manifestations Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

280 genes co-occuring with the biological term manifestations in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
AAAS achalasia, adrenocortical insufficiency, alacrimia
ABAT 4-aminobutyrate aminotransferase
ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6
ACE angiotensin I converting enzyme
ACP1 acid phosphatase 1, soluble
ADA adenosine deaminase
ADIPOQ adiponectin, C1Q and collagen domain containing
ADRB2 adrenoceptor beta 2, surface
AGER advanced glycosylation end product-specific receptor
AGXT alanine-glyoxylate aminotransferase
AKT1 v-akt murine thymoma viral oncogene homolog 1
AKT2 v-akt murine thymoma viral oncogene homolog 2
ALK anaplastic lymphoma receptor tyrosine kinase
ALMS1 Alstrom syndrome protein 1
ANKH ANKH inorganic pyrophosphate transport regulator
APC adenomatous polyposis coli
APOE apolipoprotein E
APOH apolipoprotein H (beta-2-glycoprotein I)
AR androgen receptor
ARX aristaless related homeobox
ATM ATM serine/threonine kinase
ATP7B ATPase, Cu++ transporting, beta polypeptide
BCL2L1 BCL2-like 1
BRCA1 breast cancer 1, early onset
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
CASR calcium-sensing receptor
CAT catalase
CCL2 chemokine (C-C motif) ligand 2
CCL3 chemokine (C-C motif) ligand 3
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD101 CD101 molecule
CD14 CD14 molecule
CD244 CD244 molecule, natural killer cell receptor 2B4
CD28 CD28 molecule
CD3G CD3g molecule, gamma (CD3-TCR complex)
CD40 CD40 molecule, TNF receptor superfamily member 5
CD40LG CD40 ligand
CD72 CD72 molecule
CDKN2A cyclin-dependent kinase inhibitor 2A
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHEK2 checkpoint kinase 2
CLDN19 claudin 19
COL11A1 collagen, type XI, alpha 1
COL17A1 collagen, type XVII, alpha 1
COL3A1 collagen, type III, alpha 1
COL4A5 collagen, type IV, alpha 5
COMT catechol-O-methyltransferase
CRP C-reactive protein, pentraxin-related
CSF1 colony stimulating factor 1 (macrophage)
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
DCAF17 DDB1 and CUL4 associated factor 17
DEL22Q11.2 Chromosome 22q11.2 deletion syndrome, distal
DICER1 dicer 1, ribonuclease type III
DKC1 dyskeratosis congenita 1, dyskerin
DOCK8 dedicator of cytokinesis 8
DPYSL5 dihydropyrimidinase-like 5
DSC2 desmocollin 2
EDN1 endothelin 1
EFTUD2 elongation factor Tu GTP binding domain containing 2
EGFR epidermal growth factor receptor
ENG endoglin
ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1
ERCC1 excision repair cross-complementation group 1
ERCC4 excision repair cross-complementation group 4
ESR1 estrogen receptor 1
F10 coagulation factor X
F2 coagulation factor II (thrombin)
F3 coagulation factor III (thromboplastin, tissue factor)
F5 coagulation factor V (proaccelerin, labile factor)
FABP4 fatty acid binding protein 4, adipocyte
FBN1 fibrillin 1
FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
FCN3 ficolin (collagen/fibrinogen domain containing) 3
FGB fibrinogen beta chain
FGF3 fibroblast growth factor 3
FGFR2 fibroblast growth factor receptor 2
FIG4 FIG4 phosphoinositide 5-phosphatase
FLNA filamin A, alpha
FLT1 fms-related tyrosine kinase 1
FN1 fibronectin 1
FOXL2 forkhead box L2
FOXP3 forkhead box P3
FRAXA fragile site, folic acid type, rare, fra(X)(q27.3) A (macroorchidism, mental retardation)
FREM1 FRAS1 related extracellular matrix 1
FYB FYN binding protein
GALNT3 polypeptide N-acetylgalactosaminyltransferase 3
GATA3 GATA binding protein 3
GBA glucosidase, beta, acid
GDAP1 ganglioside induced differentiation associated protein 1
GDF15 growth differentiation factor 15
GH1 growth hormone 1
GHRL ghrelin/obestatin prepropeptide
GIMAP5 GTPase, IMAP family member 5
GJB1 gap junction protein, beta 1, 32kDa
GLA galactosidase, alpha
GLUD1 glutamate dehydrogenase 1
GNAS GNAS complex locus
GPR143 G protein-coupled receptor 143
GSTM1 glutathione S-transferase mu 1
GSTT1 glutathione S-transferase theta 1
HAX1 HCLS1 associated protein X-1
HCCS holocytochrome c synthase
HFE hemochromatosis
HLA-B major histocompatibility complex, class I, B
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HLA-DRB4 major histocompatibility complex, class II, DR beta 4
HNF1A HNF1 homeobox A
HOXD13 homeobox D13
HRES1 HTLV-1 related endogenous sequence
HSD11B2 hydroxysteroid (11-beta) dehydrogenase 2
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
HTT huntingtin
IDS iduronate 2-sulfatase
IDUA iduronidase, alpha-L-
IFNA1 interferon, alpha 1
IFNG interferon, gamma
IFNL3 interferon, lambda 3
IGF1 insulin-like growth factor 1 (somatomedin C)
IL10 interleukin 10
IL15 interleukin 15
IL17A interleukin 17A
IL17F interleukin 17F
IL18 interleukin 18
IL1RN interleukin 1 receptor antagonist
IL23A interleukin 23, alpha subunit p19
IL31 interleukin 31
IL33 interleukin 33
IL6 interleukin 6
IRF1 interferon regulatory factor 1
ITGA6 integrin, alpha 6
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit)
ITGB4 integrin, beta 4
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1
KCNA2 potassium channel, voltage gated shaker related subfamily A, member 2
