peptidoglycan Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description A glycosaminoglycan formed by alternating residues of D-glucosamine and either muramic acid {2-amino-3-O-[(S)-1-carboxyethyl]-2-deoxy-D-glucose} or L-talosaminuronic acid (2-amino-2-deoxy-L-taluronic acid), which are usually N-acetylated or N-glycoloylated. The carboxyl group of the muramic acid is commonly substituted by a peptide containing residues of both L- and D-amino acids, whereas that of L-talosaminuronic acid is substituted by a peptide consisting of L-amino acids only. (Chemical Entities of Biological Interest Ontology, CHEBI_8005)
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Genes

31 genes co-occuring with the biological term peptidoglycan in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
APCS amyloid P component, serum
CD14 CD14 molecule
CD274 CD274 molecule
GCK glucokinase (hexokinase 4)
HEXB hexosaminidase B (beta polypeptide)
IFNG interferon, gamma
IL13 interleukin 13
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
MAPK14 mitogen-activated protein kinase 14
MAPK8 mitogen-activated protein kinase 8
MBL2 mannose-binding lectin (protein C) 2, soluble
MMP9 matrix metallopeptidase 9
MTOR mechanistic target of rapamycin (serine/threonine kinase)
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NLRC4 NLR family, CARD domain containing 4
NOD1 nucleotide-binding oligomerization domain containing 1
NOD2 nucleotide-binding oligomerization domain containing 2
PGLYRP1 peptidoglycan recognition protein 1
PGLYRP2 peptidoglycan recognition protein 2
PGLYRP3 peptidoglycan recognition protein 3
PGLYRP4 peptidoglycan recognition protein 4
PPARG peroxisome proliferator-activated receptor gamma
PTK2 protein tyrosine kinase 2
REG3A regenerating islet-derived 3 alpha
RIPK2 receptor-interacting serine-threonine kinase 2
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
THBS1 thrombospondin 1
TLR2 toll-like receptor 2
TLR6 toll-like receptor 6
TLR9 toll-like receptor 9
VEGFA vascular endothelial growth factor A