profiles Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

356 genes co-occuring with the biological term profiles in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
AANAT aralkylamine N-acetyltransferase
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ACTN4 actinin, alpha 4
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional)
ADIPOQ adiponectin, C1Q and collagen domain containing
ADRB2 adrenoceptor beta 2, surface
AGO1 argonaute RISC catalytic component 1
AGO2 argonaute RISC catalytic component 2
AIF1 allograft inflammatory factor 1
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
APOA1 apolipoprotein A-I
APOA5 apolipoprotein A-V
APOB apolipoprotein B
APOBEC3F apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOC3 apolipoprotein C-III
APOE apolipoprotein E
APOH apolipoprotein H (beta-2-glycoprotein I)
APP amyloid beta (A4) precursor protein
ARHGAP20 Rho GTPase activating protein 20
ATG5 autophagy related 5
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide
ATP1A3 ATPase, Na+/K+ transporting, alpha 3 polypeptide
ATP2A3 ATPase, Ca++ transporting, ubiquitous
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2
BCHE butyrylcholinesterase
BCL6 B-cell CLL/lymphoma 6
BDNF brain-derived neurotrophic factor
BHLHE41 basic helix-loop-helix family, member e41
BIRC5 baculoviral IAP repeat containing 5
BMI1 BMI1 proto-oncogene, polycomb ring finger
BMP6 bone morphogenetic protein 6
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
C3 complement component 3
C4A complement component 4A (Rodgers blood group)
C4B complement component 4B (Chido blood group)
C5AR1 complement component 5a receptor 1
CALCA calcitonin-related polypeptide alpha
CAV1 caveolin 1, caveolae protein, 22kDa
CCK cholecystokinin
CCL2 chemokine (C-C motif) ligand 2
CCNA2 cyclin A2
CCND1 cyclin D1
CCND2 cyclin D2
CCR2 chemokine (C-C motif) receptor 2
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD14 CD14 molecule
CD209 CD209 molecule
CD28 CD28 molecule
CD2AP CD2-associated protein
CD34 CD34 molecule
CD40 CD40 molecule, TNF receptor superfamily member 5
CD80 CD80 molecule
CD86 CD86 molecule
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon
CETP cholesteryl ester transfer protein, plasma
CFH complement factor H
CGB chorionic gonadotropin, beta polypeptide
CHD5 chromodomain helicase DNA binding protein 5
CLEC4M C-type lectin domain family 4, member M
COL16A1 collagen, type XVI, alpha 1
COMT catechol-O-methyltransferase
CRP C-reactive protein, pentraxin-related
CRTC1 CREB regulated transcription coactivator 1
CSF1 colony stimulating factor 1 (macrophage)
CSF2 colony stimulating factor 2 (granulocyte-macrophage)
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTNND1 catenin (cadherin-associated protein), delta 1
CTSB cathepsin B
CXADR coxsackie virus and adenovirus receptor
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR2 chemokine (C-X-C motif) receptor 2
CXCR4 chemokine (C-X-C motif) receptor 4
CYBA cytochrome b-245, alpha polypeptide
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6
DAOA D-amino acid oxidase activator
DAOA-AS1 DAOA antisense RNA 1
DBN1 drebrin 1
DCT dopachrome tautomerase
DEFB1 defensin, beta 1
DEFB103B defensin, beta 103B
DEFB4A defensin, beta 4A
DEFT1P2 defensin, theta 1 pseudogene 2
DICER1 dicer 1, ribonuclease type III
DKK1 dickkopf WNT signaling pathway inhibitor 1
DLK1 delta-like 1 homolog (Drosophila)
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DRD1 dopamine receptor D1
DRD5 dopamine receptor D5
DROSHA drosha, ribonuclease type III
E2F1 E2F transcription factor 1
EGFR epidermal growth factor receptor
EHMT1 euchromatic histone-lysine N-methyltransferase 1
EMP3 epithelial membrane protein 3
EP300 E1A binding protein p300
EPHB4 EPH receptor B4
EPHB6 EPH receptor B6
ERBB2 erb-b2 receptor tyrosine kinase 2
ERCC5 excision repair cross-complementation group 5
ERVW-1 endogenous retrovirus group W, member 1
ESR1 estrogen receptor 1
ESRRA estrogen-related receptor alpha
FA2H fatty acid 2-hydroxylase
FADS1 fatty acid desaturase 1
FADS2 fatty acid desaturase 2
