malignancies Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

360 genes co-occuring with the biological term malignancies in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
AICDA activation-induced cytidine deaminase
AKR1C3 aldo-keto reductase family 1, member C3
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
AMER1 APC membrane recruitment protein 1
ANG angiogenin, ribonuclease, RNase A family, 5
ANGPT2 angiopoietin 2
ANKRD26 ankyrin repeat domain 26
ANPEP alanyl (membrane) aminopeptidase
ANXA2 annexin A2
APC adenomatous polyposis coli
ARNTL aryl hydrocarbon receptor nuclear translocator-like
ASXL1 additional sex combs like transcriptional regulator 1
ATM ATM serine/threonine kinase
B2M beta-2-microglobulin
BAG1 BCL2-associated athanogene
BCL10 B-cell CLL/lymphoma 10
BCL11B B-cell CLL/lymphoma 11B (zinc finger protein)
BCL3 B-cell CLL/lymphoma 3
BGLAP bone gamma-carboxyglutamate (gla) protein
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
BRINP1 bone morphogenetic protein/retinoic acid inducible neural-specific 1
BTK Bruton agammaglobulinemia tyrosine kinase
C1D C1D nuclear receptor corepressor
C8ORF4 chromosome 8 open reading frame 4
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase
CCDC26 CCDC26 long non-coding RNA
CCND1 cyclin D1
CD200 CD200 molecule
CD24 CD24 molecule
CD28 CD28 molecule
CD37 CD37 molecule
CD44 CD44 molecule (Indian blood group)
CD47 CD47 molecule
CD5 CD5 molecule
CD52 CD52 molecule
CD83 CD83 molecule
CDC42 cell division cycle 42
CDC7 cell division cycle 7
CDK6 cyclin-dependent kinase 6
CDK9 cyclin-dependent kinase 9
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDX2 caudal type homeobox 2
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CENPU centromere protein U
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CLDN4 claudin 4
CNTRL centriolin
CREB1 cAMP responsive element binding protein 1
CRLS1 cardiolipin synthase 1
CSF1 colony stimulating factor 1 (macrophage)
CT45A1 cancer/testis antigen family 45, member A1
CTAGE1 cutaneous T-cell lymphoma-associated antigen 1
CTGF connective tissue growth factor
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa
CXADR coxsackie virus and adenovirus receptor
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR4 chemokine (C-X-C motif) receptor 4
CYBB cytochrome b-245, beta polypeptide
CYLD cylindromatosis (turban tumor syndrome)
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYR61 cysteine-rich, angiogenic inducer, 61
DBF4 DBF4 zinc finger
DCAF6 DDB1 and CUL4 associated factor 6
DCK deoxycytidine kinase
DHDH dihydrodiol dehydrogenase (dimeric)
DHH desert hedgehog
DKK1 dickkopf WNT signaling pathway inhibitor 1
DKK3 dickkopf WNT signaling pathway inhibitor 3
DLEC1 deleted in lung and esophageal cancer 1
DNMT1 DNA (cytosine-5-)-methyltransferase 1
DPP4 dipeptidyl-peptidase 4
DPYD dihydropyrimidine dehydrogenase
EED embryonic ectoderm development
EGFR epidermal growth factor receptor
EIF4E eukaryotic translation initiation factor 4E
ENG endoglin
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2
EPB41 erythrocyte membrane protein band 4.1
EPCAM epithelial cell adhesion molecule
EPHA3 EPH receptor A3
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB3 erb-b2 receptor tyrosine kinase 3
ERCC2 excision repair cross-complementation group 2
ERH enhancer of rudimentary homolog (Drosophila)
ETV4 ets variant 4
EWSR1 EWS RNA-binding protein 1
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
FANCG Fanconi anemia, complementation group G
FASLG Fas ligand (TNF superfamily, member 6)
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23)
FGF2 fibroblast growth factor 2 (basic)
FGFR1 fibroblast growth factor receptor 1
FHIT fragile histidine triad
FLI1 Fli-1 proto-oncogene, ETS transcription factor
FLT3 fms-related tyrosine kinase 3
FMNL1 formin-like 1
FOSL2 FOS-like antigen 2
FOXA2 forkhead box A2
FOXO3 forkhead box O3
FSHR follicle stimulating hormone receptor
G6PD glucose-6-phosphate dehydrogenase
GATA2 GATA binding protein 2
GCSAM germinal center-associated, signaling and motility
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
GREM1 gremlin 1, DAN family BMP antagonist
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
HAMP hepcidin antimicrobial peptide
