infected Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

439 genes co-occuring with the biological term infected in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
AADAC arylacetamide deacetylase
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
ACO1 aconitase 1, soluble
ACTB actin, beta
ADAM17 ADAM metallopeptidase domain 17
ADD1 adducin 1 (alpha)
ADORA2B adenosine A2b receptor
ADRB2 adrenoceptor beta 2, surface
AGO2 argonaute RISC catalytic component 2
AKAP1 A kinase (PRKA) anchor protein 1
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALCAM activated leukocyte cell adhesion molecule
ALOX15 arachidonate 15-lipoxygenase
ALPL alkaline phosphatase, liver/bone/kidney
ANG angiogenin, ribonuclease, RNase A family, 5
ANPEP alanyl (membrane) aminopeptidase
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOC3 apolipoprotein C-III
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
AQP3 aquaporin 3 (Gill blood group)
ATG5 autophagy related 5
ATM ATM serine/threonine kinase
ATRX alpha thalassemia/mental retardation syndrome X-linked
AZU1 azurocidin 1
B3GAT1 beta-1,3-glucuronyltransferase 1
BAD BCL2-associated agonist of cell death
BAK1 BCL2-antagonist/killer 1
BAX BCL2-associated X protein
BCL2 B-cell CLL/lymphoma 2
BCL2A1 BCL2-related protein A1
BCL2L1 BCL2-like 1
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BCL2L2 BCL2-like 2
BCL6 B-cell CLL/lymphoma 6
BDKRB2 bradykinin receptor B2
BIRC3 baculoviral IAP repeat containing 3
BIRC5 baculoviral IAP repeat containing 5
BMF Bcl2 modifying factor
BRD2 bromodomain containing 2
BST2 bone marrow stromal cell antigen 2
C5AR1 complement component 5a receptor 1
CALCA calcitonin-related polypeptide alpha
CAMP cathelicidin antimicrobial peptide
CAPN2 calpain 2, (m/II) large subunit
CASP1 caspase 1, apoptosis-related cysteine peptidase
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASP6 caspase 6, apoptosis-related cysteine peptidase
CASP8 caspase 8, apoptosis-related cysteine peptidase
CASP9 caspase 9, apoptosis-related cysteine peptidase
CAV2 caveolin 2
CAV3 caveolin 3
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase
CCL17 chemokine (C-C motif) ligand 17
CCL2 chemokine (C-C motif) ligand 2
CCL3L1 chemokine (C-C motif) ligand 3-like 1
CCL5 chemokine (C-C motif) ligand 5
CCL8 chemokine (C-C motif) ligand 8
CCNB1 cyclin B1
CCND2 cyclin D2
CCR2 chemokine (C-C motif) receptor 2
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD14 CD14 molecule
CD163 CD163 molecule
CD19 CD19 molecule
CD2 CD2 molecule
CD209 CD209 molecule
CD274 CD274 molecule
CD36 CD36 molecule (thrombospondin receptor)
CD38 CD38 molecule
CD4 CD4 molecule
CD40LG CD40 ligand
CD46 CD46 molecule, complement regulatory protein
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group)
CD59 CD59 molecule, complement regulatory protein
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain
CD83 CD83 molecule
CD86 CD86 molecule
CDC25C cell division cycle 25C
CDC42 cell division cycle 42
CDK1 cyclin-dependent kinase 1
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDX2 caudal type homeobox 2
CENPB centromere protein B, 80kDa
CFL1 cofilin 1 (non-muscle)
CFL2 cofilin 2 (muscle)
CFLAR CASP8 and FADD-like apoptosis regulator
CLDN1 claudin 1
CLEC1B C-type lectin domain family 1, member B
CLEC4G C-type lectin domain family 4, member G
CLEC4M C-type lectin domain family 4, member M
CLEC5A C-type lectin domain family 5, member A
COMT catechol-O-methyltransferase
COX2
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CRABP2 cellular retinoic acid binding protein 2
CREB3L1 cAMP responsive element binding protein 3-like 1
CRP C-reactive protein, pentraxin-related
CSF2 colony stimulating factor 2 (granulocyte-macrophage)
CSNK2B casein kinase 2, beta polypeptide
CTGF connective tissue growth factor
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CTNND1 catenin (cadherin-associated protein), delta 1
CTSG cathepsin G
CTSH cathepsin H
CTSL cathepsin L
CTSS cathepsin S
CX3CR1 chemokine (C-X3-C motif) receptor 1
