myotome Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description The portion of an embryonic somite from which skeletal musculature is produced. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000742)
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Genes

272 proteins co-occuring with the tissue myotome in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
MYF5 myogenic factor 5 2.60823
MYOD1 myogenic differentiation 1 2.58057
PAX3 paired box 3 2.23735
MYOG myogenin (myogenic factor 4) 2.11926
MYF6 myogenic factor 6 (herculin) 2.05514
PAX7 paired box 7 1.87495
PAX1 paired box 1 1.79296
SHH sonic hedgehog 1.54439
FGF6 fibroblast growth factor 6 1.48317
VGLL2 vestigial-like family member 2 1.47381
MYRF myelin regulatory factor 1.41676
TMEM8C transmembrane protein 8C 1.35404
SIX4 SIX homeobox 4 1.31469
SCUBE2 signal peptide, CUB domain, EGF-like 2 1.28906
LRRN1 leucine rich repeat neuronal 1 1.26531
FGF4 fibroblast growth factor 4 1.21891
HES6 hes family bHLH transcription factor 6 1.19489
ACTC1 actin, alpha, cardiac muscle 1 1.12217
LMCD1 LIM and cysteine-rich domains 1 1.11022
SIX1 SIX homeobox 1 1.08811
MYH6 myosin, heavy chain 6, cardiac muscle, alpha 1.07485
NRK Nik related kinase 1.06735
VGLL3 vestigial-like family member 3 1.05281
MYL10 myosin, light chain 10, regulatory 1.04137
SEPN1 selenoprotein N, 1 1.03785
MYOM2 myomesin 2 1.03697
DMRT2 doublesex and mab-3 related transcription factor 2 1.01812
NOG noggin 1.0024
SHISA2 shisa family member 2 0.99586
MEF2A myocyte enhancer factor 2A 0.983688
MEF2D myocyte enhancer factor 2D 0.970253
STAC3 SH3 and cysteine rich domain 3 0.967657
POPDC3 popeye domain containing 3 0.962471
NFAM1 NFAT activating protein with ITAM motif 1 0.953409
WNT11 wingless-type MMTV integration site family, member 11 0.949962
FGFR4 fibroblast growth factor receptor 4 0.947809
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.938347
WNT1 wingless-type MMTV integration site family, member 1 0.92805
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.921627
CACNG4 calcium channel, voltage-dependent, gamma subunit 4 0.917779
SOX6 SRY (sex determining region Y)-box 6 0.908814
KLHL31 kelch-like family member 31 0.905831
FOXJ3 forkhead box J3 0.892223
WNT3A wingless-type MMTV integration site family, member 3A 0.885015
FLRT1 fibronectin leucine rich transmembrane protein 1 0.884167
CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle) 0.882474
TCF15 transcription factor 15 (basic helix-loop-helix) 0.882051
MYL1 myosin, light chain 1, alkali; skeletal, fast 0.880358
VGLL1 vestigial-like family member 1 0.873594
TTN titin 0.86642
PALMD palmdelphin 0.865155
FGF8 fibroblast growth factor 8 (androgen-induced) 0.864312
MYEF2 myelin expression factor 2 0.856732
ZIC1 Zic family member 1 0.850845
TWIST2 twist family bHLH transcription factor 2 0.849165
ATOH8 atonal homolog 8 (Drosophila) 0.838672
SIM1 single-minded family bHLH transcription factor 1 0.833642
MNX1 motor neuron and pancreas homeobox 1 0.833642
MEOX2 mesenchyme homeobox 2 0.833642
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.833223
POPDC2 popeye domain containing 2 0.831547
GLI2 GLI family zinc finger 2 0.822757
SCX scleraxis basic helix-loop-helix transcription factor 0.808968
MYO18A myosin XVIIIA 0.808551
MUSK muscle, skeletal, receptor tyrosine kinase 0.771514
ENO3 enolase 3 (beta, muscle) 0.760328
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.752057
COL19A1 collagen, type XIX, alpha 1 0.747515
GLIS1 GLIS family zinc finger 1 0.745864
TBX6 T-box 6 0.742976
ARL6 ADP-ribosylation factor-like 6 0.74009
PITX2 paired-like homeodomain 2 0.73803
MSGN1 mesogenin 1 0.728975
B3GAT1 beta-1,3-glucuronyltransferase 1 0.724453
ACHE acetylcholinesterase (Yt blood group) 0.723631
MSTN myostatin 0.719934
LBX1 ladybird homeobox 1 0.716651
SLC2A4RG SLC2A4 regulator 0.711729
FOXK2 forkhead box K2 0.710909
ZNF484 zinc finger protein 484 0.701899
MYBPC1 myosin binding protein C, slow type 0.699444
CRYAB crystallin, alpha B 0.698625
FRG1 FSHD region gene 1 0.696172
ORAOV1 oral cancer overexpressed 1 0.693311
FLRT2 fibronectin leucine rich transmembrane protein 2 0.688409
TNC tenascin C 0.682695
SCUBE3 signal peptide, CUB domain, EGF-like 3 0.677803
COL15A1 collagen, type XV, alpha 1 0.676172
TPM1 tropomyosin 1 (alpha) 0.66925
