germinoma Gene Set

Dataset DISEASES Text-mining Gene-Disease Association Evidence Scores
Category disease or phenotype associations
Type disease
Description A germ cell cancer that lacks histologic differentiation. It usually refers to a tumor in the brain. (Human Disease Ontology, DOID_3304)
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Genes

233 genes co-occuring with the disease germinoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
AFP alpha-fetoprotein 2.21431
ALPPL2 alkaline phosphatase, placental-like 2 1.90381
ALPP alkaline phosphatase, placental 1.86735
ALPL alkaline phosphatase, liver/bone/kidney 1.83047
SALL4 spalt-like transcription factor 4 1.50228
POU5F1 POU class 5 homeobox 1 1.47506
SOX17 SRY (sex determining region Y)-box 17 1.3542
AVP arginine vasopressin 1.32017
TSPY1 testis specific protein, Y-linked 1 1.30095
SAGE1 sarcoma antigen 1 1.25254
TSPY10 testis specific protein, Y-linked 10 1.24863
TSPY3 testis specific protein, Y-linked 3 1.24863
NANOG Nanog homeobox 1.23603
FAM71F2 family with sequence similarity 71, member F2 1.23516
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 1.1755
SOX2 SRY (sex determining region Y)-box 2 1.17292
DMRT1 doublesex and mab-3 related transcription factor 1 1.0753
ALPI alkaline phosphatase, intestinal 1.05345
SRY sex determining region Y 1.01554
MAGEA4 melanoma antigen family A4 1.00541
SLC43A1 solute carrier family 43 (amino acid system L transporter), member 1 0.967083
ENO2 enolase 2 (gamma, neuronal) 0.949519
TESK1 testis-specific kinase 1 0.902799
NANOS3 nanos homolog 3 (Drosophila) 0.897051
NRM nurim (nuclear envelope membrane protein) 0.870415
INHA inhibin, alpha 0.867549
GPC3 glypican 3 0.866731
SPATA12 spermatogenesis associated 12 0.847898
PNMA2 paraneoplastic Ma antigen 2 0.828639
TP53 tumor protein p53 0.823308
GPER1 G protein-coupled estrogen receptor 1 0.816334
SPRY4 sprouty homolog 4 (Drosophila) 0.811411
ENTPD6 ectonucleoside triphosphate diphosphohydrolase 6 (putative) 0.806898
TSKS testis-specific serine kinase substrate 0.800744
PDPN podoplanin 0.800333
CSH1 chorionic somatomammotropin hormone 1 (placental lactogen) 0.796232
AP2A1 adaptor-related protein complex 2, alpha 1 subunit 0.792131
ZNF354A zinc finger protein 354A 0.786394
DDIT4L DNA-damage-inducible transcript 4-like 0.785574
CSH2 chorionic somatomammotropin hormone 2 0.774114
DNMT3L DNA (cytosine-5-)-methyltransferase 3-like 0.772887
GRB7 growth factor receptor-bound protein 7 0.763086
POU5F1B POU class 5 homeobox 1B 0.759824
MEG3 maternally expressed 3 (non-protein coding) 0.744766
PTPN23 protein tyrosine phosphatase, non-receptor type 23 0.730166
TEKT1 tektin 1 0.728547
UTF1 undifferentiated embryonic cell transcription factor 1 0.722886
GDF3 growth differentiation factor 3 0.686691
TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) 0.670333
CT45A1 cancer/testis antigen family 45, member A1 0.657234
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 0.644981
CCND2 cyclin D2 0.634349
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.630027
H3F3C H3 histone, family 3C 0.629242
RNF20 ring finger protein 20, E3 ubiquitin protein ligase 0.624535
RNF112 ring finger protein 112 0.616312
CGB chorionic gonadotropin, beta polypeptide 0.606543
CGB8 chorionic gonadotropin, beta polypeptide 8 0.605762
EIF3C eukaryotic translation initiation factor 3, subunit C 0.605762
COX7A1 cytochrome c oxidase subunit VIIa polypeptide 1 (muscle) 0.604591
ZNF135 zinc finger protein 135 0.60186
ZNF91 zinc finger protein 91 0.59913
PTPRC protein tyrosine phosphatase, receptor type, C 0.595623
RAB39B RAB39B, member RAS oncogene family 0.591727
MAGEC1 melanoma antigen family C1 0.582384
NLRP7 NLR family, pyrin domain containing 7 0.58005
DNAAF1 dynein, axonemal, assembly factor 1 0.575772
NANOS2 nanos homolog 2 (Drosophila) 0.572662
WT1 Wilms tumor 1 0.56722
CALB2 calbindin 2 0.565666