HDAC3 histone deacetylase 3
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HLA-DOA major histocompatibility complex, class II, DO alpha
HLA-E major histocompatibility complex, class I, E
HLA-G major histocompatibility complex, class I, G
HMGB1 high mobility group box 1
HOXA10 homeobox A10
HOXA11 homeobox A11
HPSE heparanase
HRAS Harvey rat sarcoma viral oncogene homolog
HRK harakiri, BCL2 interacting protein
HSPA4 heat shock 70kDa protein 4
IBSP integrin-binding sialoprotein
ICMT isoprenylcysteine carboxyl methyltransferase
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IER3 immediate early response 3
IFNA1 interferon, alpha 1
IFNL3 interferon, lambda 3
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF1R insulin-like growth factor 1 receptor
IGK immunoglobulin kappa locus
IHH indian hedgehog
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
IKZF2 IKAROS family zinc finger 2 (Helios)
IL10 interleukin 10
IL11 interleukin 11
IL16 interleukin 16
IL2 interleukin 2
IL23A interleukin 23, alpha subunit p19
IL2RA interleukin 2 receptor, alpha
IL4 interleukin 4
IL6 interleukin 6
IL7 interleukin 7
IL7R interleukin 7 receptor
ING1 inhibitor of growth family, member 1
IRF4 interferon regulatory factor 4
IRF5 interferon regulatory factor 5
IRF8 interferon regulatory factor 8
ITIH1 inter-alpha-trypsin inhibitor heavy chain 1
ITLN1 intelectin 1 (galactofuranose binding)
JAK2 Janus kinase 2
JAK3 Janus kinase 3
JUND jun D proto-oncogene
KDR kinase insert domain receptor
KIAA1524 KIAA1524
KIR3DL1 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1
KISS1 KiSS-1 metastasis-suppressor
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KLK10 kallikrein-related peptidase 10
KLK5 kallikrein-related peptidase 5
KLK7 kallikrein-related peptidase 7
KLRK1 killer cell lectin-like receptor subfamily K, member 1
KMT2A lysine (K)-specific methyltransferase 2A
KRAS Kirsten rat sarcoma viral oncogene homolog
L3MBTL1 l(3)mbt-like 1 (Drosophila)
LAPTM5 lysosomal protein transmembrane 5
LATS2 large tumor suppressor kinase 2
LCN2 lipocalin 2
MAGEA1 melanoma antigen family A1
MAGEA10 melanoma antigen family A10
MAML2 mastermind-like 2 (Drosophila)
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MAPK8 mitogen-activated protein kinase 8
MCL1 myeloid cell leukemia 1
MDK midkine (neurite growth-promoting factor 2)
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MECOM MDS1 and EVI1 complex locus
MICA MHC class I polypeptide-related sequence A
MICB MHC class I polypeptide-related sequence B
MIR1258 microRNA 1258
MIR125B1 microRNA 125b-1
MIR129-2 microRNA 129-2
MIR15A microRNA 15a
MIR16-1 microRNA 16-1
MIR182 microRNA 182
MIR203A microRNA 203a
MIR23A microRNA 23a
MIR29A microRNA 29a
MIR29B1 microRNA 29b-1
MIR663A microRNA 663a
MITF microphthalmia-associated transcription factor
MKI67 marker of proliferation Ki-67
MKNK1 MAP kinase interacting serine/threonine kinase 1
MLH1 mutL homolog 1
MMP2 matrix metallopeptidase 2
MMP9 matrix metallopeptidase 9
MNT MAX network transcriptional repressor
MPL MPL proto-oncogene, thrombopoietin receptor
MPO myeloperoxidase
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
MS4A1 membrane-spanning 4-domains, subfamily A, member 1
MSH2 mutS homolog 2
MSI2 musashi RNA-binding protein 2
MST1R macrophage stimulating 1 receptor
MTA1 metastasis associated 1
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MUC1 mucin 1, cell surface associated
MUC16 mucin 16, cell surface associated
MUTYH mutY homolog
MXD1 MAX dimerization protein 1
MXI1 MAX interactor 1, dimerization protein
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
NEFL neurofilament, light polypeptide
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NF1 neurofibromin 1
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NHEJ1 nonhomologous end-joining factor 1
NIT1 nitrilase 1
NIT2 nitrilase family, member 2
NOG noggin
NOTCH1 notch 1
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NQO1 NAD(P)H dehydrogenase, quinone 1
NRP1 neuropilin 1
NTN1 netrin 1
NTRK3 neurotrophic tyrosine kinase, receptor, type 3
NUP98 nucleoporin 98kDa
ONECUT1 one cut homeobox 1
OPCML opioid binding protein/cell adhesion molecule-like
P2RX5 purinergic receptor P2X, ligand gated ion channel, 5