CXADR coxsackie virus and adenovirus receptor
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL11 chemokine (C-X-C motif) ligand 11
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL13 chemokine (C-X-C motif) ligand 13
CXCL8 chemokine (C-X-C motif) ligand 8
CXCL9 chemokine (C-X-C motif) ligand 9
CXCR1 chemokine (C-X-C motif) receptor 1
CXCR2 chemokine (C-X-C motif) receptor 2
CXCR4 chemokine (C-X-C motif) receptor 4
CXCR6 chemokine (C-X-C motif) receptor 6
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
CYP27B1 cytochrome P450, family 27, subfamily B, polypeptide 1
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6
CYP3A cytochrome P450, family 3, subfamily A
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4
CYR61 cysteine-rich, angiogenic inducer, 61
DAXX death-domain associated protein
DDR1 discoidin domain receptor tyrosine kinase 1
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DEFB1 defensin, beta 1
DEFB4A defensin, beta 4A
DIAPH2 diaphanous-related formin 2
DICER1 dicer 1, ribonuclease type III
DKK1 dickkopf WNT signaling pathway inhibitor 1
DLG1 discs, large homolog 1 (Drosophila)
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1
DRAM1 DNA-damage regulated autophagy modulator 1
DSC3 desmocollin 3
EBAG9 estrogen receptor binding site associated, antigen, 9
ECHS1 enoyl CoA hydratase, short chain, 1, mitochondrial
EDN1 endothelin 1
EGFR epidermal growth factor receptor
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
EIF4B eukaryotic translation initiation factor 4B
ELANE elastase, neutrophil expressed
EMD emerin
EOMES eomesodermin
ERBB2 erb-b2 receptor tyrosine kinase 2
ERN1 endoplasmic reticulum to nucleus signaling 1
ETF1 eukaryotic translation termination factor 1
F11R F11 receptor
FABP4 fatty acid binding protein 4, adipocyte
FAS Fas cell surface death receptor
FASLG Fas ligand (TNF superfamily, member 6)
FLOT2 flotillin 2
FOXP3 forkhead box P3
G3BP1 GTPase activating protein (SH3 domain) binding protein 1
GADD45A growth arrest and DNA-damage-inducible, alpha
GATA2 GATA binding protein 2
GHRL ghrelin/obestatin prepropeptide
GINS2 GINS complex subunit 2 (Psf2 homolog)
GJA1 gap junction protein, alpha 1, 43kDa
GLS2 glutaminase 2 (liver, mitochondrial)
GMNN geminin, DNA replication inhibitor
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1
GNLY granulysin
GP6 glycoprotein VI (platelet)
GPR15 G protein-coupled receptor 15
GPT glutamic-pyruvate transaminase (alanine aminotransferase)
GRB2 growth factor receptor-bound protein 2
GRIK5 glutamate receptor, ionotropic, kainate 5
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
H2AFX H2A histone family, member X
HAVCR1 hepatitis A virus cellular receptor 1
HAVCR2 hepatitis A virus cellular receptor 2
HBB hemoglobin, beta
HDAC3 histone deacetylase 3
HDAC6 histone deacetylase 6
HFE hemochromatosis
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HLA-A major histocompatibility complex, class I, A
HLA-B major histocompatibility complex, class I, B
HLA-C major histocompatibility complex, class I, C
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HLA-G major histocompatibility complex, class I, G
HMGA2 high mobility group AT-hook 2
HMGB1 high mobility group box 1
HMOX1 heme oxygenase 1
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H)
HNRNPK heterogeneous nuclear ribonucleoprotein K
HNRNPR heterogeneous nuclear ribonucleoprotein R
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
HRAS Harvey rat sarcoma viral oncogene homolog
HSPA1A heat shock 70kDa protein 1A
HSPA4 heat shock 70kDa protein 4
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HSPA8 heat shock 70kDa protein 8
HSPD1 heat shock 60kDa protein 1 (chaperonin)
HTRA2 HtrA serine peptidase 2
ICAM1 intercellular adhesion molecule 1
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
IDO1 indoleamine 2,3-dioxygenase 1
IFI16 interferon, gamma-inducible protein 16
IFIT1 interferon-induced protein with tetratricopeptide repeats 1
IFIT2 interferon-induced protein with tetratricopeptide repeats 2
