hsa-miR-549 Gene Set

Dataset TargetScan Predicted Conserved microRNA Targets
Category genomics
Type microRNA
Description microRNA 549a|microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] (NCBI Entrez Gene Database, 693132)
External Link http://www.targetscan.org/cgi-bin/targetscan/vert_70/targetscan.cgi?mirg=hsa-miR-549
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Genes

199 target genes of the hsa-miR-549 microRNA predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset.

Symbol Name Standardized Value
EDEM1 ER degradation enhancer, mannosidase alpha-like 1 1.45615
ZNF197 zinc finger protein 197 1.45615
HSPA4 heat shock 70kDa protein 4 1.45615
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 1.45615
SRI sorcin 1.45615
CASP14 caspase 14, apoptosis-related cysteine peptidase 1.45615
PTRHD1 peptidyl-tRNA hydrolase domain containing 1 1.45615
SI sucrase-isomaltase (alpha-glucosidase) 1.45615
NPY1R neuropeptide Y receptor Y1 1.26663
SCAF8 SR-related CTD-associated factor 8 1.26663
TDRD6 tudor domain containing 6 1.26663
CDK14 cyclin-dependent kinase 14 1.26663
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 1.26663
MBLAC2 metallo-beta-lactamase domain containing 2 1.26663
ZNF660 zinc finger protein 660 1.26663
ATP11A ATPase, class VI, type 11A 1.26663
TRIP11 thyroid hormone receptor interactor 11 1.26663
EIF5A2 eukaryotic translation initiation factor 5A2 1.11641
MARCH6 membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 1.11641
KIAA0430 KIAA0430 1.11641
SP4 Sp4 transcription factor 1.11641
AAED1 AhpC/TSA antioxidant enzyme domain containing 1 1.11641
FASTKD2 FAST kinase domains 2 1.11641
AUNIP aurora kinase A and ninein interacting protein 1.11641
TAOK1 TAO kinase 1 1.11641
WLS wntless Wnt ligand secretion mediator 1.11641
SEC23IP SEC23 interacting protein 1.11641
IMPAD1 inositol monophosphatase domain containing 1 1.11641
ABAT 4-aminobutyrate aminotransferase 1.11641
PAX3 paired box 3 0.997906
RBM15B RNA binding motif protein 15B 0.997906
ARL8B ADP-ribosylation factor-like 8B 0.997906
RRAS2 related RAS viral (r-ras) oncogene homolog 2 0.90397
TTC33 tetratricopeptide repeat domain 33 0.90397
KLF9 Kruppel-like factor 9 0.90397
XPR1 xenotropic and polytropic retrovirus receptor 1 0.90397
EID1 EP300 interacting inhibitor of differentiation 1 0.90397
CLNS1A chloride channel, nucleotide-sensitive, 1A 0.90397
MDH1B malate dehydrogenase 1B, NAD (soluble) 0.828473
ERO1LB ERO1-like beta (S. cerevisiae) 0.828473
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.828473
LANCL3 LanC lantibiotic synthetase component C-like 3 (bacterial) 0.766596
PDIK1L PDLIM1 interacting kinase 1 like 0.766596
FUCA1 fucosidase, alpha-L- 1, tissue 0.766596
DMTF1 cyclin D binding myb-like transcription factor 1 0.766596
SPTBN1 spectrin, beta, non-erythrocytic 1 0.766596
RMND5A required for meiotic nuclear division 5 homolog A (S. cerevisiae) 0.766596
PDCD6IP programmed cell death 6 interacting protein 0.766596
CUL3 cullin 3 0.766596
TNF tumor necrosis factor 0.766596
PAX6 paired box 6 0.714812
LIMCH1 LIM and calponin homology domains 1 0.714812
TYW1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) 0.714812
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa 0.714812
OSBPL2 oxysterol binding protein-like 2 0.714812
RAB3A RAB3A, member RAS oncogene family 0.714812
TYW1B tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae) 0.714812
UBN2 ubinuclein 2 0.670641
UBE2N ubiquitin-conjugating enzyme E2N 0.670641
