mef cell Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Mouse embryonic fibroblast cell line. (BRENDA Tissue and Enzyme Source Ontology, BTO_0002572)
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Genes

208 proteins co-occuring with the tissue mef cell in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16 1.22737
ATG5 autophagy related 5 1.16914
VPS26B vacuolar protein sorting 26 homolog B (S. pombe) 1.15229
ANKRA2 ankyrin repeat, family A (RFXANK-like), 2 1.12438
VPS26A vacuolar protein sorting 26 homolog A (S. pombe) 1.07574
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 1.04488
JDP2 Jun dimerization protein 2 1.02294
EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 1.02031
EHD1 EH-domain containing 1 0.998037
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.993249
HIPK2 homeodomain interacting protein kinase 2 0.987597
TOP1MT topoisomerase (DNA) I, mitochondrial 0.968955
STAG1 stromal antigen 1 0.951254
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 0.921627
NEK7 NIMA-related kinase 7 0.908387
MSRB3 methionine sulfoxide reductase B3 0.905404
SPRY3 sprouty homolog 3 (Drosophila) 0.874439
OMA1 OMA1 zinc metallopeptidase 0.872327
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa 0.868951
DCP2 decapping mRNA 2 0.847904
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.842867
GCLC glutamate-cysteine ligase, catalytic subunit 0.831966
EAF2 ELL associated factor 2 0.830291
CREB3 cAMP responsive element binding protein 3 0.829453
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae) 0.828616
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.826523
STUB1 STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 0.824849
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.820248
ENOX2 ecto-NOX disulfide-thiol exchanger 2 0.818576
ARRB2 arrestin, beta 2 0.785635
SNX2 sorting nexin 2 0.782725
NCKIPSD NCK interacting protein with SH3 domain 0.778155
AHR aryl hydrocarbon receptor 0.774834
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) 0.774004
NEK6 NIMA-related kinase 6 0.771514
ATG7 autophagy related 7 0.751645
INPPL1 inositol polyphosphate phosphatase-like 1 0.750818
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A 0.73803
UIMC1 ubiquitin interaction motif containing 1 0.731854
LCOR ligand dependent nuclear receptor corepressor 0.729385
SNX1 sorting nexin 1 0.714189
LDLR low density lipoprotein receptor 0.71009
TUBA1B tubulin, alpha 1b 0.704355
PROM2 prominin 2 0.699035
MFAP5 microfibrillar associated protein 5 0.682695
TP53 tumor protein p53 0.677803
POLG2 polymerase (DNA directed), gamma 2, accessory subunit 0.677395
VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) 0.672506
PITPNA phosphatidylinositol transfer protein, alpha 0.661929
RPL11 ribosomal protein L11 0.66071
HUS1 HUS1 checkpoint homolog (S. pombe) 0.65056
HCLS1 hematopoietic cell-specific Lyn substrate 1 0.643669
CREB3L4 cAMP responsive element binding protein 3-like 4 0.631931
DPPA3 developmental pluripotency associated 3 0.629101
ATF3 activating transcription factor 3 0.62385
TGM2 transglutaminase 2 0.618603
ATF4 activating transcription factor 4 0.617796
SESN2 sestrin 2 0.617393
GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 0.61578
AKT2 v-akt murine thymoma viral oncogene homolog 2 0.614571
TUBA1C tubulin, alpha 1c 0.614167
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.610138
SETD7 SET domain containing (lysine methyltransferase) 7 0.605709
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1 0.605709
PDZD2 PDZ domain containing 2 0.592043
CRTC2 CREB regulated transcription coactivator 2 0.585224
PARK2 parkin RBR E3 ubiquitin protein ligase 0.577215
RAD17 RAD17 homolog (S. pombe) 0.564434
SIAH2 siah E3 ubiquitin protein ligase 2 0.563637
HDAC6 histone deacetylase 6 0.563238
AHNAK AHNAK nucleoprotein 0.563238
DDIT3 DNA-damage-inducible transcript 3 0.55249
SMAD7 SMAD family member 7 0.540585
PIWIL2 piwi-like RNA-mediated gene silencing 2 0.539793
FADD Fas (TNFRSF6)-associated via death domain 0.535438
REV1 REV1, polymerase (DNA directed) 0.531879
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.527534
SENP1 SUMO1/sentrin specific peptidase 1 0.520435
APOL1 apolipoprotein L, 1 0.518465
RRM2B ribonucleotide reductase M2 B (TP53 inducible) 0.518072
MFF mitochondrial fission factor 0.511778
ARHGAP32 Rho GTPase activating protein 32 0.507064
RIPK3 receptor-interacting serine-threonine kinase 3 0.503926
ARRB1 arrestin, beta 1 0.500398
ICMT isoprenylcysteine carboxyl methyltransferase 0.495701
POLB polymerase (DNA directed), beta 0.495309
WNT8B wingless-type MMTV integration site family, member 8B 0.488667
S1PR4 sphingosine-1-phosphate receptor 4 0.487886
PSEN1 presenilin 1 0.479312
STIM2 stromal interaction molecule 2 0.478923
APLP1 amyloid beta (A4) precursor-like protein 1 0.474258
AHRR aryl-hydrocarbon receptor repressor 0.470375
PARP2 poly (ADP-ribose) polymerase 2 0.464561
BECN1 beclin 1, autophagy related 0.464174
FPR1 formyl peptide receptor 1 0.462626
SIN3A SIN3 transcription regulator family member A 0.459532
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 0.459532
NRIP1 nuclear receptor interacting protein 1 0.459145
SMAD2 SMAD family member 2 0.456442
KLF4 Kruppel-like factor 4 (gut) 0.452198
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 0.450657
TRIM24 tripartite motif containing 24 0.445268