IFN1@ interferon, type 1, cluster
IFNA1 interferon, alpha 1
IFNA2 interferon, alpha 2
IFNB1 interferon, beta 1, fibroblast
IFNG interferon, gamma
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1)
IFNL1 interferon, lambda 1
IFNL3 interferon, lambda 3
IFNL4 interferon, lambda 4 (gene/pseudogene)
IGF2 insulin-like growth factor 2
IL10 interleukin 10
IL12A interleukin 12A
IL12B interleukin 12B
IL13 interleukin 13
IL15 interleukin 15
IL16 interleukin 16
IL17A interleukin 17A
IL18 interleukin 18
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL1RN interleukin 1 receptor antagonist
IL2 interleukin 2
IL23A interleukin 23, alpha subunit p19
IL24 interleukin 24
IL27 interleukin 27
IL2RA interleukin 2 receptor, alpha
IL4 interleukin 4
IL6 interleukin 6
IL7 interleukin 7
IL7R interleukin 7 receptor
ILF3 interleukin enhancer binding factor 3, 90kDa
IRF1 interferon regulatory factor 1
IRF3 interferon regulatory factor 3
ITGAV integrin, alpha V
ITGB6 integrin, beta 6
ITK IL2-inducible T-cell kinase
KCNB1 potassium channel, voltage gated Shab related subfamily B, member 1
KIF1B kinesin family member 1B
KIR2DL2 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 2
KIR2DS2 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 2
KIR3DL1 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
KPNB1 karyopherin (importin) beta 1
LAMTOR5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
LCN2 lipocalin 2
LDLR low density lipoprotein receptor
LEP leptin
LGALS1 lectin, galactoside-binding, soluble, 1
LIG1 ligase I, DNA, ATP-dependent
LIG4 ligase IV, DNA, ATP-dependent
LMNA lamin A/C
LTBP1 latent transforming growth factor beta binding protein 1
M6PR mannose-6-phosphate receptor (cation dependent)
MAPK1 mitogen-activated protein kinase 1
MAPK12 mitogen-activated protein kinase 12
MAPK13 mitogen-activated protein kinase 13
MAPK14 mitogen-activated protein kinase 14
MAPK3 mitogen-activated protein kinase 3
MARCO macrophage receptor with collagenous structure
MAVS mitochondrial antiviral signaling protein
MBL2 mannose-binding lectin (protein C) 2, soluble
MCL1 myeloid cell leukemia 1
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR122 microRNA 122
MIR1260A microRNA 1260a
MIR146A microRNA 146a
MIR221 microRNA 221
MIR26A1 microRNA 26a-1
MIR26B microRNA 26b
MIR335 microRNA 335
MIR576 microRNA 576
MIR628 microRNA 628
MIR664A microRNA 664a
MIRLET7A1 microRNA let-7a-1
MIRLET7C microRNA let-7c
MMP1 matrix metallopeptidase 1
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP2 matrix metallopeptidase 2
MMP3 matrix metallopeptidase 3
MMP7 matrix metallopeptidase 7
MMP9 matrix metallopeptidase 9
MPL MPL proto-oncogene, thrombopoietin receptor
MRC1 mannose receptor, C type 1
MS4A1 membrane-spanning 4-domains, subfamily A, member 1
MSR1 macrophage scavenger receptor 1
MTTP microsomal triglyceride transfer protein
MVP major vault protein
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYD88 myeloid differentiation primary response 88
NAMPT nicotinamide phosphoribosyltransferase
NCR1 natural cytotoxicity triggering receptor 1
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NGF nerve growth factor (beta polypeptide)
NLRP3 NLR family, pyrin domain containing 3
NOD1 nucleotide-binding oligomerization domain containing 1
NOS2 nitric oxide synthase 2, inducible
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NR1H3 nuclear receptor subfamily 1, group H, member 3
NR4A1 nuclear receptor subfamily 4, group A, member 1
NTRK1 neurotrophic tyrosine kinase, receptor, type 1
NUP62 nucleoporin 62kDa
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
PABPC1 poly(A) binding protein, cytoplasmic 1
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2
PCBP2 poly(rC) binding protein 2
PDCD1 programmed cell death 1
PDCD1LG2 programmed cell death 1 ligand 2
PDCD6IP programmed cell death 6 interacting protein
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PDIA3 protein disulfide isomerase family A, member 3
PENK proenkephalin
PHB prohibitin
