9 ribosomal protein S9
RUNX1 runt-related transcription factor 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
SCNN1G sodium channel, non voltage gated 1 gamma subunit
SEMG1 semenogelin I
SEMG2 semenogelin II
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1
SNAP25 synaptosomal-associated protein, 25kDa
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOD1 superoxide dismutase 1, soluble
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
SP1 Sp1 transcription factor
SPI1 Spi-1 proto-oncogene
SPP1 secreted phosphoprotein 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SRSF1 serine/arginine-rich splicing factor 1
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
SUMO1 small ubiquitin-like modifier 1
SUMO2 small ubiquitin-like modifier 2
TAC4 tachykinin 4 (hemokinin)
TARDBP TAR DNA binding protein
TG thyroglobulin
TGFB1 transforming growth factor, beta 1
TGFBI transforming growth factor, beta-induced, 68kDa
TGFBR3 transforming growth factor, beta receptor III
TGM1 transglutaminase 1
TGM2 transglutaminase 2
TGM3 transglutaminase 3
TLR2 toll-like receptor 2
TLR3 toll-like receptor 3
TLR4 toll-like receptor 4
TLR7 toll-like receptor 7
TMSB4X thymosin beta 4, X-linked
TNC tenascin C
TNF tumor necrosis factor
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF4 tumor necrosis factor receptor superfamily, member 4
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNNT2 troponin T type 2 (cardiac)
TP53 tumor protein p53
TP63 tumor protein p63
TP73 tumor protein p73
TRPM7 transient receptor potential cation channel, subfamily M, member 7
TTR transthyretin
TXNRD1 thioredoxin reductase 1
UBE3C ubiquitin protein ligase E3C
UBQLN1 ubiquilin 1
VCAM1 vascular cell adhesion molecule 1
VCAN versican
VCP valosin containing protein
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
VSIG4 V-set and immunoglobulin domain containing 4
VTN vitronectin
VWF von Willebrand factor
WARS tryptophanyl-tRNA synthetase
YARS tyrosyl-tRNA synthetase
ZBTB7B zinc finger and BTB domain containing 7B