FGF1 fibroblast growth factor 1 (acidic) 0.668843
FN1 fibronectin 1 0.661523
RTN2 reticulon 2 0.660304
PVALB parvalbumin 0.657866
SRF serum response factor (c-fos serum response element-binding transcription factor) 0.655024
ZNF395 zinc finger protein 395 0.652589
TLE2 transducin-like enhancer of split 2 0.649749
MEF2C myocyte enhancer factor 2C 0.644884
SEMA6B sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 0.641238
BMP4 bone morphogenetic protein 4 0.636785
PTBP3 polypyrimidine tract binding protein 3 0.633549
CS citrate synthase 0.622235
PTCH1 patched 1 0.617393
MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow 0.614974
GLI1 GLI family zinc finger 1 0.612958
FOXK1 forkhead box K1 0.612152
TAGLN transgelin 0.609332
ARID5B AT rich interactive domain 5B (MRF1-like) 0.609332
IFNLR1 interferon, lambda receptor 1 0.601686
NEB nebulin 0.598871
ITM2A integral membrane protein 2A 0.597666
TM4SF5 transmembrane 4 L six family member 5 0.596862
LAMB2 laminin, beta 2 (laminin S) 0.593649
SIX5 SIX homeobox 5 0.588431
PRICKLE2 prickle homolog 2 (Drosophila) 0.582019
NFE2L3 nuclear factor, erythroid 2-like 3 0.580818
WNT6 wingless-type MMTV integration site family, member 6 0.578016
CDON cell adhesion associated, oncogene regulated 0.573217
TNNT2 troponin T type 2 (cardiac) 0.573217
ZIC4 Zic family member 4 0.572818
HRASLS5 HRAS-like suppressor family, member 5 0.571619
COL12A1 collagen, type XII, alpha 1 0.571219
RHOA ras homolog family member A 0.566428
IGFBP5 insulin-like growth factor binding protein 5 0.564833
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 0.56284
CDH4 cadherin 4, type 1, R-cadherin (retinal) 0.561245
SCUBE1 signal peptide, CUB domain, EGF-like 1 0.549312
MBNL2 muscleblind-like splicing regulator 2 0.544549
TBX22 T-box 22 0.540585
SOX5 SRY (sex determining region Y)-box 5 0.539396
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.539396
GPR37 G protein-coupled receptor 37 (endothelin receptor type B-like) 0.527534
ANO5 anoctamin 5 0.527139
MLC1 megalencephalic leukoencephalopathy with subcortical cysts 1 0.525166
FGF5 fibroblast growth factor 5 0.523982
BCHE butyrylcholinesterase 0.523588
PRICKLE1 prickle homolog 1 (Drosophila) 0.522011
FGF2 fibroblast growth factor 2 (basic) 0.520041
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 0.519253
FOXJ2 forkhead box J2 0.513743
MET MET proto-oncogene, receptor tyrosine kinase 0.511778
PTBP1 polypyrimidine tract binding protein 1 0.50275
LAMA1 laminin, alpha 1 0.500007
FXR1 fragile X mental retardation, autosomal homolog 1 0.499615
IGFBP7 insulin-like growth factor binding protein 7 0.498048
PAX9 paired box 9 0.496483
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.491791
TLE3 transducin-like enhancer of split 3 0.491791
TUBG1 tubulin, gamma 1 0.488667
FBXW2 F-box and WD repeat domain containing 2 0.483206
SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) 0.48087
FGFR1 fibroblast growth factor receptor 1 0.479702
GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 0.478534
GLRX2 glutaredoxin 2 0.472704
LEF1 lymphoid enhancer-binding factor 1 0.470763
HSPB2 heat shock 27kDa protein 2 0.470375
VCL vinculin 0.465723
FRAS1 Fraser extracellular matrix complex subunit 1 0.461465
GLB1 galactosidase, beta 1 0.460305
MESP2 mesoderm posterior basic helix-loop-helix transcription factor 2 0.459532
PLXNA3 plexin A3 0.4576
BMP1 bone morphogenetic protein 1 0.455284
CA3 carbonic anhydrase III 0.451813
ANGPTL7 angiopoietin-like 7 0.450657
PCNA proliferating cell nuclear antigen 0.449501
DMD dystrophin 0.442194
BVES blood vessel epicardial substance 0.439507
EN2 engrailed homeobox 2 0.437972
RFXANK regulatory factor X-associated ankyrin-containing protein 0.435672
COL5A2 collagen, type V, alpha 2 0.434523
FXR2 fragile X mental retardation, autosomal homolog 2 0.43414
HLTF helicase-like transcription factor 0.422292
VASP vasodilator-stimulated phosphoprotein 0.420766
GPC4 glypican 4 0.418861
CFL2 cofilin 2 (muscle) 0.41848
DLL1 delta-like 1 (Drosophila) 0.416195
MEP1B meprin A, beta 0.415814
NOTCH1 notch 1 0.413532
EFEMP2 EGF containing fibulin-like extracellular matrix protein 2 0.413151
TLE4 transducin-like enhancer of split 4 0.411631
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.41087
HLX H2.0-like homeobox 0.408972