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PKD2 polycystic kidney disease 2 (autosomal dominant)
PLAU plasminogen activator, urokinase
PLAUR plasminogen activator, urokinase receptor
PLG plasminogen
PLIN1 perilipin 1
PLIN2 perilipin 2
PML promyelocytic leukemia
PNPLA3 patatin-like phospholipase domain containing 3
PPARA peroxisome proliferator-activated receptor alpha
PPARG peroxisome proliferator-activated receptor gamma
PPIA peptidylprolyl isomerase A (cyclophilin A)
PPP1R13L protein phosphatase 1, regulatory subunit 13 like
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme
PRDM1 PR domain containing 1, with ZNF domain
PRF1 perforin 1 (pore forming protein)
PRNP prion protein
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PSIP1 PC4 and SFRS1 interacting protein 1
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3
PTBP1 polypyrimidine tract binding protein 1
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa
PTGER4 prostaglandin E receptor 4 (subtype EP4)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTPRC protein tyrosine phosphatase, receptor type, C
PVR poliovirus receptor
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RB1 retinoblastoma 1
RBPJ recombination signal binding protein for immunoglobulin kappa J region
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RFC1 replication factor C (activator 1) 1, 145kDa
RHOD ras homolog family member D
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1
RNF115 ring finger protein 115
SAA1 serum amyloid A1
SAMHD1 SAM domain and HD domain 1
SAT1 spermidine/spermine N1-acetyltransferase 1
SELL selectin L
SELPLG selectin P ligand
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5
SFRP1 secreted frizzled-related protein 1
SFRP2 secreted frizzled-related protein 2
SFRP4 secreted frizzled-related protein 4
SH2D1A SH2 domain containing 1A
SH3KBP1 SH3-domain kinase binding protein 1
SLAMF6 SLAM family member 6
SLC18A1 solute carrier family 18 (vesicular monoamine transporter), member 1
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4
SLPI secretory leukocyte peptidase inhibitor
SMN1 survival of motor neuron 1, telomeric
SOCS1 suppressor of cytokine signaling 1
SOX2 SRY (sex determining region Y)-box 2
SPP1 secreted phosphoprotein 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced
SUMO1 small ubiquitin-like modifier 1
SWAP70 SWAP switching B-cell complex 70kDa subunit
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein
TBP TATA box binding protein
TCL1A T-cell leukemia/lymphoma 1A
TGFB1 transforming growth factor, beta 1
THBS1 thrombospondin 1
THPO thrombopoietin
TIMELESS timeless circadian clock
TIMP1 TIMP metallopeptidase inhibitor 1
TIRAP toll-interleukin 1 receptor (TIR) domain containing adaptor protein
TJP1 tight junction protein 1
TLR2 toll-like receptor 2
TLR3 toll-like receptor 3
TLR4 toll-like receptor 4
TLR8 toll-like receptor 8
TLR9 toll-like receptor 9
TMEM173 transmembrane protein 173
TMPRSS11E transmembrane protease, serine 11E
TMPRSS13 transmembrane protease, serine 13
TNF tumor necrosis factor
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4
TP53 tumor protein p53
TP53AIP1 tumor protein p53 regulated apoptosis inducing protein 1
TRAF2 TNF receptor-associated factor 2
TRAF3 TNF receptor-associated factor 3
TRAF5 TNF receptor-associated factor 5
TRAF6 TNF receptor-associated factor 6, E3 ubiquitin protein ligase
TREM1 triggering receptor expressed on myeloid cells 1
TRIM5 tripartite motif containing 5
TXNIP thioredoxin interacting protein
UBA1 ubiquitin-like modifier activating enzyme 1
UBA6 ubiquitin-like modifier activating enzyme 6
UBE2I ubiquitin-conjugating enzyme E2I
ULBP2 UL16 binding protein 2
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
VWF von Willebrand factor
XBP1 X-box binding protein 1
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase
XPC xeroderma pigmentosum, complementation group C
XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4
YY1 YY1 transcription factor
ZFP36 ZFP36 ring finger protein