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
FCGR1A Fc fragment of IgG, high affinity Ia, receptor (CD64)
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32)
FFAR4 free fatty acid receptor 4
FGF1 fibroblast growth factor 1 (acidic)
FGF21 fibroblast growth factor 21
FH fumarate hydratase
FLG filaggrin
FLNA filamin A, alpha
FN1 fibronectin 1
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FTO fat mass and obesity associated
G0S2 G0/G1 switch 2
GATA1 GATA binding protein 1 (globin transcription factor 1)
GFPT1 glutamine--fructose-6-phosphate transaminase 1
GH1 growth hormone 1
GHRL ghrelin/obestatin prepropeptide
GLI1 GLI family zinc finger 1
GLS glutaminase
GNLY granulysin
GPC3 glypican 3
GRN granulin
GSTM1 glutathione S-transferase mu 1
GSTP1 glutathione S-transferase pi 1
GSTT1 glutathione S-transferase theta 1
GUCA1A guanylate cyclase activator 1A (retina)
H19 H19, imprinted maternally expressed transcript (non-protein coding)
HARS histidyl-tRNA synthetase
HBB hemoglobin, beta
HCRT hypocretin (orexin) neuropeptide precursor
HDLBP high density lipoprotein binding protein
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HK3 hexokinase 3 (white cell)
HLA-B major histocompatibility complex, class I, B
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HMGA1 high mobility group AT-hook 1
HMGA2 high mobility group AT-hook 2
HNF1A HNF1 homeobox A
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
HTRA1 HtrA serine peptidase 1
ICAM1 intercellular adhesion molecule 1
ICOS inducible T-cell co-stimulator
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IFNG interferon, gamma
IGF1R insulin-like growth factor 1 receptor
IGF2 insulin-like growth factor 2
IGFBP3 insulin-like growth factor binding protein 3
IGHV4-34 immunoglobulin heavy variable 4-34
IKZF1 IKAROS family zinc finger 1 (Ikaros)
IKZF2 IKAROS family zinc finger 2 (Helios)
IL10 interleukin 10
IL13 interleukin 13
IL1B interleukin 1, beta
IL23R interleukin 23 receptor
IL34 interleukin 34
IL4 interleukin 4
IL6 interleukin 6
INHBB inhibin, beta B
INS insulin
IRF4 interferon regulatory factor 4
ITGA7 integrin, alpha 7
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1
KDM5B lysine (K)-specific demethylase 5B
KLK3 kallikrein-related peptidase 3
KLK4 kallikrein-related peptidase 4
KMT2A lysine (K)-specific methyltransferase 2A
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
KRT18 keratin 18, type I
KRT19 keratin 19, type I
KRT8 keratin 8, type II
LCAT lecithin-cholesterol acyltransferase
LDLR low density lipoprotein receptor
LEP leptin
LGALS1 lectin, galactoside-binding, soluble, 1
LGALS3 lectin, galactoside-binding, soluble, 3
LIN28B lin-28 homolog B (C. elegans)
LIPC lipase, hepatic
LOC643387 TAR DNA binding protein pseudogene
LOXL1 lysyl oxidase-like 1
LPL lipoprotein lipase
LRRK2 leucine-rich repeat kinase 2
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MAATS1 MYCBP-associated, testis expressed 1
MAML1 mastermind-like 1 (Drosophila)
MAML2 mastermind-like 2 (Drosophila)
MAOA monoamine oxidase A
MAP3K8 mitogen-activated protein kinase kinase kinase 8
MAPK1 mitogen-activated protein kinase 1
MBD1 methyl-CpG binding domain protein 1
MECP2 methyl CpG binding protein 2
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR132 microRNA 132
MIR145 microRNA 145
MIR146B microRNA 146b
MIR155 microRNA 155
MIR21 microRNA 21
MIR221 microRNA 221
MIR24-1 microRNA 24-1
MIR31 microRNA 31
MIR34A microRNA 34a
MIR95 microRNA 95
MIR96 microRNA 96
MLH1 mutL homolog 1
MME membrane metallo-endopeptidase
MMP1 matrix metallopeptidase 1
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP2 matrix metallopeptidase 2
MMP3 matrix metallopeptidase 3
MMP7 matrix metallopeptidase 7
MMP9 matrix metallopeptidase 9
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTTP microsomal triglyceride transfer protein
MUC1 mucin 1, cell surface associated
MUC2 mucin 2, oligomeric mucus/gel-forming
MUC5AC mucin 5AC, oligomeric mucus/gel-forming
MYB v-myb avian myeloblastosis viral oncogene homolog
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYCBP MYC binding protein
