nuclear cap binding complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A conserved heterodimeric protein complex that binds to the 5' terminal cap structure m7G(5')ppp(5')N of nascent eukaryotic RNA polymerase II transcripts such as pre-mRNA and U snRNA. The consists of proteins known as CBP20 and CBP80, binds to cap structures in the nucleus, and is involved in pre-mRNA splicing, 3'-end formation, and RNA nuclear export. (Gene Ontology, GO_0005846)
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45 proteins co-occuring with the nuclear cap binding complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
NCBP2 nuclear cap binding protein subunit 2, 20kDa 3.03584
EIF4E eukaryotic translation initiation factor 4E 1.76303
PHAX phosphorylated adaptor for RNA export 1.5943
CTIF CBP80/20-dependent translation initiation factor 1.58852
NCBP1 nuclear cap binding protein subunit 1, 80kDa 1.35211
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) 1.24236
C11ORF31 chromosome 11 open reading frame 31 1.18697
MBD5 methyl-CpG binding domain protein 5 1.12858
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 1.12858
HNRNPF heterogeneous nuclear ribonucleoprotein F 1.0238
MIF4GD MIF4G domain containing 0.873186
PARN poly(A)-specific ribonuclease 0.864447
SNRPA1 small nuclear ribonucleoprotein polypeptide A' 0.859392
SLC9A7 solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 0.783698
PCF11 PCF11 cleavage and polyadenylation factor subunit 0.765893
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 0.737813
XPO1 exportin 1 0.666394
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.659482
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) 0.65345
PCYT1A phosphate cytidylyltransferase 1, choline, alpha 0.611201
EIF4A3 eukaryotic translation initiation factor 4A3 0.599381
RNPS1 RNA binding protein S1, serine-rich domain 0.581758
DCPS decapping enzyme, scavenger 0.581758
NOP58 NOP58 ribonucleoprotein 0.578833
OCA2 oculocutaneous albinism II 0.54936
SLBP stem-loop binding protein 0.547297
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 0.541117
SLC9A6 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 0.536594
DCP1A decapping mRNA 1A 0.523067
DCP2 decapping mRNA 2 0.52225
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor 0.430647
NONO non-POU domain containing, octamer-binding 0.350622
SETD2 SET domain containing 2 0.341151
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.339261
PABPN1 poly(A) binding protein, nuclear 1 0.335864
TYR tyrosinase 0.29586
TYRP1 tyrosinase-related protein 1 0.277774
NME1-NME2 NME1-NME2 readthrough 0.271533
PABPC1 poly(A) binding protein, cytoplasmic 1 0.250389
MX1 MX dynamin-like GTPase 1 0.228464
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8) 0.211587
EIF3G eukaryotic translation initiation factor 3, subunit G 0.194371
MUT methylmalonyl CoA mutase 0.183025
AGO2 argonaute RISC catalytic component 2 0.173814
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.166167