links Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

456 genes co-occuring with the biological term links in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA2 ATP-binding cassette, sub-family A (ABC1), member 2
ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5
ABCG8 ATP-binding cassette, sub-family G (WHITE), member 8
ABI3 ABI family, member 3
ACD adrenocortical dysplasia homolog (mouse)
ACE angiotensin I converting enzyme
ACSS2 acyl-CoA synthetase short-chain family member 2
ACTR2 ARP2 actin-related protein 2 homolog (yeast)
ACTR3 ARP3 actin-related protein 3 homolog (yeast)
ADAM17 ADAM metallopeptidase domain 17
ADIPOQ adiponectin, C1Q and collagen domain containing
ADRB2 adrenoceptor beta 2, surface
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
AGER advanced glycosylation end product-specific receptor
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
AHI1 Abelson helper integration site 1
AKT1 v-akt murine thymoma viral oncogene homolog 1
ANGPTL4 angiopoietin-like 4
ANXA1 annexin A1
ANXA2 annexin A2
AP5B1 adaptor-related protein complex 5, beta 1 subunit
APC adenomatous polyposis coli
APLN apelin
APLNR apelin receptor
APOB apolipoprotein B
APP amyloid beta (A4) precursor protein
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
AR androgen receptor
ARF6 ADP-ribosylation factor 6
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
ASS1 argininosuccinate synthase 1
ATF4 activating transcription factor 4
ATG5 autophagy related 5
ATM ATM serine/threonine kinase
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1
AURKB aurora kinase B
BABAM1 BRISC and BRCA1 A complex member 1
BAIAP2 BAI1-associated protein 2
BAK1 BCL2-antagonist/killer 1
BAX BCL2-associated X protein
BCL10 B-cell CLL/lymphoma 10
BCL2 B-cell CLL/lymphoma 2
BCL6 B-cell CLL/lymphoma 6
BDKRB1 bradykinin receptor B1
BDKRB2 bradykinin receptor B2
BIRC2 baculoviral IAP repeat containing 2
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
BTG2 BTG family, member 2
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B
C4B complement component 4B (Chido blood group)
CALM1 calmodulin 1 (phosphorylase kinase, delta)
CAPN1 calpain 1, (mu/I) large subunit
CASP1 caspase 1, apoptosis-related cysteine peptidase
CASP3 caspase 3, apoptosis-related cysteine peptidase
CBX5 chromobox homolog 5
CCL1 chemokine (C-C motif) ligand 1
CCL13 chemokine (C-C motif) ligand 13
CCL18 chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)
CCND1 cyclin D1
CCR8 chemokine (C-C motif) receptor 8
CD151 CD151 molecule (Raph blood group)
CD244 CD244 molecule, natural killer cell receptor 2B4
CD274 CD274 molecule
CD28 CD28 molecule
CD2AP CD2-associated protein
CD40 CD40 molecule, TNF receptor superfamily member 5
CD63 CD63 molecule
CD9 CD9 molecule
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like)
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH13 cadherin 13
CDH23 cadherin-related 23
CDHR2 cadherin-related family member 2
CDHR5 cadherin-related family member 5
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CEP55 centrosomal protein 55kDa
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHEK2 checkpoint kinase 2
CMIP c-Maf inducing protein
CMTX3 Charcot-Marie-Tooth neuropathy, X-linked 3 (dominant)
COPS5 COP9 signalosome subunit 5
COX4I1 cytochrome c oxidase subunit IV isoform 1
CP ceruloplasmin (ferroxidase)
CREM cAMP responsive element modulator
CRK v-crk avian sarcoma virus CT10 oncogene homolog
CRYAB crystallin, alpha B
CTCF CCCTC-binding factor (zinc finger protein)
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa
CTNND1 catenin (cadherin-associated protein), delta 1
CTTN cortactin
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL14 chemokine (C-X-C motif) ligand 14
CXCR4 chemokine (C-X-C motif) receptor 4
CYBB cytochrome b-245, beta polypeptide
CYLD cylindromatosis (turban tumor syndrome)
DCDC5 doublecortin domain containing 5
DDIT3 DNA-damage-inducible transcript 3
DEFB4A defensin, beta 4A
DHH desert hedgehog
DLC1 DLC1 Rho GTPase activating protein
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11
DOCK1 dedicator of cytokinesis 1
DOCK3 dedicator of cytokinesis 3
DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1)
DOT1L DOT1-like histone H3K79 methyltransferase
