nod1 Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description nucleotide-binding oligomerization domain containing 1|This gene encodes a member of the NOD (nucleotide-binding oligomerization domain) family. This member is a cytosolic protein. It contains an N-terminal caspase recruitment domain (CARD), a centrally located nucleotide-binding domain (NBD), and 10 tandem leucine-rich repeats (LRRs) in its C terminus. The CARD is involved in apoptotic signaling, LRRs participate in protein-protein interactions, and mutations in the NBD may affect the process of oligomerization and subsequent function of the LRR domain. This protein is an intracellular pattern-recognition receptor (PRR) that initiates inflammation in response to a subset of bacteria through the detection of bacterial diaminopimelic acid. Multiple alternatively spliced transcript variants differring in the 5' UTR have been described, but the full-length nature of these variants has not been determined. [provided by RefSeq, Oct 2009] (NCBI Entrez Gene Database, 10392)
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Genes

25 genes co-occuring with the biological term nod1 in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ANKRD17 ankyrin repeat domain 17
CARD6 caspase recruitment domain family, member 6
CD34 CD34 molecule
CXCL8 chemokine (C-X-C motif) ligand 8
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DEFB104A defensin, beta 104A
DEFB4A defensin, beta 4A
IFIH1 interferon induced with helicase C domain 1
IFNG interferon, gamma
IL32 interleukin 32
IRF9 interferon regulatory factor 9
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
MYD88 myeloid differentiation primary response 88
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NLRP3 NLR family, pyrin domain containing 3
NOD1 nucleotide-binding oligomerization domain containing 1
NOD2 nucleotide-binding oligomerization domain containing 2
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7
RIPK2 receptor-interacting serine-threonine kinase 2
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
TLR2 toll-like receptor 2
TLR4 toll-like receptor 4
TLR8 toll-like receptor 8
UBC ubiquitin C
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase