layer Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

213 genes co-occuring with the biological term layer in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCB5 ATP-binding cassette, sub-family B (MDR/TAP), member 5
ACHE acetylcholinesterase (Yt blood group)
ADGRV1 adhesion G protein-coupled receptor V1
AGTR1 angiotensin II receptor, type 1
AICDA activation-induced cytidine deaminase
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALOX15 arachidonate 15-lipoxygenase
ALPL alkaline phosphatase, liver/bone/kidney
ANXA1 annexin A1
APOH apolipoprotein H (beta-2-glycoprotein I)
APOL2 apolipoprotein L, 2
APP amyloid beta (A4) precursor protein
CARTPT CART prepropeptide
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASP8 caspase 8, apoptosis-related cysteine peptidase
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase
CCK cholecystokinin
CCL5 chemokine (C-C motif) ligand 5
CCND1 cyclin D1
CD24 CD24 molecule
CD4 CD4 molecule
CD44 CD44 molecule (Indian blood group)
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast)
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)
CDKN2A cyclin-dependent kinase inhibitor 2A
CFLAR CASP8 and FADD-like apoptosis regulator
CHAT choline O-acetyltransferase
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CILP2 cartilage intermediate layer protein 2
CNR1 cannabinoid receptor 1 (brain)
COL4A1 collagen, type IV, alpha 1
COL6A4P1 collagen, type VI, alpha 4 pseudogene 1
COL6A4P2 collagen, type VI, alpha 4 pseudogene 2
COL6A5 collagen, type VI, alpha 5
COL6A6 collagen, type VI, alpha 6
CRX cone-rod homeobox
CSPG4 chondroitin sulfate proteoglycan 4
CUBN cubilin (intrinsic factor-cobalamin receptor)
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR1 chemokine (C-X-C motif) receptor 1
CXCR4 chemokine (C-X-C motif) receptor 4
CYLD cylindromatosis (turban tumor syndrome)
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DKK3 dickkopf WNT signaling pathway inhibitor 3
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3
DPF3 D4, zinc and double PHD fingers, family 3
DRD1 dopamine receptor D1
DSG2 desmoglein 2
DSG3 desmoglein 3
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
ENO1 enolase 1, (alpha)
EPCAM epithelial cell adhesion molecule
ERVW-1 endogenous retrovirus group W, member 1
ESRP1 epithelial splicing regulatory protein 1
ESRP2 epithelial splicing regulatory protein 2
F2RL1 coagulation factor II (thrombin) receptor-like 1
FADD Fas (TNFRSF6)-associated via death domain
FAF1 Fas (TNFRSF6) associated factor 1
FGF10 fibroblast growth factor 10
FLT1 fms-related tyrosine kinase 1
FMR1 fragile X mental retardation 1
FN1 fibronectin 1
FOS FBJ murine osteosarcoma viral oncogene homolog
FURIN furin (paired basic amino acid cleaving enzyme)
GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3
GABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5
GALNT3 polypeptide N-acetylgalactosaminyltransferase 3
GAP43 growth associated protein 43
GHRL ghrelin/obestatin prepropeptide
GHSR growth hormone secretagogue receptor
GJA1 gap junction protein, alpha 1, 43kDa
GJA4 gap junction protein, alpha 4, 37kDa
GNB5 guanine nucleotide binding protein (G protein), beta 5
GNL3 guanine nucleotide binding protein-like 3 (nucleolar)
GPR50 G protein-coupled receptor 50
GRIA2 glutamate receptor, ionotropic, AMPA 2
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
HAVCR1 hepatitis A virus cellular receptor 1
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HK2 hexokinase 2
HSPG2 heparan sulfate proteoglycan 2
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
HTR6 5-hydroxytryptamine (serotonin) receptor 6, G protein-coupled
IL10 interleukin 10
IL17A interleukin 17A
IL1A interleukin 1, alpha
IL7R interleukin 7 receptor
JUN jun proto-oncogene
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KRAS Kirsten rat sarcoma viral oncogene homolog
KRT10 keratin 10, type I
KRT14 keratin 14, type I
KRT5 keratin 5, type II
L3MBTL1 l(3)mbt-like 1 (Drosophila)
