nephrolithiasis Gene Set

Dataset DISEASES Text-mining Gene-Disease Association Evidence Scores
Category disease or phenotype associations
Type disease
Description Formation of stones in the KIDNEY. (Experimental Factor Ontology, EFO_0004253)
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Genes

189 genes co-occuring with the disease nephrolithiasis in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
CLCN5 chloride channel, voltage-sensitive 5 2.32207
PTH parathyroid hormone 2.11436
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1 1.94125
SLC7A9 solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 1.8409
SPP1 secreted phosphoprotein 1 1.82368
CHRM3 cholinergic receptor, muscarinic 3 1.75233
SLC26A6 solute carrier family 26 (anion exchanger), member 6 1.71545
APRT adenine phosphoribosyltransferase 1.71362
SLC26A1 solute carrier family 26 (anion exchanger), member 1 1.71271
AGXT alanine-glyoxylate aminotransferase 1.70816
GRHPR glyoxylate reductase/hydroxypyruvate reductase 1.66735
CASR calcium-sensing receptor 1.60502
SLC13A2 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 1.56622
CLDN14 claudin 14 1.56
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9 1.49613
FAM188B family with sequence similarity 188, member B 1.48077
SLC34A3 solute carrier family 34 (type II sodium/phosphate cotransporter), member 3 1.45089
SLC22A12 solute carrier family 22 (organic anion/urate transporter), member 12 1.43596
AMBP alpha-1-microglobulin/bikunin precursor 1.43244
CLDN16 claudin 16 1.43113
UMOD uromodulin 1.42367
HAO1 hydroxyacid oxidase (glycolate oxidase) 1 1.39214
PFN3 profilin 3 1.35856
HAO2 hydroxyacid oxidase 2 (long chain) 1.33196
MGAM maltase-glucoamylase 1.32367
SLC34A1 solute carrier family 34 (type II sodium/phosphate cotransporter), member 1 1.26734
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor 1.24776
SLC13A1 solute carrier family 13 (sodium/sulfate symporter), member 1 1.23126
RGS14 regulator of G-protein signaling 14 1.22605
CLCNKB chloride channel, voltage-sensitive Kb 1.18582
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 1.17593
OCRL oculocerebrorenal syndrome of Lowe 1.17335
HPRT1 hypoxanthine phosphoribosyltransferase 1 1.16179
EMP1 epithelial membrane protein 1 1.10889
RCCD1 RCC1 domain containing 1 1.09629
INMT indolethylamine N-methyltransferase 1.08957
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group) 1.08705
DGKH diacylglycerol kinase, eta 1.05261
SLC2A6 solute carrier family 2 (facilitated glucose transporter), member 6 1.04462
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1 1.04083
RIMBP3 RIMS binding protein 3 1.03662
GGCX gamma-glutamyl carboxylase 1.00246
SLC26A10 solute carrier family 26, member 10 1.00203
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.974642
ALPPL2 alkaline phosphatase, placental-like 2 0.974642
ALPP alkaline phosphatase, placental 0.974221
ALPL alkaline phosphatase, liver/bone/kidney 0.97338
CLCN3 chloride channel, voltage-sensitive 3 0.964148
ITIH4 inter-alpha-trypsin inhibitor heavy chain family, member 4 0.963728
SLC12A3 solute carrier family 12 (sodium/chloride transporter), member 3 0.954108
TRPV5 transient receptor potential cation channel, subfamily V, member 5 0.952856
XDH xanthine dehydrogenase 0.941196
ATP6V1B1 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 0.929587
LRP2 low density lipoprotein receptor-related protein 2 0.902389
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 0.891308
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 0.874509
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.862228
BSND barttin CLCNK-type chloride channel accessory beta subunit 0.837246
PREPL prolyl endopeptidase-like 0.835607
FAM20A family with sequence similarity 20, member A 0.827819
SLC9C1 solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1 0.825358
OSTM1 osteopetrosis associated transmembrane protein 1 0.811821
ALB albumin 0.762678
DNAH8 dynein, axonemal, heavy chain 8 0.761862
B2M beta-2-microglobulin 0.725716
MEN1 multiple endocrine neoplasia I 0.72127
CLCN4 chloride channel, voltage-sensitive 4 0.708767
HGD homogentisate 1,2-dioxygenase 0.694702
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta 0.676308
FGF23 fibroblast growth factor 23 0.675112
TALDO1 transaldolase 1 0.673518
CPN1 carboxypeptidase N, polypeptide 1 0.666755
GGT1 gamma-glutamyltransferase 1 0.666358
PCYT2 phosphate cytidylyltransferase 2, ethanolamine 0.666358
SLC9B2 solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 0.660008
OR2B2 olfactory receptor, family 2, subfamily B, member 2 0.65763
CAMKMT calmodulin-lysine N-methyltransferase 0.653671
KL klotho 0.65288
SLC7A10 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10 0.644586
ATP6V0A4 ATPase, H+ transporting, lysosomal V0 subunit a4 0.621008
CAT catalase 0.613965
MGP matrix Gla protein 0.612011
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.608104
LRRC16A leucine rich repeat containing 16A 0.6003
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 0.59913
