ligation Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

222 genes co-occuring with the biological term ligation in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ADAM10 ADAM metallopeptidase domain 10
ADAM17 ADAM metallopeptidase domain 17
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALOX5 arachidonate 5-lipoxygenase
ANGPT1 angiopoietin 1
ANGPT2 angiopoietin 2
APLF aprataxin and PNKP like factor
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOE apolipoprotein E
APTX aprataxin
BCL2 B-cell CLL/lymphoma 2
BCL2L1 BCL2-like 1
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BIRC3 baculoviral IAP repeat containing 3
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
C1QBP complement component 1, q subcomponent binding protein
C7ORF49 chromosome 7 open reading frame 49
C9ORF142 chromosome 9 open reading frame 142
CALR calreticulin
CASP8 caspase 8, apoptosis-related cysteine peptidase
CAV1 caveolin 1, caveolae protein, 22kDa
CCND1 cyclin D1
CCR3 chemokine (C-C motif) receptor 3
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD14 CD14 molecule
CD1D CD1d molecule
CD24 CD24 molecule
CD244 CD244 molecule, natural killer cell receptor 2B4
CD27 CD27 molecule
CD28 CD28 molecule
CD33 CD33 molecule
CD34 CD34 molecule
CD4 CD4 molecule
CD40 CD40 molecule, TNF receptor superfamily member 5
CD40LG CD40 ligand
CD44 CD44 molecule (Indian blood group)
CD46 CD46 molecule, complement regulatory protein
CD47 CD47 molecule
CD53 CD53 molecule
CD72 CD72 molecule
CD86 CD86 molecule
CD8A CD8a molecule
CDC42 cell division cycle 42
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CFHR1 complement factor H-related 1
CFLAR CASP8 and FADD-like apoptosis regulator
CPA2 carboxypeptidase A2 (pancreatic)
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like
CSF1 colony stimulating factor 1 (macrophage)
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CXCR4 chemokine (C-X-C motif) receptor 4
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1
DPP4 dipeptidyl-peptidase 4
EGFR epidermal growth factor receptor
F11R F11 receptor
FAS Fas cell surface death receptor
FASLG Fas ligand (TNF superfamily, member 6)
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
FLNA filamin A, alpha
FLT1 fms-related tyrosine kinase 1
FLT3 fms-related tyrosine kinase 3
FOXP3 forkhead box P3
FYN FYN proto-oncogene, Src family tyrosine kinase
GJB2 gap junction protein, beta 2, 26kDa
GOLGA3 golgin A3
GP1BA glycoprotein Ib (platelet), alpha polypeptide
GP6 glycoprotein VI (platelet)
GSK3B glycogen synthase kinase 3 beta
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HLA-C major histocompatibility complex, class I, C
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
ICAM1 intercellular adhesion molecule 1
ICOS inducible T-cell co-stimulator
IDO1 indoleamine 2,3-dioxygenase 1
IFNB1 interferon, beta 1, fibroblast
IFNG interferon, gamma
IL10 interleukin 10
IL13 interleukin 13
IL1B interleukin 1, beta
IL4 interleukin 4
IL5 interleukin 5
IL6 interleukin 6
INPPL1 inositol polyphosphate phosphatase-like 1
INS insulin
ISG15 ISG15 ubiquitin-like modifier
ITGA1 integrin, alpha 1
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
ITGA6 integrin, alpha 6
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)
ITGAV integrin, alpha V
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
ITGB4 integrin, beta 4
ITGB6 integrin, beta 6
JUN jun proto-oncogene
KIR2DS1 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 1
KIR2DS2 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 2
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KITLG KIT ligand
KLK3 kallikrein-related peptidase 3
KLRG1 killer cell lectin-like receptor subfamily G, member 1
L1CAM L1 cell adhesion molecule
LAMA5 laminin, alpha 5
LAT linker for activation of T cells
LCP2 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)
LIG1 ligase I, DNA, ATP-dependent
LIG3 ligase III, DNA, ATP-dependent
LIG4 ligase IV, DNA, ATP-dependent
LILRA6 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
LILRB1 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
