radial spoke Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Protein complex that links the outer microtubule doublet of the ciliary or flagellum axoneme with the sheath that surrounds the central pair of microtubules. Composed of a stalk that attaches to each doublet microtubule and a globular structure (spoke head) that projects toward the central pair of microtubules. (Gene Ontology, GO_0001534)
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Genes

54 proteins co-occuring with the radial spoke cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
RSPH4A radial spoke head 4 homolog A (Chlamydomonas) 2.39433
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 2.17859
RSPH6A radial spoke head 6 homolog A (Chlamydomonas) 2.08599
RSPH9 radial spoke head 9 homolog (Chlamydomonas) 1.65272
RSPH1 radial spoke head 1 homolog (Chlamydomonas) 1.6342
PHF12 PHD finger protein 12 1.43895
DNAH9 dynein, axonemal, heavy chain 9 1.40746
HYDIN HYDIN, axonemal central pair apparatus protein 1.39406
RSPH3 radial spoke 3 homolog (Chlamydomonas) 1.34556
SPAG6 sperm associated antigen 6 1.32492
DNAJB13 DnaJ (Hsp40) homolog, subfamily B, member 13 1.2708
CCDC40 coiled-coil domain containing 40 1.24393
CCDC39 coiled-coil domain containing 39 1.18543
DRC7 dynein regulatory complex subunit 7 1.06751
DPY30 dpy-30 homolog (C. elegans) 1.06498
NAT14 N-acetyltransferase 14 (GCN5-related, putative) 0.960707
CCDC65 coiled-coil domain containing 65 0.939269
DYNLL1 dynein, light chain, LC8-type 1 0.881477
AKAP1 A kinase (PRKA) anchor protein 1 0.869966
HSPB11 heat shock protein family B (small), member 11 0.781412
DNAH11 dynein, axonemal, heavy chain 11 0.712351
PACRG PARK2 co-regulated 0.688576
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.666827
DNAH14 dynein, axonemal, heavy chain 14 0.657757
DNAH12 dynein, axonemal, heavy chain 12 0.657757
DNAH5 dynein, axonemal, heavy chain 5 0.628187
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.621379
PPP1R7 protein phosphatase 1, regulatory subunit 7 0.58678
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 0.584268
GBP1 guanylate binding protein 1, interferon-inducible 0.541117
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.534951
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.53454
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.53454
DBT dihydrolipoamide branched chain transacylase E2 0.448848
TUBA1A tubulin, alpha 1a 0.43696
PRKAR2B protein kinase, cAMP-dependent, regulatory, type II, beta 0.407919
PITX2 paired-like homeodomain 2 0.407919
POTEI POTE ankyrin domain family, member I 0.350243
ACT actin-like protein (ACT) gene 0.346829
POTEF POTE ankyrin domain family, member F 0.344178
ACTG2 actin, gamma 2, smooth muscle, enteric 0.304771
PRMT1 protein arginine methyltransferase 1 0.287352
ASPH aspartate beta-hydroxylase 0.283295
S100A6 S100 calcium binding protein A6 0.279612
ACTA2 actin, alpha 2, smooth muscle, aorta 0.276304
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 0.268603
AHSG alpha-2-HS-glycoprotein 0.267871
NME3 NME/NM23 nucleoside diphosphate kinase 3 0.247492
PPP2R4 protein phosphatase 2A activator, regulatory subunit 4 0.239197
VLDLR very low density lipoprotein receptor 0.23776
NME4 NME/NM23 nucleoside diphosphate kinase 4 0.234533
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.229176
TCF3 transcription factor 3 0.22173
HSPA4 heat shock 70kDa protein 4 0.175745