YKT6 YKT6 v-SNARE homolog (S. cerevisiae) 0.670641
METTL14 methyltransferase like 14 0.632343
MYO5A myosin VA (heavy chain 12, myoxin) 0.632343
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.632343
RBM12 RNA binding motif protein 12 0.632343
ZNF217 zinc finger protein 217 0.632343
TLR4 toll-like receptor 4 0.632343
PLLP plasmolipin 0.598666
MET MET proto-oncogene, receptor tyrosine kinase 0.598666
SOX21 SRY (sex determining region Y)-box 21 0.598666
LPIN2 lipin 2 0.598666
PCSK2 proprotein convertase subtilisin/kexin type 2 0.598666
MARK1 MAP/microtubule affinity-regulating kinase 1 0.568687
USP24 ubiquitin specific peptidase 24 0.568687
MMS22L MMS22-like, DNA repair protein 0.568687
PRRG3 proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane) 0.568687
BNC2 basonuclin 2 0.568687
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.541706
DDX42 DEAD (Asp-Glu-Ala-Asp) box helicase 42 0.517189
ZFP91 ZFP91 zinc finger protein 0.517189
SH2D4B SH2 domain containing 4B 0.517189
UBAP2 ubiquitin associated protein 2 0.517189
USP10 ubiquitin specific peptidase 10 0.517189
HP1BP3 heterochromatin protein 1, binding protein 3 0.49473
FLT1 fms-related tyrosine kinase 1 0.49473
SRPK2 SRSF protein kinase 2 0.49473
TMEM242 transmembrane protein 242 0.474009
GRM5 glutamate receptor, metabotropic 5 0.474009
PPIE peptidylprolyl isomerase E (cyclophilin E) 0.454769
HMGB1 high mobility group box 1 0.454769
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.436802
TENM1 teneurin transmembrane protein 1 0.419947
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.419947
TULP4 tubby like protein 4 0.419947
H3F3A H3 histone, family 3A 0.419947
ASXL2 additional sex combs like transcriptional regulator 2 0.419947
NANOS1 nanos homolog 1 (Drosophila) 0.404082
MPPED2 metallophosphoesterase domain containing 2 0.404082
IGFBP5 insulin-like growth factor binding protein 5 0.404082
THRA thyroid hormone receptor, alpha 0.404082
PITPNM3 PITPNM family member 3 0.389112
ZFHX3 zinc finger homeobox 3 0.389112
ZSWIM6 zinc finger, SWIM-type containing 6 0.389112
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.37496
IER5L immediate early response 5-like 0.37496
SHC3 SHC (Src homology 2 domain containing) transforming protein 3 0.37496
PHF23 PHD finger protein 23 0.361556
ZC3H6 zinc finger CCCH-type containing 6 0.361556
GRSF1 G-rich RNA sequence binding factor 1 0.336728
EFR3B EFR3 homolog B (S. cerevisiae) 0.336728
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.336728
FRMD4A FERM domain containing 4A 0.32519
TOP1 topoisomerase (DNA) I 0.32519
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.32519
UBE2F ubiquitin-conjugating enzyme E2F (putative) 0.303626
CDK17 cyclin-dependent kinase 17 0.303626
ZFHX4 zinc finger homeobox 4 0.303626
RBMS1 RNA binding motif, single stranded interacting protein 1 0.283838
CREG2 cellular repressor of E1A-stimulated genes 2 0.283838
RANBP2 RAN binding protein 2 0.274552
RAG1 recombination activating gene 1 0.274552
ZKSCAN3 zinc finger with KRAB and SCAN domains 3 0.274552
FAM155B family with sequence similarity 155, member B 0.265648
CASC3 cancer susceptibility candidate 3 0.265648
STIM2 stromal interaction molecule 2 0.257113
PEG10 paternally expressed 10 0.257113
MTURN maturin, neural progenitor differentiation regulator homolog (Xenopus) 0.248923
ANKRD40 ankyrin repeat domain 40 0.241055
C17ORF96 chromosome 17 open reading frame 96 0.241055
XYLT1 xylosyltransferase I 0.23348
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.23348