GAGE12G G antigen 12G 0.561392
BAK1 BCL2-antagonist/killer 1 0.554403
PRMT5 protein arginine methyltransferase 5 0.547807
GAGE12I G antigen 12I 0.542767
ATF7IP activating transcription factor 7 interacting protein 0.536957
LHCGR luteinizing hormone/choriogonadotropin receptor 0.532314
TDRD1 tudor domain containing 1 0.528063
LDHA lactate dehydrogenase A 0.527676
FGF4 fibroblast growth factor 4 0.523045
TCL1A T-cell leukemia/lymphoma 1A 0.521117
CTAG1A cancer/testis antigen 1A 0.520346
ACVR1B activin A receptor, type IB 0.517649
PIWIL4 piwi-like RNA-mediated gene silencing 4 0.516494
PRL prolactin 0.514571
SNED1 sushi, nidogen and EGF-like domains 1 0.509576
CTAG1B cancer/testis antigen 1B 0.506507
PODXL podocalyxin-like 0.499231
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.493122
KRT7 keratin 7, type II 0.488169
KITLG KIT ligand 0.485505
HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 0.482464
MMP16 matrix metallopeptidase 16 (membrane-inserted) 0.480945
AR androgen receptor 0.476014
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta 0.476014
ABCB9 ATP-binding cassette, sub-family B (MDR/TAP), member 9 0.475634
PATZ1 POZ (BTB) and AT hook containing zinc finger 1 0.471089
HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4 0.468819
ESR2 estrogen receptor 2 (ER beta) 0.467306
MCFD2 multiple coagulation factor deficiency 2 0.461261
MAGEA3 melanoma antigen family A3 0.457109
RNF139 ring finger protein 139 0.452585
WDR77 WD repeat domain 77 0.443547
GAGE12F G antigen 12F 0.437154
SYP synaptophysin 0.431519
TEAD4 TEA domain family member 4 0.430393
PAX8 paired box 8 0.42664
SLC5A7 solute carrier family 5 (sodium/choline cotransporter), member 7 0.424765
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2) 0.424389
NR5A1 nuclear receptor subfamily 5, group A, member 1 0.42364
PCNA proliferating cell nuclear antigen 0.419517
CDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) 0.413527
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.412779
PFKP phosphofructokinase, platelet 0.412405
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 0.411283
SYNPO2 synaptopodin 2 0.408666
PRDM14 PR domain containing 14 0.407172
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.406798
DRD1 dopamine receptor D1 0.403064
HRAS Harvey rat sarcoma viral oncogene homolog 0.402692
TTC12 tetratricopeptide repeat domain 12 0.397098
NUTM1 NUT midline carcinoma, family member 1 0.393746
LUZP4 leucine zipper protein 4 0.392257
NASP nuclear autoantigenic sperm protein (histone-binding) 0.391141
FTH1 ferritin, heavy polypeptide 1 0.391141
FTL ferritin, light polypeptide 0.391141
RNF4 ring finger protein 4 0.384079
CLEC1B C-type lectin domain family 1, member B 0.378885
PTPRS protein tyrosine phosphatase, receptor type, S 0.37555
NXF2B nuclear RNA export factor 2B 0.37555
NXF2 nuclear RNA export factor 2 0.37555
SYCP1 synaptonemal complex protein 1 0.369997
CHGA chromogranin A 0.362609
CD68 CD68 molecule 0.356341
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.353027
HSD17B1P1 hydroxysteroid (17-beta) dehydrogenase 1 pseudogene 1 0.352659
CCNA1 cyclin A1 0.346777
GDNF glial cell derived neurotrophic factor 0.343473
STRA8 stimulated by retinoic acid 8 0.343473
STK24 serine/threonine kinase 24 0.343473
ESR1 estrogen receptor 1 0.336876
PIWIL2 piwi-like RNA-mediated gene silencing 2 0.336144
FBXO44 F-box protein 44 0.335046
NME1 NME/NM23 nucleoside diphosphate kinase 1 0.325916
IGFALS insulin-like growth factor binding protein, acid labile subunit 0.323365
CCDC6 coiled-coil domain containing 6 0.323365
PTHLH parathyroid hormone-like hormone 0.322637
PRSS50 protease, serine, 50 0.318635
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) 0.315366
HAUS3 HAUS augmin-like complex, subunit 3 0.311739
INSL3 insulin-like 3 (Leydig cell) 0.305226
HSD17B1 hydroxysteroid (17-beta) dehydrogenase 1 0.290821
