recombination Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description Production of new arrangements of DNA by various mechanisms such as assortment and segregation, CROSSING OVER; GENE CONVERSION; GENETIC TRANSFORMATION; GENETIC CONJUGATION; GENETIC TRANSDUCTION; or mixed infection of viruses. (Experimental Factor Ontology, EFO_0004293)
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Genes

282 genes co-occuring with the biological term recombination in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ACAT1 acetyl-CoA acetyltransferase 1
ACKR3 atypical chemokine receptor 3
ADA adenosine deaminase
ADRB2 adrenoceptor beta 2, surface
AGO2 argonaute RISC catalytic component 2
AICDA activation-induced cytidine deaminase
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALKBH1 alkB, alkylation repair homolog 1 (E. coli)
ALS2 amyotrophic lateral sclerosis 2 (juvenile)
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
ARID3A AT rich interactive domain 3A (BRIGHT-like)
ATM ATM serine/threonine kinase
ATRX alpha thalassemia/mental retardation syndrome X-linked
AURKA aurora kinase A
AVPR2 arginine vasopressin receptor 2
AZF1 azoospermia factor 1
BANP BTG3 associated nuclear protein
BAP1 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
BCCIP BRCA2 and CDKN1A interacting protein
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide
BCL2 B-cell CLL/lymphoma 2
BCL6 B-cell CLL/lymphoma 6
BLM Bloom syndrome, RecQ helicase-like
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
BRIP1 BRCA1 interacting protein C-terminal helicase 1
C1D C1D nuclear receptor corepressor
C1ORF27 chromosome 1 open reading frame 27
CBX1 chromobox homolog 1
CBX3 chromobox homolog 3
CBX5 chromobox homolog 5
CCAR2 cell cycle and apoptosis regulator 2
CD40 CD40 molecule, TNF receptor superfamily member 5
CDH4 cadherin 4, type 1, R-cadherin (retinal)
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon
CHEK1 checkpoint kinase 1
CHEK2 checkpoint kinase 2
COX4I2 cytochrome c oxidase subunit IV isoform 2 (lung)
CREBBP CREB binding protein
CRH corticotropin releasing hormone
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP21A1P cytochrome P450, family 21, subfamily A, polypeptide 1 pseudogene
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
DCLRE1B DNA cross-link repair 1B
DCLRE1C DNA cross-link repair 1C
DMC1 DNA meiotic recombinase 1
DMD dystrophin
DMPK dystrophia myotonica-protein kinase
DNTT DNA nucleotidylexotransferase
DRD4 dopamine receptor D4
DUX4L1 double homeobox 4 like 1
EDA ectodysplasin A
EFHD2 EF-hand domain family, member D2
ENAH enabled homolog (Drosophila)
EP300 E1A binding protein p300
EP400 E1A binding protein p400
ERBB2 erb-b2 receptor tyrosine kinase 2
ERCC1 excision repair cross-complementation group 1
ERCC2 excision repair cross-complementation group 2
ERCC4 excision repair cross-complementation group 4
ESR2 estrogen receptor 2 (ER beta)
ETV6 ets variant 6
EVC Ellis van Creveld protein
EVC2 Ellis van Creveld syndrome 2
EVL Enah/Vasp-like
EXO1 exonuclease 1
EXT1 exostosin glycosyltransferase 1
EXT2 exostosin glycosyltransferase 2
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
F11 coagulation factor XI
F8 coagulation factor VIII, procoagulant component
FANCA Fanconi anemia, complementation group A
FANCC Fanconi anemia, complementation group C
FANCD2 Fanconi anemia, complementation group D2
FANCG Fanconi anemia, complementation group G
FANCM Fanconi anemia, complementation group M
FBXO18 F-box protein, helicase, 18
FCGR3A Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
FEN1 flap structure-specific endonuclease 1
FGFR2 fibroblast growth factor receptor 2