LAMP1 lysosomal-associated membrane protein 1
LAMP3 lysosomal-associated membrane protein 3
LAPTM4B lysosomal protein transmembrane 4 beta
LEFTY1 left-right determination factor 1
LEFTY2 left-right determination factor 2
LGI3 leucine-rich repeat LGI family, member 3
LRP12 low density lipoprotein receptor-related protein 12
LRP2 low density lipoprotein receptor-related protein 2
MAPK8 mitogen-activated protein kinase 8
MAPT microtubule-associated protein tau
MIR126 microRNA 126
MIR21 microRNA 21
MIR27B microRNA 27b
MIR302A microRNA 302a
MKI67 marker of proliferation Ki-67
MMP2 matrix metallopeptidase 2
MMP3 matrix metallopeptidase 3
MMP9 matrix metallopeptidase 9
MPL MPL proto-oncogene, thrombopoietin receptor
MSH6 mutS homolog 6
MTNR1B melatonin receptor 1B
MUC2 mucin 2, oligomeric mucus/gel-forming
NCK2 NCK adaptor protein 2
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NES nestin
NGB neuroglobin
NIPAL4 NIPA-like domain containing 4
NOS2 nitric oxide synthase 2, inducible
NOS3 nitric oxide synthase 3 (endothelial cell)
NOTCH1 notch 1
NRL neural retina leucine zipper
OPA1 optic atrophy 1 (autosomal dominant)
OPN1LW opsin 1 (cone pigments), long-wave-sensitive
OPN1MW2 opsin 1 (cone pigments), medium-wave-sensitive 2
OPN1SW opsin 1 (cone pigments), short-wave-sensitive
OTX2 orthodenticle homeobox 2
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
P2RY11 purinergic receptor P2Y, G-protein coupled, 11
PADI3 peptidyl arginine deiminase, type III
PAPPA2 pappalysin 2
PARD6A par-6 family cell polarity regulator alpha
PDPN podoplanin
PKP1 plakophilin 1
POU5F1 POU class 5 homeobox 1
PPARG peroxisome proliferator-activated receptor gamma
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PRELP proline/arginine-rich end leucine-rich repeat protein
PRG4 proteoglycan 4
PRNP prion protein
PRUNE2 prune homolog 2 (Drosophila)
PTEN phosphatase and tensin homolog
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa
PTGIR prostaglandin I2 (prostacyclin) receptor (IP)
PTPN14 protein tyrosine phosphatase, non-receptor type 14
PVALB parvalbumin
RELN reelin
RHO rhodopsin
RPE65 retinal pigment epithelium-specific protein 65kDa
RTN4 reticulon 4
RTN4R reticulon 4 receptor
RUNX1 runt-related transcription factor 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
RXRA retinoid X receptor, alpha
S100A3 S100 calcium binding protein A3
S100A8 S100 calcium binding protein A8
S100A9 S100 calcium binding protein A9
SCARB1 scavenger receptor class B, member 1
SCARB2 scavenger receptor class B, member 2
SCTR secretin receptor
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4
SHH sonic hedgehog
SIAH2 siah E3 ubiquitin protein ligase 2
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4
SOD2 superoxide dismutase 2, mitochondrial
SOX1 SRY (sex determining region Y)-box 1
SOX2 SRY (sex determining region Y)-box 2
SOX9 SRY (sex determining region Y)-box 9
SP1 Sp1 transcription factor
SPINT1 serine peptidase inhibitor, Kunitz type 1
SSTR2 somatostatin receptor 2
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STATH statherin
SULT2B1 sulfotransferase family, cytosolic, 2B, member 1
SYN1 synapsin I
TARDBP TAR DNA binding protein
TGFB1 transforming growth factor, beta 1
TGFBI transforming growth factor, beta-induced, 68kDa
TLR2 toll-like receptor 2
TLR4 toll-like receptor 4
TMPRSS11D transmembrane protease, serine 11D
TNF tumor necrosis factor
TNMD tenomodulin
TNNI2 troponin I type 2 (skeletal, fast)
TP53 tumor protein p53
TP63 tumor protein p63
TRIM33 tripartite motif containing 33
TRPM8 transient receptor potential cation channel, subfamily M, member 8
TSC22D1 TSC22 domain family, member 1
UBE2E3 ubiquitin-conjugating enzyme E2E 3
USH2A Usher syndrome 2A (autosomal recessive, mild)
USP13 ubiquitin specific peptidase 13 (isopeptidase T-3)
VEGFA vascular endothelial growth factor A
WNT3A wingless-type MMTV integration site family, member 3A
WT1 Wilms tumor 1
YY1 YY1 transcription factor
ZNF750 zinc finger protein 750