NUMB numb homolog (Drosophila) 0.407073
GPR1 G protein-coupled receptor 1 0.405555
RXRG retinoid X receptor, gamma 0.405555
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.404039
FOXD2 forkhead box D2 0.40328
EYA2 EYA transcriptional coactivator and phosphatase 2 0.402523
TNK2 tyrosine kinase, non-receptor, 2 0.397979
AES amino-terminal enhancer of split 0.396844
FOXRED1 FAD-dependent oxidoreductase domain containing 1 0.394576
EN1 engrailed homeobox 1 0.388158
COLEC12 collectin sub-family member 12 0.382508
MCM4 minichromosome maintenance complex component 4 0.382508
MYL2 myosin, light chain 2, regulatory, cardiac, slow 0.382508
IGFBP6 insulin-like growth factor binding protein 6 0.381003
MIR27B microRNA 27b 0.376119
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) 0.371619
COL6A1 collagen, type VI, alpha 1 0.369373
SDC2 syndecan 2 0.366754
TGFB2 transforming growth factor, beta 2 0.359664
MB myoglobin 0.35743
ITGA7 integrin, alpha 7 0.356314
DNAH8 dynein, axonemal, heavy chain 8 0.35334
GLI3 GLI family zinc finger 3 0.344449
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.344079
HRC histidine rich calcium binding protein 0.34334
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.340757
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein 0.33965
ZIC3 Zic family member 3 0.331927
ENG endoglin 0.330827
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.328262
CTBP1 C-terminal binding protein 1 0.319498
EPHB3 EPH receptor B3 0.316224
CELF1 CUGBP, Elav-like family member 1 0.315861
FZD9 frizzled class receptor 9 0.309335
HOXC6 homeobox C6 0.309335
EXT2 exostosin glycosyltransferase 2 0.308612
PTCH2 patched 2 0.307167
EPHA4 EPH receptor A4 0.304279
PTBP2 polypyrimidine tract binding protein 2 0.297447
B3GAT2 beta-1,3-glucuronyltransferase 2 0.296372
TNMD tenomodulin 0.293866
MYBPC2 myosin binding protein C, fast type 0.292079
CTBP2 C-terminal binding protein 2 0.289939
FST follistatin 0.289582
SIX6 SIX homeobox 6 0.286026
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) 0.285671
TES testin LIM domain protein 0.284253
MESP1 mesoderm posterior basic helix-loop-helix transcription factor 1 0.283545
CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle) 0.283545
MCM3 minichromosome maintenance complex component 3 0.283545
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.282837
SULF1 sulfatase 1 0.282837
WNT5B wingless-type MMTV integration site family, member 5B 0.282483
LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 0.277197
SMO smoothened, frizzled class receptor 0.274394
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed 0.271952
HOXA13 homeobox A13 0.271604
ZIC2 Zic family member 2 0.270561
NCAM1 neural cell adhesion molecule 1 0.267791
MYH2 myosin, heavy chain 2, skeletal muscle, adult 0.265381
MYH1 myosin, heavy chain 1, skeletal muscle, adult 0.263669
OXCT1 3-oxoacid CoA transferase 1 0.263669
IPPK inositol 1,3,4,5,6-pentakisphosphate 2-kinase 0.261284
MSX1 msh homeobox 1 0.259254
FRY furry homolog (Drosophila) 0.258917
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.258243
TDG thymine-DNA glycosylase 0.25259
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.252261
ADSS adenylosuccinate synthase 0.249006
IGF2R insulin-like growth factor 2 receptor 0.243605
FHL1 four and a half LIM domains 1 0.243294
ADGRV1 adhesion G protein-coupled receptor V1 0.242983
BIN1 bridging integrator 1 0.239913
EVL Enah/Vasp-like 0.239913
KLHL2 kelch-like family member 2 0.232317
MBNL1 muscleblind-like splicing regulator 1 0.231482
TNNT1 troponin T type 1 (skeletal, slow) 0.230656
ACTG1 actin gamma 1 0.230656
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.226926
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) 0.22246
DLX3 distal-less homeobox 3 0.218613
HNF4A hepatocyte nuclear factor 4, alpha 0.218398
WNT3 wingless-type MMTV integration site family, member 3 0.217762
JAM3 junctional adhesion molecule 3 0.21673
NGF nerve growth factor (beta polypeptide) 0.215534
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.214954
NEO1 neogenin 1 0.214765
CAND2 cullin-associated and neddylation-dissociated 2 (putative) 0.214765
USH2A Usher syndrome 2A (autosomal recessive, mild) 0.214388
NTF3 neurotrophin 3 0.213112
ALYREF Aly/REF export factor 0.213112