lysine Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

354 genes co-occuring with the biological term lysine in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABAT 4-aminobutyrate aminotransferase
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1
ADIPOQ adiponectin, C1Q and collagen domain containing
AHCY adenosylhomocysteinase
AHCYL1 adenosylhomocysteinase-like 1
AICDA activation-induced cytidine deaminase
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALB albumin
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ALDH7A1 aldehyde dehydrogenase 7 family, member A1
ALKBH1 alkB, alkylation repair homolog 1 (E. coli)
ALOX5 arachidonate 5-lipoxygenase
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
APOA1 apolipoprotein A-I
APOB apolipoprotein B
APOE apolipoprotein E
APOH apolipoprotein H (beta-2-glycoprotein I)
APP amyloid beta (A4) precursor protein
AR androgen receptor
AREG amphiregulin
ARHGAP21 Rho GTPase activating protein 21
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila)
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
ATAT1 alpha tubulin acetyltransferase 1
ATM ATM serine/threonine kinase
ATXN3 ataxin 3
AVPR2 arginine vasopressin receptor 2
BACE1 beta-site APP-cleaving enzyme 1
BAG6 BCL2-associated athanogene 6
BAZ2A bromodomain adjacent to zinc finger domain, 2A
BCL2L10 BCL2-like 10 (apoptosis facilitator)
BCL9 B-cell CLL/lymphoma 9
BIRC5 baculoviral IAP repeat containing 5
BLOC1S1 biogenesis of lysosomal organelles complex-1, subunit 1
BMI1 BMI1 proto-oncogene, polycomb ring finger
BMP6 bone morphogenetic protein 6
BRD4 bromodomain containing 4
BRIP1 BRCA1 interacting protein C-terminal helicase 1
BTRC beta-transducin repeat containing E3 ubiquitin protein ligase
CARM1 coactivator-associated arginine methyltransferase 1
CASP7 caspase 7, apoptosis-related cysteine peptidase
CASP8 caspase 8, apoptosis-related cysteine peptidase
CBX1 chromobox homolog 1
CBX5 chromobox homolog 5
CD3G CD3g molecule, gamma (CD3-TCR complex)
CDC6 cell division cycle 6
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDK7 cyclin-dependent kinase 7
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CLDN5 claudin 5
CLEC2D C-type lectin domain family 2, member D
COL1A2 collagen, type I, alpha 2
CPB2 carboxypeptidase B2 (plasma)
CPM carboxypeptidase M
CREBBP CREB binding protein
CRYAA crystallin, alpha A
CRYAB crystallin, alpha B
CRYGD crystallin, gamma D
CSF2RB colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
CSF3R colony stimulating factor 3 receptor (granulocyte)
CTBP1 C-terminal binding protein 1
CTCF CCCTC-binding factor (zinc finger protein)
CXCL12 chemokine (C-X-C motif) ligand 12
CYBB cytochrome b-245, beta polypeptide
DBET D4Z4 binding element transcript (non-protein coding)
DGCR8 DGCR8 microprocessor complex subunit
DHFR dihydrofolate reductase
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9
DKK1 dickkopf WNT signaling pathway inhibitor 1
DMC1 DNA meiotic recombinase 1
DNMT1 DNA (cytosine-5-)-methyltransferase 1
DOT1L DOT1-like histone H3K79 methyltransferase
DROSHA drosha, ribonuclease type III
DZIP3 DAZ interacting zinc finger protein 3
EED embryonic ectoderm development
EEF2KMT eukaryotic elongation factor 2 lysine methyltransferase
EGFR epidermal growth factor receptor
EHMT1 euchromatic histone-lysine N-methyltransferase 1
EHMT2 euchromatic histone-lysine N-methyltransferase 2
ELN elastin
EOMES eomesodermin
EP300 E1A binding protein p300
EPB41 erythrocyte membrane protein band 4.1
