htt Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description huntingtin|Huntingtin is a disease gene linked to Huntington's disease, a neurodegenerative disorder characterized by loss of striatal neurons. This is thought to be caused by an expanded, unstable trinucleotide repeat in the huntingtin gene, which translates as a polyglutamine repeat in the protein product. A fairly broad range in the number of trinucleotide repeats has been identified in normal controls, and repeat numbers in excess of 40 have been described as pathological. The huntingtin locus is large, spanning 180 kb and consisting of 67 exons. The huntingtin gene is widely expressed and is required for normal development. It is expressed as 2 alternatively polyadenylated forms displaying different relative abundance in various fetal and adult tissues. The larger transcript is approximately 13.7 kb and is expressed predominantly in adult and fetal brain whereas the smaller transcript of approximately 10.3 kb is more widely expressed. The genetic defect leading to Huntington's disease may not necessarily eliminate transcription, but may confer a new property on the mRNA or alter the function of the protein. One candidate is the huntingtin-associated protein-1, highly expressed in brain, which has increased affinity for huntingtin protein with expanded polyglutamine repeats. This gene contains an upstream open reading frame in the 5' UTR that inhibits expression of the huntingtin gene product through translational repression. [provided by RefSeq, Jul 2008] (NCBI Entrez Gene Database, 3064)
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Genes

31 genes co-occuring with the biological term htt in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
AR androgen receptor
BECN1 beclin 1, autophagy related
CDK5 cyclin-dependent kinase 5
DNM1L dynamin 1-like
ERN1 endoplasmic reticulum to nucleus signaling 1
GAPDH glyceraldehyde-3-phosphate dehydrogenase
HAP1 huntingtin-associated protein 1
HSPA8 heat shock 70kDa protein 8
HTT huntingtin
HYPK huntingtin interacting protein K
LAMP2 lysosomal-associated membrane protein 2
MARVELD2 MARVEL domain containing 2
MIR137 microRNA 137
MIR146A microRNA 146a
MIR148A microRNA 148a
MIR150 microRNA 150
MIR214 microRNA 214
MIR22 microRNA 22
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PCM1 pericentriolar material 1
PFDN2 prefoldin subunit 2
PFDN5 prefoldin subunit 5
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOD1 superoxide dismutase 1, soluble
TFEB transcription factor EB
TGM2 transglutaminase 2
TP53 tumor protein p53
TPH2 tryptophan hydroxylase 2
XPC xeroderma pigmentosum, complementation group C
ZDHHC17 zinc finger, DHHC-type containing 17