pha granule Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description An inclusion body located in the cytoplasm that consists of polyhydroxyalkanoate (PHA) molecules and associated proteins, surrounded by a phospholipid monolayer; the proteins include PHA synthase, PHA depolymerase and 3HB-oligomer hydroxylase, phasins (PhaPs), which are thought to be the major structural proteins of the membrane surrounding the inclusion, and the regulator of phasin expression PhaR. (Gene Ontology, GO_0070088)
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25 proteins co-occuring with the pha granule cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 1.71311
ACAA2 acetyl-CoA acyltransferase 2 1.67022
ACAA1 acetyl-CoA acyltransferase 1 1.44912
LBR lamin B receptor 1.2708
BATF2 basic leucine zipper transcription factor, ATF-like 2 1.05186
ACSL1 acyl-CoA synthetase long-chain family member 1 0.986342
ETFB electron-transfer-flavoprotein, beta polypeptide 0.927013
PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2 0.760433
BRD3 bromodomain containing 3 0.736464
CGA glycoprotein hormones, alpha polypeptide 0.637578
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 0.617557
SCNN1G sodium channel, non voltage gated 1 gamma subunit 0.615861
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 0.537005
HAO1 hydroxyacid oxidase (glycolate oxidase) 1 0.521023
HAO2 hydroxyacid oxidase 2 (long chain) 0.519389
PHB prohibitin 0.465198
GLB1 galactosidase, beta 1 0.442104
FBXO17 F-box protein 17 0.419644
PRDX6 peroxiredoxin 6 0.416511
SARS seryl-tRNA synthetase 0.408309
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.383895
MOG myelin oligodendrocyte glycoprotein 0.380045
GSTM1 glutathione S-transferase mu 1 0.358228
CD276 CD276 molecule 0.307377
SOX9 SRY (sex determining region Y)-box 9 0.171673