EPOR erythropoietin receptor
ERBB2 erb-b2 receptor tyrosine kinase 2
ESR1 estrogen receptor 1
ETFB electron-transfer-flavoprotein, beta polypeptide
ETV1 ets variant 1
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
F13A1 coagulation factor XIII, A1 polypeptide
F2 coagulation factor II (thrombin)
FAAH fatty acid amide hydrolase
FANCD2 Fanconi anemia, complementation group D2
FBXL4 F-box and leucine-rich repeat protein 4
FCGR2C Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)
FDFT1 farnesyl-diphosphate farnesyltransferase 1
FGB fibrinogen beta chain
FGF23 fibroblast growth factor 23
FGFR3 fibroblast growth factor receptor 3
FGG fibrinogen gamma chain
FLI1 Fli-1 proto-oncogene, ETS transcription factor
FLT1 fms-related tyrosine kinase 1
FMR1 fragile X mental retardation 1
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FOXA1 forkhead box A1
FSHMD1A facioscapulohumeral muscular dystrophy 1A
GABRA1 gamma-aminobutyric acid (GABA) A receptor, alpha 1
GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2
GABRG2 gamma-aminobutyric acid (GABA) A receptor, gamma 2
GBA glucosidase, beta, acid
GLI2 GLI family zinc finger 2
GNAT2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
H2AFX H2A histone family, member X
H2AFZ H2A histone family, member Z
H3F3A H3 histone, family 3A
HBA2 hemoglobin, alpha 2
HCFC1 host cell factor C1
HDAC1 histone deacetylase 1
HDAC3 histone deacetylase 3
HDAC4 histone deacetylase 4
HDAC6 histone deacetylase 6
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIST1H1E histone cluster 1, H1e
HIST2H2AC histone cluster 2, H2ac
HIST2H2BE histone cluster 2, H2be
HIST2H3A histone cluster 2, H3a
HIST2H3C histone cluster 2, H3c
HIST3H3 histone cluster 3, H3
HIST4H4 histone cluster 4, H4
HLA-A major histocompatibility complex, class I, A
HLA-B major histocompatibility complex, class I, B
HLA-DRA major histocompatibility complex, class II, DR alpha
HLCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)
HMGN2 high mobility group nucleosomal binding domain 2
HNRNPL heterogeneous nuclear ribonucleoprotein L
HOXD9 homeobox D9
HSD11B2 hydroxysteroid (11-beta) dehydrogenase 2
HSPA8 heat shock 70kDa protein 8
HSPB1 heat shock 27kDa protein 1
HTN3 histatin 3
HTT huntingtin
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IDS iduronate 2-sulfatase
IL17RD interleukin 17 receptor D
IL24 interleukin 24
IRF7 interferon regulatory factor 7
IRF8 interferon regulatory factor 8
ITCH itchy E3 ubiquitin protein ligase
KAT2A K(lysine) acetyltransferase 2A
KAT2B K(lysine) acetyltransferase 2B
KAT5 K(lysine) acetyltransferase 5
KAT6B K(lysine) acetyltransferase 6B
KAT7 K(lysine) acetyltransferase 7
KAT8 K(lysine) acetyltransferase 8
KCNB1 potassium channel, voltage gated Shab related subfamily B, member 1
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNQ1OT1 KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)
KDM1A lysine (K)-specific demethylase 1A
KDM2A lysine (K)-specific demethylase 2A
KDM4A lysine (K)-specific demethylase 4A
KDM4C lysine (K)-specific demethylase 4C
KDM5A lysine (K)-specific demethylase 5A
KDM5B lysine (K)-specific demethylase 5B
KDM5C lysine (K)-specific demethylase 5C
KDM5D lysine (K)-specific demethylase 5D
KDM6A lysine (K)-specific demethylase 6A
KDM6B lysine (K)-specific demethylase 6B
KIAA0101 KIAA0101
KLF10 Kruppel-like factor 10
KLF4 Kruppel-like factor 4 (gut)
KLK12 kallikrein-related peptidase 12
KMT2A lysine (K)-specific methyltransferase 2A
KMT2B lysine (K)-specific methyltransferase 2B
