media Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description The physical state or matrix used to provide nutrients to the organism (e.g., liquid, agar, soil). (Experimental Factor Ontology, EFO_0000579)
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Genes

141 genes co-occuring with the biological term media in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6
ACTA2 actin, alpha 2, smooth muscle, aorta
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif, 2
ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif, 7
ADIPOQ adiponectin, C1Q and collagen domain containing
ADRB1 adrenoceptor beta 1
AGR2 anterior gradient 2
AKT1 v-akt murine thymoma viral oncogene homolog 1
APOA1 apolipoprotein A-I
APOA4 apolipoprotein A-IV
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
AREG amphiregulin
ARG1 arginase 1
ASNS asparagine synthetase (glutamine-hydrolyzing)
BCL6 B-cell CLL/lymphoma 6
BIRC5 baculoviral IAP repeat containing 5
CALCA calcitonin-related polypeptide alpha
CASP3 caspase 3, apoptosis-related cysteine peptidase
CCL2 chemokine (C-C motif) ligand 2
CCL5 chemokine (C-C motif) ligand 5
CD14 CD14 molecule
CD40 CD40 molecule, TNF receptor superfamily member 5
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CLDN1 claudin 1
CLDN3 claudin 3
CLDN5 claudin 5
CLEC7A C-type lectin domain family 7, member A
COL18A1 collagen, type XVIII, alpha 1
COMT catechol-O-methyltransferase
CPOX coproporphyrinogen oxidase
CSF1 colony stimulating factor 1 (macrophage)
CTBP1 C-terminal binding protein 1
CTGF connective tissue growth factor
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTSD cathepsin D
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
CXCL14 chemokine (C-X-C motif) ligand 14
CXCL3 chemokine (C-X-C motif) ligand 3
CXCL5 chemokine (C-X-C motif) ligand 5
CXCL8 chemokine (C-X-C motif) ligand 8
DUOX1 dual oxidase 1
ECE1 endothelin converting enzyme 1
ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1
EYA4 EYA transcriptional coactivator and phosphatase 4
F2RL1 coagulation factor II (thrombin) receptor-like 1
FBXO11 F-box protein 11
FGF2 fibroblast growth factor 2 (basic)
GLB1 galactosidase, beta 1
GPC1 glypican 1
GPC3 glypican 3
HOXA10 homeobox A10
HSPA4 heat shock 70kDa protein 4
HTRA1 HtrA serine peptidase 1
HTRA4 HtrA serine peptidase 4
ICAM1 intercellular adhesion molecule 1
IFNG interferon, gamma
IGF1 insulin-like growth factor 1 (somatomedin C)
IGFBP3 insulin-like growth factor binding protein 3
IGFBP7 insulin-like growth factor binding protein 7
IL10 interleukin 10
IL15 interleukin 15
IL18 interleukin 18
IL1B interleukin 1, beta
IL6 interleukin 6
IL6R interleukin 6 receptor
IL6ST interleukin 6 signal transducer
KRT8 keratin 8, type II
LDHB lactate dehydrogenase B
LTB4R leukotriene B4 receptor
MAPT microtubule-associated protein tau
MBL2 mannose-binding lectin (protein C) 2, soluble
MIR143 microRNA 143
MIR145 microRNA 145
MIR29A microRNA 29a
MMP1 matrix metallopeptidase 1
MMP2 matrix metallopeptidase 2
MMP3 matrix metallopeptidase 3
MMP7 matrix metallopeptidase 7
MMP9 matrix metallopeptidase 9
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MUC2 mucin 2, oligomeric mucus/gel-forming
MUC4 mucin 4, cell surface associated
MUC5AC mucin 5AC, oligomeric mucus/gel-forming
MUC5B mucin 5B, oligomeric mucus/gel-forming
MYH2 myosin, heavy chain 2, skeletal muscle, adult
NANOG Nanog homeobox
NES nestin
NEUROG1 neurogenin 1
NEUROG2 neurogenin 2
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive
NOS2 nitric oxide synthase 2, inducible
NOS3 nitric oxide synthase 3 (endothelial cell)
NOX4 NADPH oxidase 4
NT5E 5'-nucleotidase, ecto (CD73)
PCSK9 proprotein convertase subtilisin/kexin type 9
PDGFB platelet-derived growth factor beta polypeptide
PLAT plasminogen activator, tissue
PNLIPRP2 pancreatic lipase-related protein 2
PNPLA3 patatin-like phospholipase domain containing 3
PON1 paraoxonase 1
PTAFR platelet-activating factor receptor
PTCH1 patched 1
PTH parathyroid hormone
PTX3 pentraxin 3, long
QRFP pyroglutamylated RFamide peptide
RNASE3 ribonuclease, RNase A family, 3
SAA1 serum amyloid A1
SELP selectin P (granule membrane protein 140kDa, antigen CD62)
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
SERPINA12 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SFN stratifin
SFTPA1 surfactant protein A1
SLC20A2 solute carrier family 20 (phosphate transporter), member 2
SLC44A2 solute carrier family 44 (choline transporter), member 2
SMAD2 SMAD family member 2
SMAD4 SMAD family member 4
SMTN smoothelin
SOX2 SRY (sex determining region Y)-box 2
SPP1 secreted phosphoprotein 1
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TFRC transferrin receptor
TGFA transforming growth factor, alpha
TGFB1 transforming growth factor, beta 1
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TIMP1 TIMP metallopeptidase inhibitor 1
TLR2 toll-like receptor 2
TLR4 toll-like receptor 4
TLR5 toll-like receptor 5
TNF tumor necrosis factor
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TP53 tumor protein p53
TPSAB1 tryptase alpha/beta 1
UMOD uromodulin
VEGFA vascular endothelial growth factor A