nodes Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

228 genes co-occuring with the biological term nodes in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ACE angiotensin I converting enzyme
ACKR2 atypical chemokine receptor 2
AKT1 v-akt murine thymoma viral oncogene homolog 1
ANXA7 annexin A7
APC adenomatous polyposis coli
APOA1 apolipoprotein A-I
APOE apolipoprotein E
AQP1 aquaporin 1 (Colton blood group)
AQP3 aquaporin 3 (Gill blood group)
AQP8 aquaporin 8
BCL2 B-cell CLL/lymphoma 2
BIRC5 baculoviral IAP repeat containing 5
BMP4 bone morphogenetic protein 4
BPIFA1 BPI fold containing family A, member 1
BRAF B-Raf proto-oncogene, serine/threonine kinase
CALR calreticulin
CCDC88A coiled-coil domain containing 88A
CCL1 chemokine (C-C motif) ligand 1
CCL19 chemokine (C-C motif) ligand 19
CCL21 chemokine (C-C motif) ligand 21
CCNB1 cyclin B1
CCNG1 cyclin G1
CCNT1 cyclin T1
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CCR6 chemokine (C-C motif) receptor 6
CCR7 chemokine (C-C motif) receptor 7
CD1D CD1d molecule
CD200 CD200 molecule
CD207 CD207 molecule, langerin
CD38 CD38 molecule
CD4 CD4 molecule
CD40 CD40 molecule, TNF receptor superfamily member 5
CD44 CD44 molecule (Indian blood group)
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5
CHGA chromogranin A
CLDN1 claudin 1
CLEC4C C-type lectin domain family 4, member C
CMKLR1 chemerin chemokine-like receptor 1
CSPG4 chondroitin sulfate proteoglycan 4
CTGF connective tissue growth factor
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR3 chemokine (C-X-C motif) receptor 3
CXCR4 chemokine (C-X-C motif) receptor 4
DOCK8 dedicator of cytokinesis 8
DSG3 desmoglein 3
EBAG9 estrogen receptor binding site associated, antigen, 9
EGF epidermal growth factor
EGFR epidermal growth factor receptor
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific )
EPCAM epithelial cell adhesion molecule
EPHB4 EPH receptor B4
ERBB2 erb-b2 receptor tyrosine kinase 2
ERCC1 excision repair cross-complementation group 1
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23)
FCMR Fc fragment of IgM receptor
FCRL4 Fc receptor-like 4
FERMT3 fermitin family member 3
FGF13 fibroblast growth factor 13
FGF14 fibroblast growth factor 14
FLT1 fms-related tyrosine kinase 1
FLT4 fms-related tyrosine kinase 4
FN1 fibronectin 1
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FOXA1 forkhead box A1
FOXP3 forkhead box P3
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
FXYD5 FXYD domain containing ion transport regulator 5
GABARAPL1 GABA(A) receptor-associated protein like 1
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
GATA6 GATA binding protein 6
GJA1 gap junction protein, alpha 1, 43kDa
GJB1 gap junction protein, beta 1, 32kDa
GJB2 gap junction protein, beta 2, 26kDa
GJD3 gap junction protein, delta 3, 31.9kDa
GLDN gliomedin
GLI1 GLI family zinc finger 1
GSTM1 glutathione S-transferase mu 1
GSTP1 glutathione S-transferase pi 1
GSTT1 glutathione S-transferase theta 1
GUCY2C guanylate cyclase 2C
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HK2 hexokinase 2
HLA-G major histocompatibility complex, class I, G
HMGB1 high mobility group box 1
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
HOPX HOP homeobox
HOTAIR HOX transcript antisense RNA
HSD17B3 hydroxysteroid (17-beta) dehydrogenase 3
ICAM1 intercellular adhesion molecule 1
IDO1 indoleamine 2,3-dioxygenase 1
IFNA2 interferon, alpha 2
IGF1 insulin-like growth factor 1 (somatomedin C)
IL10 interleukin 10
IL17A interleukin 17A
IL2 interleukin 2
IL21R interleukin 21 receptor
IL22 interleukin 22
IL2RA interleukin 2 receptor, alpha
IL32 interleukin 32
IL6 interleukin 6
IL6R interleukin 6 receptor
IL7 interleukin 7
IRF3 interferon regulatory factor 3
IRF7 interferon regulatory factor 7
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3
KIRREL2 kin of IRRE like 2 (Drosophila)
KLF4 Kruppel-like factor 4 (gut)
KLK3 kallikrein-related peptidase 3
KLRB1 killer cell lectin-like receptor subfamily B, member 1