LTBR lymphotoxin beta receptor (TNFR superfamily, member 3)
LYNX1 Ly6/neurotoxin 1
MAPK1 mitogen-activated protein kinase 1
MAPK14 mitogen-activated protein kinase 14
MAPK3 mitogen-activated protein kinase 3
MAVS mitochondrial antiviral signaling protein
MAX MYC associated factor X
MET MET proto-oncogene, receptor tyrosine kinase
MIB2 mindbomb E3 ubiquitin protein ligase 2
MIR143 microRNA 143
MMP9 matrix metallopeptidase 9
MNT MAX network transcriptional repressor
MRC1 mannose receptor, C type 1
MS4A1 membrane-spanning 4-domains, subfamily A, member 1
MUC1 mucin 1, cell surface associated
MUC16 mucin 16, cell surface associated
MYC v-myc avian myelocytomatosis viral oncogene homolog
NEDD8 neural precursor cell expressed, developmentally down-regulated 8
NF1 neurofibromin 1
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NHEJ1 nonhomologous end-joining factor 1
NLRP3 NLR family, pyrin domain containing 3
NOS3 nitric oxide synthase 3 (endothelial cell)
NPHS1 nephrosis 1, congenital, Finnish type (nephrin)
OSCAR osteoclast associated, immunoglobulin-like receptor
PDCD1 programmed cell death 1
PDIA2 protein disulfide isomerase family A, member 2
PECAM1 platelet/endothelial cell adhesion molecule 1
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
PLAU plasminogen activator, urokinase
PLAUR plasminogen activator, urokinase receptor
POLB polymerase (DNA directed), beta
POLL polymerase (DNA directed), lambda
PRKCQ protein kinase C, theta
PRKD1 protein kinase D1
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PROCR protein C receptor, endothelial
PROKR2 prokineticin receptor 2
PSMB8 proteasome (prosome, macropain) subunit, beta type, 8
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTPN1 protein tyrosine phosphatase, non-receptor type 1
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
PVR poliovirus receptor
RAB27B RAB27B, member RAS oncogene family
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
RASA1 RAS p21 protein activator (GTPase activating protein) 1
RASSF5 Ras association (RalGDS/AF-6) domain family member 5
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RFC1 replication factor C (activator 1) 1, 145kDa
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1
S100A9 S100 calcium binding protein A9
S1PR1 sphingosine-1-phosphate receptor 1
SDC4 syndecan 4
SELL selectin L
SELPLG selectin P ligand
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1
SIGLEC8 sialic acid binding Ig-like lectin 8
SIGLEC9 sialic acid binding Ig-like lectin 9
SIRT1 sirtuin 1
SKAP1 src kinase associated phosphoprotein 1
SLAMF1 signaling lymphocytic activation molecule family member 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SSB Sjogren syndrome antigen B (autoantigen La)
TBK1 TANK-binding kinase 1
TEK TEK tyrosine kinase, endothelial
TERF2IP telomeric repeat binding factor 2, interacting protein
TGFB1 transforming growth factor, beta 1
THBS1 thrombospondin 1
TIGIT T cell immunoreceptor with Ig and ITIM domains
TIRAP toll-interleukin 1 receptor (TIR) domain containing adaptor protein
TLR2 toll-like receptor 2
TLR3 toll-like receptor 3
TLR4 toll-like receptor 4
TLR5 toll-like receptor 5
TLR7 toll-like receptor 7
TLR9 toll-like receptor 9
TNF tumor necrosis factor
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B
TNFRSF4 tumor necrosis factor receptor superfamily, member 4
TNFRSF8 tumor necrosis factor receptor superfamily, member 8
TNFRSF9 tumor necrosis factor receptor superfamily, member 9
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14
TOP2A topoisomerase (DNA) II alpha 170kDa
TP53 tumor protein p53
TRAF2 TNF receptor-associated factor 2
TREM1 triggering receptor expressed on myeloid cells 1
TRIM21 tripartite motif containing 21
TSLIG1 tRNA splicing ligase complex subunit 1
VEGFA vascular endothelial growth factor A
VSTM1 V-set and transmembrane domain containing 1
VTN vitronectin
XBP1 X-box binding protein 1
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
ZAP70 zeta-chain (TCR) associated protein kinase 70kDa