heparan sulfate proteoglycan biosynthetic process Gene Set

Dataset GO Biological Process Annotations 2023
Category structural or functional annotations
Type biological process
Description The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating alpha-(1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues. (Gene Ontology, GO_0015012)
External Link http://amigo.geneontology.org/amigo/term/GO_0015012
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Genes

24 genes participating in the heparan sulfate proteoglycan biosynthetic process biological process from the curated GO Biological Process Annotations 2023 dataset.

Symbol Name
B3GAT3 beta-1,3-glucuronyltransferase 3
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1
EXT1 exostosin glycosyltransferase 1
EXT2 exostosin glycosyltransferase 2
EXTL1 exostosin-like glycosyltransferase 1
EXTL3 exostosin-like glycosyltransferase 3
GLCE glucuronic acid epimerase
HS2ST1 heparan sulfate 2-O-sulfotransferase 1
HS3ST1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1
HS3ST2 heparan sulfate (glucosamine) 3-O-sulfotransferase 2
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
HS3ST3B1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
HS3ST6 heparan sulfate (glucosamine) 3-O-sulfotransferase 6
HS6ST1 heparan sulfate 6-O-sulfotransferase 1
HS6ST2 heparan sulfate 6-O-sulfotransferase 2
HS6ST3 heparan sulfate 6-O-sulfotransferase 3
NDST1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
NDST2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
NDST3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
SLC35D2 solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2
UGDH UDP-glucose 6-dehydrogenase
XYLT1 xylosyltransferase I
XYLT2 xylosyltransferase II