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
KRAS Kirsten rat sarcoma viral oncogene homolog
KRT17 keratin 17, type I
KRT19 keratin 19, type I
KRT20 keratin 20, type I
KRT5 keratin 5, type II
KRT7 keratin 7, type II
KRT75 keratin 75, type II
LAMP3 lysosomal-associated membrane protein 3
LGALS3 lectin, galactoside-binding, soluble, 3
LIF leukemia inhibitory factor
LOX lysyl oxidase
LOXL2 lysyl oxidase-like 2
LTA lymphotoxin alpha
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MBP myelin basic protein
MIA melanoma inhibitory activity
MIR206 microRNA 206
MIR214 microRNA 214
MKI67 marker of proliferation Ki-67
MMP1 matrix metallopeptidase 1
MMP2 matrix metallopeptidase 2
MMP21 matrix metallopeptidase 21
MMP3 matrix metallopeptidase 3
MMP7 matrix metallopeptidase 7
MMP9 matrix metallopeptidase 9
MTA1 metastasis associated 1
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MUC1 mucin 1, cell surface associated
MUC2 mucin 2, oligomeric mucus/gel-forming
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NFASC neurofascin
NOS2 nitric oxide synthase 2, inducible
NOTCH1 notch 1
NR3C2 nuclear receptor subfamily 3, group C, member 2
NUMBL numb homolog (Drosophila)-like
ORAI1 ORAI calcium release-activated calcium modulator 1
PCA3 prostate cancer associated 3 (non-protein coding)
PDCD1 programmed cell death 1
PDPN podoplanin
PF4V1 platelet factor 4 variant 1
PLAUR plasminogen activator, urokinase receptor
PRF1 perforin 1 (pore forming protein)
PRKCQ protein kinase C, theta
PSCA prostate stem cell antigen
PSME3 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)
PTEN phosphatase and tensin homolog
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTHLH parathyroid hormone-like hormone
PTP4A3 protein tyrosine phosphatase type IVA, member 3
PTPRG protein tyrosine phosphatase, receptor type, G
PTTG1 pituitary tumor-transforming 1
RASSF5 Ras association (RalGDS/AF-6) domain family member 5
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
S1PR1 sphingosine-1-phosphate receptor 1
SCGB1D4 secretoglobin, family 1D, member 4
SCGB2A1 secretoglobin, family 2A, member 1
SCGB2A2 secretoglobin, family 2A, member 2
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SCN9A sodium channel, voltage gated, type IX alpha subunit
SELL selectin L
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5
SHOX2 short stature homeobox 2
SKAP1 src kinase associated phosphoprotein 1
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
SLC39A6 solute carrier family 39 (zinc transporter), member 6
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3
SOX10 SRY (sex determining region Y)-box 10
SPATA2 spermatogenesis associated 2
SPINT1 serine peptidase inhibitor, Kunitz type 1
SPINT2 serine peptidase inhibitor, Kunitz type, 2
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
ST14 suppression of tumorigenicity 14 (colon carcinoma)
STAB2 stabilin 2
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
TBK1 TANK-binding kinase 1
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TG thyroglobulin
TGFA transforming growth factor, alpha
TGFB1 transforming growth factor, beta 1
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TIMP2 TIMP metallopeptidase inhibitor 2
TLR2 toll-like receptor 2
TNC tenascin C
TNF tumor necrosis factor
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNFRSF4 tumor necrosis factor receptor superfamily, member 4
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TNS4 tensin 4
TP53 tumor protein p53
TP63 tumor protein p63
TRA T cell receptor alpha locus
TYMS thymidylate synthetase
UBD ubiquitin D
UBE2I ubiquitin-conjugating enzyme E2I
USP19 ubiquitin specific peptidase 19
VCAM1 vascular cell adhesion molecule 1
VEGFA vascular endothelial growth factor A
VEGFC vascular endothelial growth factor C
WEE1 WEE1 G2 checkpoint kinase
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
ZEB1 zinc finger E-box binding homeobox 1
ZEB2 zinc finger E-box binding homeobox 2
ZNF384 zinc finger protein 384