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
PARP1 poly (ADP-ribose) polymerase 1
PAX4 paired box 4
PAX5 paired box 5
PBK PDZ binding kinase
PDE4B phosphodiesterase 4B, cAMP-specific
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PDRG1 p53 and DNA-damage regulated 1
PEAK1 pseudopodium-enriched atypical kinase 1
PECAM1 platelet/endothelial cell adhesion molecule 1
PGPEP1 pyroglutamyl-peptidase I
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PKN1 protein kinase N1
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid)
PLAUR plasminogen activator, urokinase receptor
POSTN periostin, osteoblast specific factor
PPP2R1A protein phosphatase 2, regulatory subunit A, alpha
PRDM1 PR domain containing 1, with ZNF domain
PRDM16 PR domain containing 16
PTEN phosphatase and tensin homolog
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTK2 protein tyrosine kinase 2
PTPN11 protein tyrosine phosphatase, non-receptor type 11
PTPN2 protein tyrosine phosphatase, non-receptor type 2
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
RAD51 RAD51 recombinase
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RALA v-ral simian leukemia viral oncogene homolog A (ras related)
RARA retinoic acid receptor, alpha
RASSF2 Ras association (RalGDS/AF-6) domain family member 2
RB1 retinoblastoma 1
RBBP8 retinoblastoma binding protein 8
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
RECK reversion-inducing-cysteine-rich protein with kazal motifs
REG4 regenerating islet-derived family, member 4
RET ret proto-oncogene
RFWD2 ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
RGL4 ral guanine nucleotide dissociation stimulator-like 4
RGR retinal G protein coupled receptor
RGS1 regulator of G-protein signaling 1
RGS2 regulator of G-protein signaling 2
RGS5 regulator of G-protein signaling 5
RHOBTB2 Rho-related BTB domain containing 2
ROR1 receptor tyrosine kinase-like orphan receptor 1
ROR2 receptor tyrosine kinase-like orphan receptor 2
RPL13 ribosomal protein L13
RUNX1 runt-related transcription factor 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
S100A9 S100 calcium binding protein A9
SCGB3A1 secretoglobin, family 3A, member 1
SDC1 syndecan 1
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SEPT4 septin 4
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SF3B1 splicing factor 3b, subunit 1, 155kDa
SH2B3 SH2B adaptor protein 3
SHH sonic hedgehog
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1
SLC16A7 solute carrier family 16 (monocarboxylate transporter), member 7
SOX11 SRY (sex determining region Y)-box 11
SPANXB1 SPANX family, member B1
SPHK2 sphingosine kinase 2
SPP1 secreted phosphoprotein 1
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT5B signal transducer and activator of transcription 5B
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced
STIL SCL/TAL1 interrupting locus
STK11 serine/threonine kinase 11
STK4 serine/threonine kinase 4
STMN1 stathmin 1
SUZ12 SUZ12 polycomb repressive complex 2 subunit
TEK TEK tyrosine kinase, endothelial
TERC telomerase RNA component
TERT telomerase reverse transcriptase
TET2 tet methylcytosine dioxygenase 2
TFRC transferrin receptor
TGFB1 transforming growth factor, beta 1
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP2 TIMP metallopeptidase inhibitor 2
TKTL1 transketolase-like 1
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
TLX1 T-cell leukemia homeobox 1
TLX3 T-cell leukemia homeobox 3
TNF tumor necrosis factor
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TP53 tumor protein p53
TP73 tumor protein p73
TRAF3 TNF receptor-associated factor 3
TYMS thymidylate synthetase
UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
USP9X ubiquitin specific peptidase 9, X-linked
VEGFA vascular endothelial growth factor A
VEGFC vascular endothelial growth factor C
VENTX VENT homeobox
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
WFDC2 WAP four-disulfide core domain 2
WNT1 wingless-type MMTV integration site family, member 1
WT1 Wilms tumor 1
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
YAP1 Yes-associated protein 1
YBX1 Y box binding protein 1
YY1 YY1 transcription factor
ZMYND11 zinc finger, MYND-type containing 11
ZNF268 zinc finger protein 268
ZNF521 zinc finger protein 521