KMT2C lysine (K)-specific methyltransferase 2C
KMT2D lysine (K)-specific methyltransferase 2D
KNG1 kininogen 1
KRAS Kirsten rat sarcoma viral oncogene homolog
KRT83 keratin 83, type II
L3MBTL1 l(3)mbt-like 1 (Drosophila)
L3MBTL2 l(3)mbt-like 2 (Drosophila)
LDLR low density lipoprotein receptor
LGALS3 lectin, galactoside-binding, soluble, 3
LIG4 ligase IV, DNA, ATP-dependent
LRP1 low density lipoprotein receptor-related protein 1
LRPAP1 low density lipoprotein receptor-related protein associated protein 1
LRSAM1 leucine rich repeat and sterile alpha motif containing 1
LRWD1 leucine-rich repeats and WD repeat domain containing 1
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MAP3K7 mitogen-activated protein kinase kinase kinase 7
MAPK6 mitogen-activated protein kinase 6
MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1
MAPT microtubule-associated protein tau
MAVS mitochondrial antiviral signaling protein
MCL1 myeloid cell leukemia 1
MEF2D myocyte enhancer factor 2D
MEN1 multiple endocrine neoplasia I
METTL20 methyltransferase like 20
METTL21A methyltransferase like 21A
METTL21B methyltransferase like 21B
MICB MHC class I polypeptide-related sequence B
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
MSL2 male-specific lethal 2 homolog (Drosophila)
MT-TK tRNA
MYC v-myc avian myelocytomatosis viral oncogene homolog
NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit
NADK2 NAD kinase 2, mitochondrial
NCOA6 nuclear receptor coactivator 6
NCOR1 nuclear receptor corepressor 1
NEDD8 neural precursor cell expressed, developmentally down-regulated 8
NEU2 sialidase 2 (cytosolic sialidase)
NEUROD1 neuronal differentiation 1
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NLRP3 NLR family, pyrin domain containing 3
NOG noggin
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain)
NPC1L1 NPC1-like 1
NR1H4 nuclear receptor subfamily 1, group H, member 4
NR1I3 nuclear receptor subfamily 1, group I, member 3
NR2C2 nuclear receptor subfamily 2, group C, member 2
NSD1 nuclear receptor binding SET domain protein 1
ODC1 ornithine decarboxylase 1
OGT O-linked N-acetylglucosamine (GlcNAc) transferase
OXSR1 oxidative stress responsive 1
P2RY12 purinergic receptor P2Y, G-protein coupled, 12
PARK2 parkin RBR E3 ubiquitin protein ligase
PARK7 parkinson protein 7
PARP1 poly (ADP-ribose) polymerase 1
PARP2 poly (ADP-ribose) polymerase 2
PBRM1 polybromo 1
PCGF6 polycomb group ring finger 6
PCNA proliferating cell nuclear antigen
PGD phosphogluconate dehydrogenase
PHF8 PHD finger protein 8
PIAS1 protein inhibitor of activated STAT, 1
PICALM phosphatidylinositol binding clathrin assembly protein
PIP5K1C phosphatidylinositol-4-phosphate 5-kinase, type I, gamma
PITX2 paired-like homeodomain 2
PKLR pyruvate kinase, liver and RBC
PLAT plasminogen activator, tissue
PLAU plasminogen activator, urokinase
PLG plasminogen
PML promyelocytic leukemia
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta
PRDM2 PR domain containing 2, with ZNF domain
PRDM9 PR domain containing 9
PRDX4 peroxiredoxin 4
PRF1 perforin 1 (pore forming protein)
PRNP prion protein
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PROCR protein C receptor, endothelial
PROM1 prominin 1
PSG5 pregnancy specific beta-1-glycoprotein 5
PSIP1 PC4 and SFRS1 interacting protein 1
PYGO1 pygopus family PHD finger 1
PYGO2 pygopus family PHD finger 2
RAD18 RAD18 E3 ubiquitin protein ligase
RARA retinoic acid receptor, alpha
RASSF1 Ras association (RalGDS/AF-6) domain family member 1
