holoprosencephaly Gene Set

Dataset HPO Gene-Disease Associations
Category disease or phenotype associations
Type phenotype
Description A congenital nervous system abnormality characterized by failed or incomplete separation of the forebrain early in gestation; it is accompanied by a spectrum of characteristic craniofacial anomalies. (Human Disease Ontology, DOID_4621)
External Link http://compbio.charite.de/hpoweb/showterm?id=HP:0001360
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Genes

65 genes associated with the holoprosencephaly phenotype by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.

Symbol Name
ADAR adenosine deaminase, RNA-specific
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome
B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2
B9D1 B9 protein domain 1
B9D2 B9 protein domain 2
BUB1 BUB1 mitotic checkpoint serine/threonine kinase
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B
BUB3 BUB3 mitotic checkpoint protein
CC2D2A coiled-coil and C2 domain containing 2A
CDON cell adhesion associated, oncogene regulated
CEP290 centrosomal protein 290kDa
CEP57 centrosomal protein 57kDa
CHD7 chromodomain helicase DNA binding protein 7
COMT catechol-O-methyltransferase
DHCR7 7-dehydrocholesterol reductase
FANCB Fanconi anemia, complementation group B
FGFR1 fibroblast growth factor receptor 1
FGFR3 fibroblast growth factor receptor 3
FIG4 FIG4 phosphoinositide 5-phosphatase
FKRP fukutin related protein
FKTN fukutin
FNBP4 formin binding protein 4
FUZ fuzzy planar cell polarity protein
GLI2 GLI family zinc finger 2
GLI3 GLI family zinc finger 3
GMPPB GDP-mannose pyrophosphorylase B
GP1BB glycoprotein Ib (platelet), beta polypeptide
HIRA histone cell cycle regulator
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase
HYLS1 hydrolethalus syndrome 1
ICK intestinal cell (MAK-like) kinase
IFIH1 interferon induced with helicase C domain 1
KIF7 kinesin family member 7
L1CAM L1 cell adhesion molecule
LARGE like-glycosyltransferase
MKS1 Meckel syndrome, type 1
OTX2 orthodenticle homeobox 2
POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
POMT1 protein-O-mannosyltransferase 1
POMT2 protein-O-mannosyltransferase 2
PRRX1 paired related homeobox 1
PTCH1 patched 1
RB1 retinoblastoma 1
RNASEH2A ribonuclease H2, subunit A
RNASEH2B ribonuclease H2, subunit B
RNASEH2C ribonuclease H2, subunit C
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1
RPGRIP1L RPGRIP1-like
SAMHD1 SAM domain and HD domain 1
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
SHH sonic hedgehog
SIX3 SIX homeobox 3
SMOC1 SPARC related modular calcium binding 1
SOX2 SRY (sex determining region Y)-box 2
TBX1 T-box 1
TCTN2 tectonic family member 2
TGIF1 TGFB-induced factor homeobox 1
TMEM216 transmembrane protein 216
TMEM231 transmembrane protein 231
TMEM67 transmembrane protein 67
TREX1 three prime repair exonuclease 1
UFD1L ubiquitin fusion degradation 1 like (yeast)
VANGL1 VANGL planar cell polarity protein 1
WDPCP WD repeat containing planar cell polarity effector
ZIC2 Zic family member 2