nucleomorph Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A small, vestigial nucleus found in some plastids that derive from a eukaryotic endosymbiont. Observed in chlorarachniophytes and cryptomonads, which acquired their plastids from a green and red alga respectively. (Gene Ontology, GO_0033009)
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Genes

38 proteins co-occuring with the nucleomorph cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
EIF1 eukaryotic translation initiation factor 1 1.14597
SND1 staphylococcal nuclease and tudor domain containing 1 0.928892
UBE2D2 ubiquitin-conjugating enzyme E2D 2 0.906926
UBE2L3 ubiquitin-conjugating enzyme E2L 3 0.844696
UBE2A ubiquitin-conjugating enzyme E2A 0.760887
HSPA4 heat shock 70kDa protein 4 0.738263
UBE2I ubiquitin-conjugating enzyme E2I 0.647003
ADO 2-aminoethanethiol (cysteamine) dioxygenase 0.634586
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.614165
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.610778
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.572162
AK6 adenylate kinase 6 0.563847
SUMF2 sulfatase modifying factor 2 0.546885
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.538238
DERL1 derlin 1 0.530847
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.525522
F11R F11 receptor 0.520206
SYVN1 synovial apoptosis inhibitor 1, synoviolin 0.516124
RBX1 ring-box 1, E3 ubiquitin protein ligase 0.515308
UBE2N ubiquitin-conjugating enzyme E2N 0.51164
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.468401
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 0.456809
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.399751
EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 0.334733
HIST1H2AH histone cluster 1, H2ah 0.286983
H2AFJ H2A histone family, member J 0.286983
HIST1H2AM histone cluster 1, H2am 0.286983
HIST1H2AD histone cluster 1, H2ad 0.286983
HIST1H2AJ histone cluster 1, H2aj 0.286983
HIST1H2AG histone cluster 1, H2ag 0.285507
H2AFY2 H2A histone family, member Y2 0.284032
HIST1H2AE histone cluster 1, H2ae 0.283295
HIST1H2AB histone cluster 1, H2ab 0.283295
H2AFV H2A histone family, member V 0.282926
H2AFB1 H2A histone family, member B1 0.280349
H2AFB2 H2A histone family, member B2 0.277038
H2AFY H2A histone family, member Y 0.273734
EEF2 eukaryotic translation elongation factor 2 0.224913