DPYSL2 dihydropyrimidinase-like 2
DRAM1 DNA-damage regulated autophagy modulator 1
DYNLL1 dynein, light chain, LC8-type 1
EDARADD EDAR-associated death domain
EDN1 endothelin 1
EGFR epidermal growth factor receptor
EGLN1 egl-9 family hypoxia-inducible factor 1
ELAVL1 ELAV like RNA binding protein 1
ELMOD3 ELMO/CED-12 domain containing 3
EMD emerin
EOMES eomesodermin
EP300 E1A binding protein p300
EPAS1 endothelial PAS domain protein 1
EPO erythropoietin
ESR1 estrogen receptor 1
ESRRA estrogen-related receptor alpha
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
F2 coagulation factor II (thrombin)
FADS2 fatty acid desaturase 2
FAF1 Fas (TNFRSF6) associated factor 1
FAM132B family with sequence similarity 132, member B
FAM21C family with sequence similarity 21, member C
FANCM Fanconi anemia, complementation group M
FAS Fas cell surface death receptor
FERMT1 fermitin family member 1
FGFR2 fibroblast growth factor receptor 2
FLNA filamin A, alpha
FLNB filamin B, beta
FLNC filamin C, gamma
FOXO1 forkhead box O1
FOXP3 forkhead box P3
FPR1 formyl peptide receptor 1
FSHR follicle stimulating hormone receptor
FURIN furin (paired basic amino acid cleaving enzyme)
FZD1 frizzled class receptor 1
GAP43 growth associated protein 43
GATA3 GATA binding protein 3
GATA6 GATA binding protein 6
GCOM1 GRINL1A complex locus 1
GFER growth factor, augmenter of liver regeneration
GH1 growth hormone 1
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GJA1 gap junction protein, alpha 1, 43kDa
GLTP glycolipid transfer protein
GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
GNRHR gonadotropin-releasing hormone receptor
GOLPH3 golgi phosphoprotein 3 (coat-protein)
GPD1L glycerol-3-phosphate dehydrogenase 1-like
GSTM1 glutathione S-transferase mu 1
GSTP1 glutathione S-transferase pi 1
GSTT1 glutathione S-transferase theta 1
GTF2B general transcription factor IIB
HAMP hepcidin antimicrobial peptide
HCFC1 host cell factor C1
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIST3H3 histone cluster 3, H3
HMGB1 high mobility group box 1
HNF1A HNF1 homeobox A
HNF4A hepatocyte nuclear factor 4, alpha
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HOPX HOP homeobox
HOXC9 homeobox C9
HRAS Harvey rat sarcoma viral oncogene homolog
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
HTT huntingtin
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase
ICAM1 intercellular adhesion molecule 1
IDE insulin-degrading enzyme
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IFNG interferon, gamma
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL15 interleukin 15
IL17A interleukin 17A
IL18 interleukin 18
IL1B interleukin 1, beta
IL2 interleukin 2
IL2RB interleukin 2 receptor, beta
IL2RG interleukin 2 receptor, gamma
IL33 interleukin 33
IL6 interleukin 6
ILK integrin-linked kinase
INSL3 insulin-like 3 (Leydig cell)
IQSEC1 IQ motif and Sec7 domain 1
IRG1 immunoresponsive 1 homolog (mouse)
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITGA6 integrin, alpha 6
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
ITM2A integral membrane protein 2A
JMY junction mediating and regulatory protein, p53 cofactor
JUND jun D proto-oncogene
KAT5 K(lysine) acetyltransferase 5
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2
KCNJ6 potassium channel, inwardly rectifying subfamily J, member 6
KIAA1456 KIAA1456
KIAA1524 KIAA1524
KIDINS220 kinase D-interacting substrate, 220kDa
KIF11 kinesin family member 11
KIF5B kinesin family member 5B
KLF4 Kruppel-like factor 4 (gut)
KLF6 Kruppel-like factor 6
KRAS Kirsten rat sarcoma viral oncogene homolog
L1CAM L1 cell adhesion molecule
LAT2 linker for activation of T cells family, member 2
LCP2 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)
LEP leptin
LGALS9 lectin, galactoside-binding, soluble, 9
LIMK1 LIM domain kinase 1
LIMK2 LIM domain kinase 2
LIN28A lin-28 homolog A (C. elegans)
LIN9 lin-9 DREAM MuvB core complex component
LMNA lamin A/C
LMTK2 lemur tyrosine kinase 2
LPP LIM domain containing preferred translocation partner in lipoma
LRIF1 ligand dependent nuclear receptor interacting factor 1
LYN LYN proto-oncogene, Src family tyrosine kinase
LYPLA1 lysophospholipase I
LYPLA2 lysophospholipase II
MACC1 metastasis associated in colon cancer 1