IGF2 insulin-like growth factor 2 0.290821
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 0.290462
LRRC4C leucine rich repeat containing 4C 0.289027
YBX2 Y box binding protein 2 0.285444
HSPH1 heat shock 105kDa/110kDa protein 1 0.285086
ART3 ADP-ribosyltransferase 3 0.280796
CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1 0.279011
KRAS Kirsten rat sarcoma viral oncogene homolog 0.278654
YBX3 Y box binding protein 3 0.266913
KLF4 Kruppel-like factor 4 (gut) 0.26266
POMC proopiomelanocortin 0.261952
LDHC lactate dehydrogenase C 0.260184
UVRAG UV radiation resistance associated 0.258064
CLDN6 claudin 6 0.254536
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.253479
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.249257
SOX9 SRY (sex determining region Y)-box 9 0.241196
RALB v-ral simian leukemia viral oncogene homolog B 0.240497
PROK1 prokineticin 1 0.235616
FGFR3 fibroblast growth factor receptor 3 0.233878
GAGE1 G antigen 1 0.233183
ESRRB estrogen-related receptor beta 0.231102
IKBKAP inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein 0.229716
KRT5 keratin 5, type II 0.229024
GIPC1 GIPC PDZ domain containing family, member 1 0.228333
BSG basigin (Ok blood group) 0.226607
RAD17 RAD17 homolog (S. pombe) 0.224196
JUP junction plakoglobin 0.222136
HMGA1 high mobility group AT-hook 1 0.221793
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.220766
HSF4 heat shock transcription factor 4 0.213621
LIF leukemia inhibitory factor 0.212945
RAB25 RAB25, member RAS oncogene family 0.210925
CLEC11A C-type lectin domain family 11, member A 0.210253
FRMD6 FERM domain containing 6 0.208914
AHRR aryl-hydrocarbon receptor repressor 0.208579
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 0.207578
CD4 CD4 molecule 0.205916
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.205916
KRT18 keratin 18, type I 0.204593
GFRA1 GDNF family receptor alpha 1 0.204263
LACTB lactamase, beta 0.200656
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1) 0.199681
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.199356
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.198064
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.197099
PDE11A phosphodiesterase 11A 0.194548
TSN translin 0.193915
LGALS1 lectin, galactoside-binding, soluble, 1 0.191719
DAZL deleted in azoospermia-like 0.191408
CCNA2 cyclin A2 0.190476
BRD2 bromodomain containing 2 0.189244
TMEM245 transmembrane protein 245 0.188632
HAVCR1 hepatitis A virus cellular receptor 1 0.188326
RRAS related RAS viral (r-ras) oncogene homolog 0.185612
EOMES eomesodermin 0.183248
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) 0.182375
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 0.180652
TET1 tet methylcytosine dioxygenase 1 0.180084
LEMD3 LEM domain containing 3 0.179239
CA9 carbonic anhydrase IX 0.178126
EEF1A2 eukaryotic translation elongation factor 1 alpha 2 0.176485
TFDP3 transcription factor Dp family, member 3 0.173314
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 0.173057
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.170054
FOXL2 forkhead box L2 0.168854
ACPP acid phosphatase, prostate 0.168381
POU2AF1 POU class 2 associating factor 1 0.167915
OXA1L oxidase (cytochrome c) assembly 1-like 0.167682
CD34 CD34 molecule 0.166768
TWIST2 twist family bHLH transcription factor 2 0.166544
STK26 serine/threonine protein kinase 26 0.166095
BANK1 B-cell scaffold protein with ankyrin repeats 1 0.165435
TPD52 tumor protein D52 0.165217
DSP desmoplakin 0.165217
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 0.165001
OCM2 oncomodulin 2 0.163729
AURKAIP1 aurora kinase A interacting protein 1 0.163317
KMO kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 0.163111
MXI1 MAX interactor 1, dimerization protein 0.160387
ZNF85 zinc finger protein 85 0.159302
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.158605