malabsorption Gene Set

Dataset HPO Gene-Disease Associations
Category disease or phenotype associations
Type phenotype
Description Impaired ability to absorb one or more nutrients from the intestine. (Human Phenotype Ontology, HP_0002024)
External Link http://compbio.charite.de/hpoweb/showterm?id=HP:0002024
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Genes

191 genes associated with the malabsorption phenotype by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.

Symbol Name
ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4
ADA adenosine deaminase
AGA aspartylglucosaminidase
AIRE autoimmune regulator
AK2 adenylate kinase 2
AKR1D1 aldo-keto reductase family 1, member D1
AMACR alpha-methylacyl-CoA racemase
ANTXR2 anthrax toxin receptor 2
APC adenomatous polyposis coli
APOB apolipoprotein B
ARX aristaless related homeobox
ATP7A ATPase, Cu++ transporting, alpha polypeptide
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1
AVP arginine vasopressin
BAAT bile acid CoA:amino acid N-acyltransferase
BAZ1B bromodomain adjacent to zinc finger domain, 1B
BLNK B-cell linker
BMPR1A bone morphogenetic protein receptor, type IA
BTK Bruton agammaglobulinemia tyrosine kinase
C4A complement component 4A (Rodgers blood group)
CAV1 caveolin 1, caveolae protein, 22kDa
CCBE1 collagen and calcium binding EGF domains 1
CCR6 chemokine (C-C motif) receptor 6
CD19 CD19 molecule
CD79A CD79a molecule, immunoglobulin-associated alpha
CD79B CD79b molecule, immunoglobulin-associated beta
CD81 CD81 molecule
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHD7 chromodomain helicase DNA binding protein 7
CIITA class II, major histocompatibility complex, transactivator
CISD2 CDGSH iron sulfur domain 2
CLIP2 CAP-GLY domain containing linker protein 2
COX1
COX2
COX3
COX4I2 cytochrome c oxidase subunit IV isoform 2 (lung)
CR2 complement component (3d/Epstein Barr virus) receptor 2
CTC1 CTS telomere maintenance complex component 1
CTGF connective tissue growth factor
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTNS cystinosin, lysosomal cystine transporter
CYBA cytochrome b-245, alpha polypeptide
CYBB cytochrome b-245, beta polypeptide
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1
CYP7B1 cytochrome P450, family 7, subfamily B, polypeptide 1
DCLRE1C DNA cross-link repair 1C
DCTN4 dynactin 4 (p62)
DKC1 dyskeratosis congenita 1, dyskerin
DNASE1L3 deoxyribonuclease I-like 3
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta
ELN elastin
EPCAM epithelial cell adhesion molecule
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
F5 coagulation factor V (proaccelerin, labile factor)
FAT4 FAT atypical cadherin 4
GIF gastric intrinsic factor (vitamin B synthesis)
GLA galactosidase, alpha
GTF2I general transcription factor IIi
GTF2IRD1 GTF2I repeat domain containing 1
HBB hemoglobin, beta
HLA-B major histocompatibility complex, class I, B
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD)
HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
ICOS inducible T-cell co-stimulator
IDUA iduronidase, alpha-L-
IGHM immunoglobulin heavy constant mu
IGLL1 immunoglobulin lambda-like polypeptide 1
IL10 interleukin 10
IL12RB2 interleukin 12 receptor, beta 2
IL23R interleukin 23 receptor
IL2RG interleukin 2 receptor, gamma
IL7R interleukin 7 receptor
IRF5 interferon regulatory factor 5
JAK2 Janus kinase 2
KMT2D lysine (K)-specific methyltransferase 2D
KRAS Kirsten rat sarcoma viral oncogene homolog
LBR lamin B receptor
LCT lactase
LIG4 ligase IV, DNA, ATP-dependent
LIMK1 LIM domain kinase 1
LIPA lipase A, lysosomal acid, cholesterol esterase
LPIN2 lipin 2
LRBA LPS-responsive vesicle trafficking, beach and anchor containing
LRRC8A leucine rich repeat containing 8 family, member A
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2