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAGEA11 melanoma antigen family A11
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MARK2 MAP/microtubule affinity-regulating kinase 2
MBD1 methyl-CpG binding domain protein 1
MCPH1 microcephalin 1
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MEF2C myocyte enhancer factor 2C
MEX3C mex-3 RNA binding family member C
MGEA5 meningioma expressed antigen 5 (hyaluronidase)
MIR155 microRNA 155
MIR181B1 microRNA 181b-1
MIR21 microRNA 21
MIR210 microRNA 210
MIR217 microRNA 217
MIR224 microRNA 224
MIR30B microRNA 30b
MIR363 microRNA 363
MIRLET7A1 microRNA let-7a-1
MISP mitotic spindle positioning
MITF microphthalmia-associated transcription factor
MLPH melanophilin
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP2 matrix metallopeptidase 2
MMP9 matrix metallopeptidase 9
MPO myeloperoxidase
MPP1 membrane protein, palmitoylated 1, 55kDa
MRC1 mannose receptor, C type 1
MSN moesin
MTAP methylthioadenosine phosphorylase
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYBPC3 myosin binding protein C, cardiac
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
NAT2 N-acetyltransferase 2 (arylamine N-acetyltransferase)
NBAS neuroblastoma amplified sequence
NBN nibrin
NCOA3 nuclear receptor coactivator 3
NCOR1 nuclear receptor corepressor 1
NECAP1 NECAP endocytosis associated 1
NF1 neurofibromin 1
NF2 neurofibromin 2 (merlin)
NFE2L2 nuclear factor, erythroid 2-like 2
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NIT2 nitrilase family, member 2
NKX2-1 NK2 homeobox 1
NLRP12 NLR family, pyrin domain containing 12
NOD2 nucleotide-binding oligomerization domain containing 2
NOS1 nitric oxide synthase 1 (neuronal)
NOS3 nitric oxide synthase 3 (endothelial cell)
NOV nephroblastoma overexpressed
NOX4 NADPH oxidase 4
NPAT nuclear protein, ataxia-telangiectasia locus
NPY1R neuropeptide Y receptor Y1
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NUCB2 nucleobindin 2
NUMA1 nuclear mitotic apparatus protein 1
NXF1 nuclear RNA export factor 1
OXSR1 oxidative stress responsive 1
OXT oxytocin/neurophysin I prepropeptide
PACS2 phosphofurin acidic cluster sorting protein 2
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PARK2 parkin RBR E3 ubiquitin protein ligase
PARVB parvin, beta
PAX2 paired box 2
PDCD1 programmed cell death 1
PDK1 pyruvate dehydrogenase kinase, isozyme 1
PDPN podoplanin
PER2 period circadian clock 2
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2
PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
PIKFYVE phosphoinositide kinase, FYVE finger containing
PITX2 paired-like homeodomain 2
PKD2 polycystic kidney disease 2 (autosomal dominant)
PKM pyruvate kinase, muscle
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid)
PLK1 polo-like kinase 1
PML promyelocytic leukemia
POGZ pogo transposable element with ZNF domain
POLG polymerase (DNA directed), gamma
POU3F2 POU class 3 homeobox 2
PPARG peroxisome proliferator-activated receptor gamma
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A
PREX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
PRKCA protein kinase C, alpha
PRKCD protein kinase C, delta
PRKCE protein kinase C, epsilon
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PRNP prion protein
PRR5L proline rich 5 like
PSRC1 proline/serine-rich coiled-coil 1
PTEN phosphatase and tensin homolog
PTPN1 protein tyrosine phosphatase, non-receptor type 1
PTPN11 protein tyrosine phosphatase, non-receptor type 11
PTPRA protein tyrosine phosphatase, receptor type, A
RAB36 RAB36, member RAS oncogene family
RAB8A RAB8A, member RAS oncogene family
RAB9A RAB9A, member RAS oncogene family
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
RACGAP1 Rac GTPase activating protein 1
RAD51 RAD51 recombinase
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RANBP3 RAN binding protein 3
RARRES2 retinoic acid receptor responder (tazarotene induced) 2
RB1 retinoblastoma 1
RBP4 retinol binding protein 4, plasma
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
REST RE1-silencing transcription factor
RGS2 regulator of G-protein signaling 2
RHOA ras homolog family member A
RICTOR RPTOR independent companion of MTOR, complex 2
RINT1 RAD50 interactor 1
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1