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.444884
IRS1 insulin receptor substrate 1 0.444499
CARM1 coactivator-associated arginine methyltransferase 1 0.444115
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 0.442578
DKK2 dickkopf WNT signaling pathway inhibitor 2 0.43989
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.436438
AKAP12 A kinase (PRKA) anchor protein 12 0.435289
HDAC9 histone deacetylase 9 0.431843
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 0.424199
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.423436
SIAH1 siah E3 ubiquitin protein ligase 1 0.42191
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.421529
HDAC2 histone deacetylase 2 0.420766
ATF1 activating transcription factor 1 0.419623
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) 0.412011
BHLHE41 basic helix-loop-helix family, member e41 0.405935
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.404418
H2AFX H2A histone family, member X 0.402144
SIRT1 sirtuin 1 0.402144
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.396844
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 0.396087
GADD45A growth arrest and DNA-damage-inducible, alpha 0.394953
MED12 mediator complex subunit 12 0.390421
OSMR oncostatin M receptor 0.388535
DLX3 distal-less homeobox 3 0.38665
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.386273
HSF2 heat shock transcription factor 2 0.386273
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.385143
HSF1 heat shock transcription factor 1 0.384013
PSIP1 PC4 and SFRS1 interacting protein 1 0.377245
CREBBP CREB binding protein 0.375368
MAPK8 mitogen-activated protein kinase 8 0.373493
DDIT4 DNA-damage-inducible transcript 4 0.371245
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.37087
MECP2 methyl CpG binding protein 2 0.369373
ATG12 autophagy related 12 0.366381
C10ORF2 chromosome 10 open reading frame 2 0.364513
PRC1 protein regulator of cytokinesis 1 0.358174
ZHX2 zinc fingers and homeoboxes 2 0.354455
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.34926
PDPK1 3-phosphoinositide dependent protein kinase 1 0.34926
ULK1 unc-51 like autophagy activating kinase 1 0.344818
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.344079
PRDX3 peroxiredoxin 3 0.342233
MAVS mitochondrial antiviral signaling protein 0.340388
H3F3A H3 histone, family 3A 0.33965
H3F3B H3 histone, family 3B (H3.3B) 0.33965
WIPF2 WAS/WASL interacting protein family, member 2 0.3356
ERCC5 excision repair cross-complementation group 5 0.333396
EPS15 epidermal growth factor receptor pathway substrate 15 0.333396
JAK1 Janus kinase 1 0.331194
PRMT1 protein arginine methyltransferase 1 0.329727
GBX2 gastrulation brain homeobox 2 0.323144
TBX2 T-box 2 0.32132
DNM1L dynamin 1-like 0.320591
SRF serum response factor (c-fos serum response element-binding transcription factor) 0.320227
HDAC5 histone deacetylase 5 0.317315
UCN3 urocortin 3 0.31332
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.308612
NFE2L2 nuclear factor, erythroid 2-like 2 0.306805
PARP1 poly (ADP-ribose) polymerase 1 0.306805
PLK4 polo-like kinase 4 0.306805
CREB1 cAMP responsive element binding protein 1 0.305722
BTG2 BTG family, member 2 0.300679
UGP2 UDP-glucose pyrophosphorylase 2 0.29996
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.298165
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.297806
CASP10 caspase 10, apoptosis-related cysteine peptidase 0.293151
E2F3 E2F transcription factor 3 0.290652
HDAC1 histone deacetylase 1 0.287447
GCLM glutamate-cysteine ligase, modifier subunit 0.286381
HTRA2 HtrA serine peptidase 2 0.283899
INPP5D inositol polyphosphate-5-phosphatase, 145kDa 0.280717
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1 0.275094
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 0.274045
TBX3 T-box 3 0.271256
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.270561
TRADD TNFRSF1A-associated via death domain 0.264696
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.261624
FEN1 flap structure-specific endonuclease 1 0.257237
RAP1A RAP1A, member of RAS oncogene family 0.252261
STAT1 signal transducer and activator of transcription 1, 91kDa 0.249653
MEN1 multiple endocrine neoplasia I 0.245491
MFN2 mitofusin 2 0.245175
RIPK4 receptor-interacting serine-threonine kinase 4 0.242363
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.241438
OPA1 optic atrophy 1 (autosomal dominant) 0.241132
PHGDH phosphoglycerate dehydrogenase 0.240826
S1PR2 sphingosine-1-phosphate receptor 2 0.236332
PRDX2 peroxiredoxin 2 0.23459
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta 0.232317
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.230656
HSF4 heat shock transcription factor 4 0.230382
EXT1 exostosin glycosyltransferase 1 0.227186
HDAC4 histone deacetylase 4 0.227186
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.226155
ROCK1P1 Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 0.225647
JAK2 Janus kinase 2 0.224645
MAP2K4 mitogen-activated protein kinase kinase 4 0.22415
KLF2 Kruppel-like factor 2 0.221291
IMMT inner membrane protein, mitochondrial 0.220378
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase 0.219264
CCND1 cyclin D1 0.21673
LRP6 low density lipoprotein receptor-related protein 6 0.216126
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.214388
HRAS Harvey rat sarcoma viral oncogene homolog 0.21365