MCM6 minichromosome maintenance complex component 6
MEFV Mediterranean fever
MLH1 mutL homolog 1
MLH3 mutL homolog 3
MPI mannose phosphate isomerase
MS4A1 membrane-spanning 4-domains, subfamily A, member 1
MSH2 mutS homolog 2
MSH6 mutS homolog 6
MT-ND4 NADH dehydrogenase, subunit 4 (complex I)
MT-ND5 NADH dehydrogenase, subunit 5 (complex I)
MT-ND6 NADH dehydrogenase, subunit 6 (complex I)
MT-TF tRNA
MT-TH tRNA
MT-TK tRNA
MT-TL1 tRNA
MT-TQ tRNA
MT-TS1 tRNA
MT-TS2 tRNA
MT-TW tRNA
MTTP microsomal triglyceride transfer protein
MYD88 myeloid differentiation primary response 88
MYO5B myosin VB
NBN nibrin
NCF1 neutrophil cytosolic factor 1
NCF2 neutrophil cytosolic factor 2
NCF4 neutrophil cytosolic factor 4, 40kDa
ND1
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
NHP2 NHP2 ribonucleoprotein
NOD2 nucleotide-binding oligomerization domain containing 2
NOP10 NOP10 ribonucleoprotein
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
OCRL oculocerebrorenal syndrome of Lowe
PCSK1 proprotein convertase subtilisin/kexin type 1
PEX1 peroxisomal biogenesis factor 1
PEX10 peroxisomal biogenesis factor 10
PEX11B peroxisomal biogenesis factor 11 beta
PEX12 peroxisomal biogenesis factor 12
PEX13 peroxisomal biogenesis factor 13
PEX14 peroxisomal biogenesis factor 14
PEX16 peroxisomal biogenesis factor 16
PEX19 peroxisomal biogenesis factor 19
PEX2 peroxisomal biogenesis factor 2
PEX26 peroxisomal biogenesis factor 26
PEX3 peroxisomal biogenesis factor 3
PEX5 peroxisomal biogenesis factor 5
PEX6 peroxisomal biogenesis factor 6
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PKP1 plakophilin 1
PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
PNLIP pancreatic lipase
POLG polymerase (DNA directed), gamma
PRKCD protein kinase C, delta
PRSS1 protease, serine, 1 (trypsin 1)
RAG1 recombination activating gene 1
RAG2 recombination activating gene 2
RECQL4 RecQ protein-like 4
RFC2 replication factor C (activator 1) 2, 40kDa
RFX5 regulatory factor X, 5 (influences HLA class II expression)
RFX6 regulatory factor X, 6
RFXANK regulatory factor X-associated ankyrin-containing protein
RFXAP regulatory factor X-associated protein
RMRP RNA component of mitochondrial RNA processing endoribonuclease
RTEL1 regulator of telomere elongation helicase 1
SAR1B secretion associated, Ras related GTPase 1B
SBDS Shwachman-Bodian-Diamond syndrome
SI sucrase-isomaltase (alpha-glucosidase)
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2
SLC39A4 solute carrier family 39 (zinc transporter), member 4
SLC46A1 solute carrier family 46 (folate transporter), member 1
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19
SLCO2A1 solute carrier organic anion transporter family, member 2A1
SPINK1 serine peptidase inhibitor, Kazal type 1
SPINK5 serine peptidase inhibitor, Kazal type 5
SRCAP Snf2-related CREBBP activator protein
STAT4 signal transducer and activator of transcription 4
STX1A syntaxin 1A (brain)
STX3 syntaxin 3
TBL2 transducin (beta)-like 2
TCF3 transcription factor 3
TERC telomerase RNA component
TERT telomerase reverse transcriptase
TGFB1 transforming growth factor, beta 1
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TINF2 TERF1 (TRF1)-interacting nuclear factor 2
TJP2 tight junction protein 2
TLR4 toll-like receptor 4
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C
TNFSF12 tumor necrosis factor (ligand) superfamily, member 12
TNXB tenascin XB
TRNE
TYMP thymidine phosphorylase
UBR1 ubiquitin protein ligase E3 component n-recognin 1
USB1 U6 snRNA biogenesis 1
VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae)
VPS33B vacuolar protein sorting 33 homolog B (yeast)
WFS1 Wolfram syndrome 1 (wolframin)
WRAP53 WD repeat containing, antisense to TP53
ZBTB24 zinc finger and BTB domain containing 24