RIPK2 receptor-interacting serine-threonine kinase 2
RNF111 ring finger protein 111
RNF187 ring finger protein 187
ROCK1 Rho-associated, coiled-coil containing protein kinase 1
ROMO1 reactive oxygen species modulator 1
RRAS2 related RAS viral (r-ras) oncogene homolog 2
RSU1 Ras suppressor protein 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
S100A12 S100 calcium binding protein A12
S100B S100 calcium binding protein B
S1PR1 sphingosine-1-phosphate receptor 1
SCLT1 sodium channel and clathrin linker 1
SCN5A sodium channel, voltage gated, type V alpha subunit
SCRIB scribbled planar cell polarity protein
SELP selectin P (granule membrane protein 140kDa, antigen CD62)
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SGSM1 small G protein signaling modulator 1
SH2D1A SH2 domain containing 1A
SH2D2A SH2 domain containing 2A
SH3BP2 SH3-domain binding protein 2
SHB Src homology 2 domain containing adaptor protein B
SIK1 salt-inducible kinase 1
SIRT1 sirtuin 1
SLC12A1 solute carrier family 12 (sodium/potassium/chloride transporter), member 1
SLC25A12 solute carrier family 25 (aspartate/glutamate carrier), member 12
SLC26A3 solute carrier family 26 (anion exchanger), member 3
SLC26A4 solute carrier family 26 (anion exchanger), member 4
SLC28A2 solute carrier family 28 (concentrative nucleoside transporter), member 2
SLC38A2 solute carrier family 38, member 2
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
SMAD7 SMAD family member 7
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1
SMURF1 SMAD specific E3 ubiquitin protein ligase 1
SNAI2 snail family zinc finger 2
SNAPIN SNAP-associated protein
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOX10 SRY (sex determining region Y)-box 10
SOX9 SRY (sex determining region Y)-box 9
SP1 Sp1 transcription factor
SPAG9 sperm associated antigen 9
SPHK1 sphingosine kinase 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SREBF1 sterol regulatory element binding transcription factor 1
SRI sorcin
SRSF7 serine/arginine-rich splicing factor 7
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced
STIM1 stromal interaction molecule 1
STK11 serine/threonine kinase 11
STK25 serine/threonine kinase 25
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila)
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
TBRG1 transforming growth factor beta regulator 1
TBX21 T-box 21
TEK TEK tyrosine kinase, endothelial
TFEB transcription factor EB
TGFBR1 transforming growth factor, beta receptor 1
TH tyrosine hydroxylase
TLR4 toll-like receptor 4
TLR9 toll-like receptor 9
TNF tumor necrosis factor
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFAIP8 tumor necrosis factor, alpha-induced protein 8
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TNIP1 TNFAIP3 interacting protein 1
TOLLIP toll interacting protein
TOM1 target of myb1 (chicken)
TP53 tumor protein p53
TP63 tumor protein p63
TPP1 tripeptidyl peptidase I
TRAF6 TNF receptor-associated factor 6, E3 ubiquitin protein ligase
TRIP6 thyroid hormone receptor interactor 6
TRPC5 transient receptor potential cation channel, subfamily C, member 5
TRPC6 transient receptor potential cation channel, subfamily C, member 6
UBE3A ubiquitin protein ligase E3A
UBIAD1 UbiA prenyltransferase domain containing 1
UBXN7 UBX domain protein 7
UCP1 uncoupling protein 1 (mitochondrial, proton carrier)
UHRF1 ubiquitin-like with PHD and ring finger domains 1
UIMC1 ubiquitin interaction motif containing 1
USE1 unconventional SNARE in the ER 1 homolog (S. cerevisiae)
USF1 upstream transcription factor 1
USP37 ubiquitin specific peptidase 37
VAV1 vav 1 guanine nucleotide exchange factor
VCP valosin containing protein
WASH1 WAS protein family homolog 1
WHSC1 Wolf-Hirschhorn syndrome candidate 1
WNK1 WNK lysine deficient protein kinase 1
WWOX WW domain containing oxidoreductase
XBP1 X-box binding protein 1
YAP1 Yes-associated protein 1
YARS tyrosyl-tRNA synthetase
YBX3 Y box binding protein 3
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
ZFHX3 zinc finger homeobox 3
ZFP36 ZFP36 ring finger protein
ZMYND11 zinc finger, MYND-type containing 11
ZNF668 zinc finger protein 668
ZNF750 zinc finger protein 750
ZNHIT1 zinc finger, HIT-type containing 1
ZW10 zw10 kinetochore protein