MLEC malectin 0.597181
SOD2 superoxide dismutase 2, mitochondrial 0.592895
BGLAP bone gamma-carboxyglutamate (gla) protein 0.592506
SLC26A11 solute carrier family 26 (anion exchanger), member 11 0.588222
PCYT1B phosphate cytidylyltransferase 1, choline, beta 0.585108
PDZD3 PDZ domain containing 3 0.580439
F2 coagulation factor II (thrombin) 0.574217
FADS2 fatty acid desaturase 2 0.563335
TRPV6 transient receptor potential cation channel, subfamily V, member 6 0.559839
ZNF41 zinc finger protein 41 0.556344
CCL2 chemokine (C-C motif) ligand 2 0.519961
KIF3B kinesin family member 3B 0.511496
ZNF81 zinc finger protein 81 0.508041
SLC26A7 solute carrier family 26 (anion exchanger), member 7 0.507657
NOX4 NADPH oxidase 4 0.498467
AHSG alpha-2-HS-glycoprotein 0.496557
GPX1 glutathione peroxidase 1 0.483985
STATH statherin 0.483985
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B 0.481325
SLC12A7 solute carrier family 12 (potassium/chloride transporter), member 7 0.480566
CLCN7 chloride channel, voltage-sensitive 7 0.478289
AOX1 aldehyde oxidase 1 0.477909
SLC26A5 solute carrier family 26 (anion exchanger), member 5 0.476014
SLC17A3 solute carrier family 17 (organic anion transporter), member 3 0.467306
SLC22A18 solute carrier family 22, member 18 0.463149
CALCA calcitonin-related polypeptide alpha 0.456732
EDA ectodysplasin A 0.455978
MTNR1A melatonin receptor 1A 0.451831
TJP1 tight junction protein 1 0.450701
VKORC1 vitamin K epoxide reductase complex, subunit 1 0.449571
MAPRE1 microtubule-associated protein, RP/EB family, member 1 0.446558
SLC26A9 solute carrier family 26 (anion exchanger), member 9 0.442042
WWP2 WW domain containing E3 ubiquitin protein ligase 2 0.434148
LDHAL6A lactate dehydrogenase A-like 6A 0.431519
RNF2 ring finger protein 2 0.428891
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 0.424014
ORAI1 ORAI calcium release-activated calcium modulator 1 0.419892
SLC26A2 solute carrier family 26 (anion exchanger), member 2 0.418768
CD44 CD44 molecule (Indian blood group) 0.415398
CAPG capping protein (actin filament), gelsolin-like 0.40904
TBX3 T-box 3 0.400453
GPX5 glutathione peroxidase 5 0.397843
GPX4 glutathione peroxidase 4 0.394863
CHRM4 cholinergic receptor, muscarinic 4 0.38111
GFER growth factor, augmenter of liver regeneration 0.37629
ZNF365 zinc finger protein 365 0.371107
HLA-DMA major histocompatibility complex, class II, DM alpha 0.371107
GAST gastrin 0.370737
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.365193
CLCNKA chloride channel, voltage-sensitive Ka 0.365193
SDC2 syndecan 2 0.363347
OPLAH 5-oxoprolinase (ATP-hydrolysing) 0.357446
INS insulin 0.348614
CLCN1 chloride channel, voltage-sensitive 1 0.348246
UNG uracil-DNA glycosylase 0.337975
CHD1 chromodomain helicase DNA binding protein 1 0.337242
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.334681
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.334315
GPI glucose-6-phosphate isomerase 0.330295
CD4 CD4 molecule 0.326281
CLDN19 claudin 19 0.318635
POU2F1 POU class 2 homeobox 1 0.318635
FMN2 formin 2 0.308118
ACE angiotensin I converting enzyme 0.307757
RAB5A RAB5A, member RAS oncogene family 0.295492
ATP11A ATPase, class VI, type 11A 0.295492
LDHB lactate dehydrogenase B 0.294772
FAM131C family with sequence similarity 131, member C 0.294413
NUCLEOLIN nucleolin multifunctional protein 0.294053
ITPKC inositol-trisphosphate 3-kinase C 0.287593
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 0.286519
HPD 4-hydroxyphenylpyruvate dioxygenase 0.280439
TFF1 trefoil factor 1 0.269043
CAV1 caveolin 1, caveolae protein, 22kDa 0.266203
TPT1 tumor protein, translationally-controlled 1 0.261952
TFF3 trefoil factor 3 (intestinal) 0.261599
CRP C-reactive protein, pentraxin-related 0.23945
CA10 carbonic anhydrase X 0.235616
HAVCR1 hepatitis A virus cellular receptor 1 0.234573
LYZ lysozyme 0.234225
PDZK1 PDZ domain containing 1 0.233878
KAT5 K(lysine) acetyltransferase 5 0.231448
IMPDH2 IMP (inosine 5'-monophosphate) dehydrogenase 2 0.226262
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.222136
NAB2 NGFI-A binding protein 2 (EGR1 binding protein 2) 0.220766
LCN2 lipocalin 2 0.220766
TFE3 transcription factor binding to IGHM enhancer 3 0.201308
PHF12 PHD finger protein 12 0.201308
CLCN6 chloride channel, voltage-sensitive 6 0.200656
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) 0.191097
PLA2G1B phospholipase A2, group IB (pancreas) 0.180367
USP9X ubiquitin specific peptidase 9, X-linked 0.178403
FN1 fibronectin 1 0.178403
POMC proopiomelanocortin 0.177851
SLC26A4 solute carrier family 26 (anion exchanger), member 4 0.174881
ZNF436 zinc finger protein 436 0.172038
CBS cystathionine-beta-synthase 0.169091
VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) 0.167915
ANO5 anoctamin 5 0.167452
HAS3 hyaluronan synthase 3 0.167224
LDHAL6B lactate dehydrogenase A-like 6B 0.166768
LIG3 ligase III, DNA, ATP-dependent 0.161912
SUOX sulfite oxidase 0.159838
LARGE like-glycosyltransferase 0.157929