pulp Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description The soft, succulent part of a fruit usually composed of mesocarp. (BRENDA Tissue and Enzyme Source Ontology, BTO_0001142)
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Genes

90 genes co-occuring with the biological term pulp in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ADAM28 ADAM metallopeptidase domain 28
ALPL alkaline phosphatase, liver/bone/kidney
AOC3 amine oxidase, copper containing 3
ASPN asporin
ATF1 activating transcription factor 1
BCL2 B-cell CLL/lymphoma 2
BMP2 bone morphogenetic protein 2
CASP3 caspase 3, apoptosis-related cysteine peptidase
CCR7 chemokine (C-C motif) receptor 7
CD14 CD14 molecule
CDKN2A cyclin-dependent kinase inhibitor 2A
CHEK1 checkpoint kinase 1
CHEK2 checkpoint kinase 2
CNR1 cannabinoid receptor 1 (brain)
CREB1 cAMP responsive element binding protein 1
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL12 chemokine (C-X-C motif) ligand 12
CXCR3 chemokine (C-X-C motif) receptor 3
CXCR4 chemokine (C-X-C motif) receptor 4
DDIT3 DNA-damage-inducible transcript 3
DLL1 delta-like 1 (Drosophila)
DMP1 dentin matrix acidic phosphoprotein 1
DSPP dentin sialophosphoprotein
EFNB1 ephrin-B1
EFNB2 ephrin-B2
F2R coagulation factor II (thrombin) receptor
F2RL1 coagulation factor II (thrombin) receptor-like 1
FGF2 fibroblast growth factor 2 (basic)
FHOD1 formin homology 2 domain containing 1
GJA1 gap junction protein, alpha 1, 43kDa
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HMOX1 heme oxygenase 1
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HSPB1 heat shock 27kDa protein 1
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF1R insulin-like growth factor 1 receptor
IL1A interleukin 1, alpha
KITLG KIT ligand
KLF4 Kruppel-like factor 4 (gut)
LOXL2 lysyl oxidase-like 2
MAOB monoamine oxidase B
MAPK14 mitogen-activated protein kinase 14
MATN4 matrilin 4
MMP13 matrix metallopeptidase 13
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYC v-myc avian myelocytomatosis viral oncogene homolog
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NFE2L2 nuclear factor, erythroid 2-like 2
NOD1 nucleotide-binding oligomerization domain containing 1
NOD2 nucleotide-binding oligomerization domain containing 2
NOS2 nitric oxide synthase 2, inducible
NOS3 nitric oxide synthase 3 (endothelial cell)
NOTCH1 notch 1
NOTCH3 notch 3
NOV nephroblastoma overexpressed
OFD1 oral-facial-digital syndrome 1
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
PDLIM7 PDZ and LIM domain 7 (enigma)
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1
PLAT plasminogen activator, tissue
PLAU plasminogen activator, urokinase
POU5F1 POU class 5 homeobox 1
PTGFR prostaglandin F receptor (FP)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTHLH parathyroid hormone-like hormone
RGS5 regulator of G-protein signaling 5
RUNX2 runt-related transcription factor 2
SCN9A sodium channel, voltage gated, type IX alpha subunit
SIRPA signal-regulatory protein alpha
SIRT1 sirtuin 1
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
SMAD2 SMAD family member 2
SMAD3 SMAD family member 3
SOX2 SRY (sex determining region Y)-box 2
SP1 Sp1 transcription factor
SP7 Sp7 transcription factor
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
TGFB1 transforming growth factor, beta 1
TGFB2 transforming growth factor, beta 2
TGFBR1 transforming growth factor, beta receptor 1
TLR4 toll-like receptor 4
TMSB4X thymosin beta 4, X-linked
TNF tumor necrosis factor
TP53 tumor protein p53
TRPA1 transient receptor potential cation channel, subfamily A, member 1
TRPM8 transient receptor potential cation channel, subfamily M, member 8
TRPV1 transient receptor potential cation channel, subfamily V, member 1
VEGFA vascular endothelial growth factor A