osteosarcoma Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
Description A sarcoma originating in bone-forming cells, affecting the ends of long bones. It is the most common and most malignant of sarcomas of the bones, and occurs chiefly among 10- to 25-year-old youths. (From Stedman, 25th ed)|A malignant mesenchymal tumor arising from the bone.|A usually aggressive malignant bone-forming mesenchymal tumor, predominantly affecting adolescents and young adults. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus). Pain with or without a palpable mass is the most frequent clinical symptom. It may spread to other anatomic sites, particularly the lungs. (Experimental Factor Ontology, EFO_0000637)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:3347
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Genes

12 genes associated with the disease osteosarcoma in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
GRM4 glutamate receptor, metabotropic 4 1.43537
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 1.24194
ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 1.19386
FAM208B family with sequence similarity 208, member B 0.986376
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.889009
CREB5 cAMP responsive element binding protein 5 0.673456
ZC3H3 zinc finger CCCH-type containing 3 0.654134
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.648464
MTSS1 metastasis suppressor 1 0.59964
GPR149 G protein-coupled receptor 149 0.568979
TRAPPC9 trafficking protein particle complex 9 0.510252
RAD50 RAD50 homolog (S. cerevisiae) 0.502883