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta 0.226173
TUBD1 tubulin, delta 1 0.226173
FAM76A family with sequence similarity 76, member A 0.219115
PCDH19 protocadherin 19 0.219115
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.219115
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.219115
LENG8 leukocyte receptor cluster (LRC) member 8 0.212286
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.212286
HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor 0.205675
PHIP pleckstrin homology domain interacting protein 0.205675
NYAP2 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 0.199275
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 0.199275
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) 0.193083
MFAP5 microfibrillar associated protein 5 0.193083
MAP7 microtubule-associated protein 7 0.187098
WDR72 WD repeat domain 72 0.187098
PAPOLG poly(A) polymerase gamma 0.175726
SACK1A scaffolding CK1 anchoring protein A 0.17031
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.154935
HMP19 HMP19 protein 0.15008
ZMYM3 zinc finger, MYM-type 3 0.15008
LARP4 La ribonucleoprotein domain family, member 4 0.145356
SKI SKI proto-oncogene 0.140752
ENC1 ectodermal-neural cortex 1 (with BTB domain) 0.140752
MME membrane metallo-endopeptidase 0.140752
ZBED4 zinc finger, BED-type containing 4 0.131849
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.127531
RABL3 RAB, member of RAS oncogene family-like 3 0.127531
PRDM4 PR domain containing 4 0.123298
CNGB3 cyclic nucleotide gated channel beta 3 0.119151
KCNA3 potassium channel, voltage gated shaker related subfamily A, member 3 0.115091
BDNF brain-derived neurotrophic factor 0.115091
ZMAT3 zinc finger, matrin-type 3 0.115091
KANSL1L KAT8 regulatory NSL complex subunit 1-like 0.107229
PSME3 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 0.107229
MRPL17 mitochondrial ribosomal protein L17 0.099701
RBM14 RNA binding motif protein 14 0.099701
SZRD1 SUZ RNA binding domain containing 1 0.09606
TARDBP TAR DNA binding protein 0.092495
C14ORF119 chromosome 14 open reading frame 119 0.088999
UVRAG UV radiation resistance associated 0.085563
DCUN1D3 DCN1, defective in cullin neddylation 1, domain containing 3 0.082179
MOB3B MOB kinase activator 3B 0.082179
TAL1 T-cell acute lymphocytic leukemia 1 0.082179
CUX1 cut-like homeobox 1 0.072324
UBTF upstream binding transcription factor, RNA polymerase I 0.065994
ZBTB47 zinc finger and BTB domain containing 47 0.062888
CAV2 caveolin 2 0.053794
SLC7A6 solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 0.047969
ACVR1C activin A receptor, type IC 0.042355
CBX7 chromobox homolog 7 0.042355
SP8 Sp8 transcription factor 0.039622
NFYA nuclear transcription factor Y, alpha 0.039622
QKI QKI, KH domain containing, RNA binding 0.03694
LDLRAD4 low density lipoprotein receptor class A domain containing 4 0.034317
DCLK1 doublecortin-like kinase 1 0.034317
NEGR1 neuronal growth regulator 1 0.031759
VANGL2 VANGL planar cell polarity protein 2 0.029271
HLF hepatic leukemia factor 0.017945
WASF2 WAS protein family, member 2 0.017945
LHFPL4 lipoma HMGIC fusion partner-like 4 0.015875
NXPH3 neurexophilin 3 0.015875
KIAA0040 KIAA0040 0.015875
MCTS1 malignant T cell amplified sequence 1 0.009975
SETD7 SET domain containing (lysine methyltransferase) 7 0.009975
SYNPO2 synaptopodin 2 0.009975
AFF2 AF4/FMR2 family, member 2 0.004732
DDHD1 DDHD domain containing 1 0.002088
TAB3 TGF-beta activated kinase 1/MAP3K7 binding protein 3 0.002088