KCNA6 potassium channel, voltage gated shaker related subfamily A, member 6
KCNJ5 potassium channel, inwardly rectifying subfamily J, member 5
L2HGDH L-2-hydroxyglutarate dehydrogenase
LEP leptin
LGI1 leucine-rich, glioma inactivated 1
LIG4 ligase IV, DNA, ATP-dependent
LPIN1 lipin 1
LPIN2 lipin 2
LPIN3 lipin 3
LRPPRC leucine-rich pentatricopeptide repeat containing
LTA lymphotoxin alpha
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MAG myelin associated glycoprotein
MAPT microtubule-associated protein tau
MAVS mitochondrial antiviral signaling protein
MBL2 mannose-binding lectin (protein C) 2, soluble
MBP myelin basic protein
MECP2 methyl CpG binding protein 2
MEFV Mediterranean fever
MEN1 multiple endocrine neoplasia I
MICA MHC class I polypeptide-related sequence A
MLH1 mutL homolog 1
MSH2 mutS homolog 2
MT-TK tRNA
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MYBPC3 myosin binding protein C, cardiac
NAV3 neuron navigator 3
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NLRP1 NLR family, pyrin domain containing 1
NLRP12 NLR family, pyrin domain containing 12
NLRP3 NLR family, pyrin domain containing 3
NOS3 nitric oxide synthase 3 (endothelial cell)
NPSR1 neuropeptide S receptor 1
NR0B1 nuclear receptor subfamily 0, group B, member 1
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NR3C2 nuclear receptor subfamily 3, group C, member 2
OCA2 oculocutaneous albinism II
OCRL oculocerebrorenal syndrome of Lowe
OFD1 oral-facial-digital syndrome 1
OTC ornithine carbamoyltransferase
PAX6 paired box 6
PDCD1 programmed cell death 1
PGK1 phosphoglycerate kinase 1
PHOX2B paired-like homeobox 2b
PKP2 plakophilin 2
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
PLAU plasminogen activator, urokinase
PLEC plectin
PMM1 phosphomannomutase 1
POLG polymerase (DNA directed), gamma
PON1 paraoxonase 1
PPOX protoporphyrinogen oxidase
PRF1 perforin 1 (pore forming protein)
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PRODH proline dehydrogenase (oxidase) 1
PSORS4 psoriasis susceptibility 4
PTEN phosphatase and tensin homolog
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTH parathyroid hormone
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
RAB40AL RAB40A, member RAS oncogene family-like
RAD52 RAD52 homolog (S. cerevisiae)
RASA1 RAS p21 protein activator (GTPase activating protein) 1
RET ret proto-oncogene
RGS4 regulator of G-protein signaling 4
RNF123 ring finger protein 123
RUNX1 runt-related transcription factor 1
S100B S100 calcium binding protein B
SAA1 serum amyloid A1
SCN5A sodium channel, voltage gated, type V alpha subunit
SCN9A sodium channel, voltage gated, type IX alpha subunit
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SETBP1 SET binding protein 1
SHANK3 SH3 and multiple ankyrin repeat domains 3
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3
SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1
SLC39A4 solute carrier family 39 (zinc transporter), member 4
SLC45A2 solute carrier family 45, member 2
SLC46A1 solute carrier family 46 (folate transporter), member 1
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8
SLEB3 systemic lupus erythematosus susceptibility 3
SMAD4 SMAD family member 4
SNAP29 synaptosomal-associated protein, 29kDa
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOD1 superoxide dismutase 1, soluble
SOD2 superoxide dismutase 2, mitochondrial
SP3 Sp3 transcription factor
SPAST spastin
SPTAN1 spectrin, alpha, non-erythrocytic 1
SSB Sjogren syndrome antigen B (autoantigen La)
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT4 signal transducer and activator of transcription 4
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced
STS steroid sulfatase (microsomal), isozyme S
SUCLG1 succinate-CoA ligase, alpha subunit
TACR1 tachykinin receptor 1
TARDBP TAR DNA binding protein
TERT telomerase reverse transcriptase
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TFPI2 tissue factor pathway inhibitor 2
TGFB1 transforming growth factor, beta 1
TGFBI transforming growth factor, beta-induced, 68kDa
TLR1 toll-like receptor 1
TLR2 toll-like receptor 2
TLR6 toll-like receptor 6
TNF tumor necrosis factor
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFRSF8 tumor necrosis factor receptor superfamily, member 8
TNNT2 troponin T type 2 (cardiac)
TOR1A torsin family 1, member A (torsin A)
TP53 tumor protein p53
TPI1 triosephosphate isomerase 1
TRAF3IP2 TRAF3 interacting protein 2
TRIM63 tripartite motif containing 63, E3 ubiquitin protein ligase
TSC1 tuberous sclerosis 1
TSC2 tuberous sclerosis 2
TTF1 transcription termination factor, RNA polymerase I
TWIST1 twist family bHLH transcription factor 1
TYK2 tyrosine kinase 2
TYR tyrosinase
TYRP1 tyrosinase-related protein 1
UGT1A1 UDP glucuronosyltransferase 1 family, polypeptide A1
VCAM1 vascular cell adhesion molecule 1
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VWF von Willebrand factor
XCL1 chemokine (C motif) ligand 1
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
ZFP36 ZFP36 ring finger protein
ZMPSTE24 zinc metallopeptidase STE24
ZNF469 zinc finger protein 469