RB1 retinoblastoma 1
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RELB v-rel avian reticuloendotheliosis viral oncogene homolog B
RNF126 ring finger protein 126
RNF20 ring finger protein 20, E3 ubiquitin protein ligase
RUNX1 runt-related transcription factor 1
RUVBL2 RuvB-like AAA ATPase 2
SCML2 sex comb on midleg-like 2 (Drosophila)
SCN5A sodium channel, voltage gated, type V alpha subunit
SEC24C SEC24 family member C
SELPLG selectin P ligand
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1
SETD2 SET domain containing 2
SETD6 SET domain containing 6
SETD7 SET domain containing (lysine methyltransferase) 7
SETD8 SET domain containing (lysine methyltransferase) 8
SETD8P1 SET domain containing 8 pseudogene 1
SETDB1 SET domain, bifurcated 1
SGK1 serum/glucocorticoid regulated kinase 1
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SIRT1 sirtuin 1
SIRT2 sirtuin 2
SIRT5 sirtuin 5
SIRT6 sirtuin 6
SKP1 S-phase kinase-associated protein 1
SLC12A1 solute carrier family 12 (sodium/potassium/chloride transporter), member 1
SLC25A4 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
SLC5A2 solute carrier family 5 (sodium/glucose cotransporter), member 2
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5
SMAD3 SMAD family member 3
SMAD4 SMAD family member 4
SMYD2 SET and MYND domain containing 2
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SP1 Sp1 transcription factor
SPI1 Spi-1 proto-oncogene
SQSTM1 sequestosome 1
SS18 synovial sarcoma translocation, chromosome 18
STIM1 stromal interaction molecule 1
STIM2 stromal interaction molecule 2
STK11 serine/threonine kinase 11
SUB1 SUB1 homolog (S. cerevisiae)
SUMO1 small ubiquitin-like modifier 1
SUMO2 small ubiquitin-like modifier 2
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila)
SUV420H2 suppressor of variegation 4-20 homolog 2 (Drosophila)
TCERG1 transcription elongation regulator 1
TCF3 transcription factor 3
TGFB1 transforming growth factor, beta 1
TGM2 transglutaminase 2
THBD thrombomodulin
THRA thyroid hormone receptor, alpha
TNF tumor necrosis factor
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TOP2B topoisomerase (DNA) II beta 180kDa
TP53 tumor protein p53
TP53BP1 tumor protein p53 binding protein 1
TP73 tumor protein p73
TRAF6 TNF receptor-associated factor 6, E3 ubiquitin protein ligase
TRDMT1 tRNA aspartic acid methyltransferase 1
TRIM25 tripartite motif containing 25
TRIM29 tripartite motif containing 29
TRIM33 tripartite motif containing 33
TSG101 tumor susceptibility 101
TSHR thyroid stimulating hormone receptor
TUBA1A tubulin, alpha 1a
TYMS thymidylate synthetase
UBE2A ubiquitin-conjugating enzyme E2A
UBE2N ubiquitin-conjugating enzyme E2N
UBQLN1 ubiquilin 1
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative)
UCP2 uncoupling protein 2 (mitochondrial, proton carrier)
UGDH UDP-glucose 6-dehydrogenase
UHRF1 ubiquitin-like with PHD and ring finger domains 1
USP25 ubiquitin specific peptidase 25
USP9X ubiquitin specific peptidase 9, X-linked
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
VCP valosin containing protein
VCPKMT valosin containing protein lysine (K) methyltransferase
WDR5 WD repeat domain 5
WHSC1 Wolf-Hirschhorn syndrome candidate 1
WNK1 WNK lysine deficient protein kinase 1
WRNIP1 Werner helicase interacting protein 1
YARS tyrosyl-tRNA synthetase
ZBTB16 zinc finger and BTB domain containing 16
ZBTB7A zinc finger and BTB domain containing 7A
ZIC3 Zic family member 3
ZNF76 zinc finger protein 76