pbaf complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A SWI/SNF-type complex that contains the ATPase product of the mammalian BAF180 gene. (Gene Ontology, GO_0070604)
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Genes

52 proteins co-occuring with the pbaf complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
PBRM1 polybromo 1 2.16686
BANF1 barrier to autointegration factor 1 1.98835
BRD7 bromodomain containing 7 1.69277
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 1.62295
ACTL6A actin-like 6A 1.55367
ARID1B AT rich interactive domain 1B (SWI1-like) 1.49775
ARID1A AT rich interactive domain 1A (SWI-like) 1.48532
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 1.36197
PHF10 PHD finger protein 10 1.31519
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1 1.28836
THBS4 thrombospondin 4 1.26498
BCL7C B-cell CLL/lymphoma 7C 1.17978
DPF3 D4, zinc and double PHD fingers, family 3 1.1148
BRD9 bromodomain containing 9 1.09086
BCL7A B-cell CLL/lymphoma 7A 1.04281
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 1.0413
CHD7 chromodomain helicase DNA binding protein 7 0.94876
DPF1 D4, zinc and double PHD fingers family 1 0.914842
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 0.90089
PHF8 PHD finger protein 8 0.821746
DPF2 D4, zinc and double PHD fingers family 2 0.767715
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.760887
S100A13 S100 calcium binding protein A13 0.617982
MAML1 mastermind-like 1 (Drosophila) 0.585942
VRK1 vaccinia related kinase 1 0.580086
SSX1 synovial sarcoma, X breakpoint 1 0.579251
BRD3 bromodomain containing 3 0.551425
CRABP1 cellular retinoic acid binding protein 1 0.544823
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 0.535772
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.518981
SS18 synovial sarcoma translocation, chromosome 18 0.50635
SIK1 salt-inducible kinase 1 0.431435
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 0.423174
TFF1 trefoil factor 1 0.415337
RBP2 retinol binding protein 2, cellular 0.407529
CRABP2 cellular retinoic acid binding protein 2 0.353662
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.337373
HAND2 heart and neural crest derivatives expressed 2 0.324951
TWIST1 twist family bHLH transcription factor 1 0.321575
ASPH aspartate beta-hydroxylase 0.317456
RAD18 RAD18 E3 ubiquitin protein ligase 0.314465
KDM1A lysine (K)-specific demethylase 1A 0.267139
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 0.254017
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.248216
H3F3B H3 histone, family 3B (H3.3B) 0.244601
H3F3A H3 histone, family 3A 0.244601
BRCA1 breast cancer 1, early onset 0.232744
HIST2H2AC histone cluster 2, H2ac 0.188274
HIST2H2AA3 histone cluster 2, H2aa3 0.18796
HIST2H2AA4 histone cluster 2, H2aa4 0.18796
BMI1 BMI1 proto-oncogene, polycomb ring finger 0.170371
PRC1 protein regulator of cytokinesis 1 0.166405