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
NAE1 NEDD8 activating enzyme E1 subunit 1
NAMPT nicotinamide phosphoribosyltransferase
NCAM1 neural cell adhesion molecule 1
NFE2L2 nuclear factor, erythroid 2-like 2
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
NLRP1 NLR family, pyrin domain containing 1
NLRP3 NLR family, pyrin domain containing 3
NPC1L1 NPC1-like 1
NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin)
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NPPB natriuretic peptide B
NPR3 natriuretic peptide receptor 3
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NUAK2 NUAK family, SNF1-like kinase, 2
OXTR oxytocin receptor
PCA3 prostate cancer associated 3 (non-protein coding)
PCSK2 proprotein convertase subtilisin/kexin type 2
PDCD5 programmed cell death 5
PDGFB platelet-derived growth factor beta polypeptide
PDPK1 3-phosphoinositide dependent protein kinase 1
PEBP1 phosphatidylethanolamine binding protein 1
PGF placental growth factor
PGR progesterone receptor
PLAG1 pleiomorphic adenoma gene 1
PODXL podocalyxin-like
PON1 paraoxonase 1
POU5F1 POU class 5 homeobox 1
PPARA peroxisome proliferator-activated receptor alpha
PPARD peroxisome proliferator-activated receptor delta
PPARG peroxisome proliferator-activated receptor gamma
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma
PRKCA protein kinase C, alpha
PRNP prion protein
PROM1 prominin 1
PSEN1 presenilin 1
PSMB8 proteasome (prosome, macropain) subunit, beta type, 8
PTCH1 patched 1
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
PYCARD PYD and CARD domain containing
RAB5A RAB5A, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RARB retinoic acid receptor, beta
RASSF1 Ras association (RalGDS/AF-6) domain family member 1
RB1 retinoblastoma 1
RBL2 retinoblastoma-like 2
RECK reversion-inducing-cysteine-rich protein with kazal motifs
RET ret proto-oncogene
RHD Rh blood group, D antigen
RPS27A ribosomal protein S27a
RUNX3 runt-related transcription factor 3
S100A9 S100 calcium binding protein A9
SATB1 SATB homeobox 1
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SFRP1 secreted frizzled-related protein 1
SHH sonic hedgehog
SKI SKI proto-oncogene
SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1
SLCO1A2 solute carrier organic anion transporter family, member 1A2
SMAD2 SMAD family member 2
SMAD4 SMAD family member 4
SMOC1 SPARC related modular calcium binding 1
SMYD2 SET and MYND domain containing 2
SNAP25 synaptosomal-associated protein, 25kDa
SOX2 SRY (sex determining region Y)-box 2
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
SREBF2 sterol regulatory element binding transcription factor 2
SSTR2 somatostatin receptor 2
SSTR5 somatostatin receptor 5
STAT1 signal transducer and activator of transcription 1, 91kDa
STIM1 stromal interaction molecule 1
SYNPO synaptopodin
TAC1 tachykinin, precursor 1
TACR1 tachykinin receptor 1
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TERT telomerase reverse transcriptase
TGFB1 transforming growth factor, beta 1
TGFB2 transforming growth factor, beta 2
TGFB3 transforming growth factor, beta 3
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
THRB thyroid hormone receptor, beta
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP2 TIMP metallopeptidase inhibitor 2
TLR2 toll-like receptor 2
TLR4 toll-like receptor 4
TLR7 toll-like receptor 7
TLR9 toll-like receptor 9
TMEM132D transmembrane protein 132D
TNF tumor necrosis factor
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TP53 tumor protein p53
TP63 tumor protein p63
TP73 tumor protein p73
TPH1 tryptophan hydroxylase 1
TSC1 tuberous sclerosis 1
TSC2 tuberous sclerosis 2
TTR transthyretin
UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
UCP1 uncoupling protein 1 (mitochondrial, proton carrier)
UMOD uromodulin
URGCP upregulator of cell proliferation
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
VKORC1 vitamin K epoxide reductase complex, subunit 1
VWF von Willebrand factor
XPA xeroderma pigmentosum, complementation group A
ZFHX3 zinc finger homeobox 3
ZFPM1 zinc finger protein, FOG family member 1