FIGNL1 fidgetin-like 1
FOS FBJ murine osteosarcoma viral oncogene homolog
FOXM1 forkhead box M1
GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2
GBA glucosidase, beta, acid
GEN1 GEN1 Holliday junction 5' flap endonuclease
GLDC glycine dehydrogenase (decarboxylating)
GNAS GNAS complex locus
GPS2 G protein pathway suppressor 2
GRB7 growth factor receptor-bound protein 7
GSDMA gasdermin A
GSDMB gasdermin B
GTF2I general transcription factor IIi
H2AFX H2A histone family, member X
HAT1 histone acetyltransferase 1
HBA1 hemoglobin, alpha 1
HBA2 hemoglobin, alpha 2
HBB hemoglobin, beta
HDAC10 histone deacetylase 10
HDAC9 histone deacetylase 9
HFE hemochromatosis
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
HLA-B major histocompatibility complex, class I, B
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HOXD13 homeobox D13
HRES1 HTLV-1 related endogenous sequence
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1
IDS iduronate 2-sulfatase
IGF1R insulin-like growth factor 1 receptor
IGH immunoglobulin heavy locus
IGHA1 immunoglobulin heavy constant alpha 1
IGHM immunoglobulin heavy constant mu
IGK immunoglobulin kappa locus
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IKZF1 IKAROS family zinc finger 1 (Ikaros)
IL15 interleukin 15
IL21 interleukin 21
IL4 interleukin 4
IRS1 insulin receptor substrate 1
JAK2 Janus kinase 2
KCNK10 potassium channel, two pore domain subfamily K, member 10
KLHDC3 kelch domain containing 3
KMT2A lysine (K)-specific methyltransferase 2A
KRT10 keratin 10, type I
KRT23 keratin 23, type I
LAMP2 lysosomal-associated membrane protein 2
LDLR low density lipoprotein receptor
LIG4 ligase IV, DNA, ATP-dependent
LINC01587 long intergenic non-protein coding RNA 1587
LMO2 LIM domain only 2 (rhombotin-like 1)
MAPK14 mitogen-activated protein kinase 14
MCPH1 microcephalin 1
MDC1 mediator of DNA-damage checkpoint 1
MEIOB meiosis specific with OB domains
MIEN1 migration and invasion enhancer 1
MLH1 mutL homolog 1
MLH3 mutL homolog 3
MORF4L1 mortality factor 4 like 1
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
MSH2 mutS homolog 2
MSH4 mutS homolog 4
MSH5 mutS homolog 5
MSH6 mutS homolog 6
MUS81 MUS81 structure-specific endonuclease subunit
MYC v-myc avian myelocytomatosis viral oncogene homolog
NABP2 nucleic acid binding protein 2
NBN nibrin
NCAPG2 non-SMC condensin II complex, subunit G2
NF1 neurofibromin 1
NHEJ1 nonhomologous end-joining factor 1
NIPBL Nipped-B homolog (Drosophila)
NUCLEOLIN nucleolin multifunctional protein
NUP98 nucleoporin 98kDa
PALB2 partner and localizer of BRCA2
PARG poly (ADP-ribose) glycohydrolase
PARP1 poly (ADP-ribose) polymerase 1
PARPBP PARP1 binding protein
PAX5 paired box 5
PAXIP1 PAX interacting (with transcription-activation domain) protein 1
PCAT1 prostate cancer associated transcript 1 (non-protein coding)
PCNA proliferating cell nuclear antigen
PGAP3 post-GPI attachment to proteins 3
PLK1 polo-like kinase 1
PLP1 proteolipid protein 1
PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
PNKP polynucleotide kinase 3'-phosphatase
PNMT phenylethanolamine N-methyltransferase
POLH polymerase (DNA directed), eta
POLK polymerase (DNA directed) kappa
POLL polymerase (DNA directed), lambda
POLM polymerase (DNA directed), mu
PON1 paraoxonase 1
POT1 protection of telomeres 1
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B
PRDM9 PR domain containing 9
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PSMB2 proteasome (prosome, macropain) subunit, beta type, 2
PTPRC protein tyrosine phosphatase, receptor type, C
RAD50 RAD50 homolog (S. cerevisiae)
RAD51 RAD51 recombinase
RAD51B RAD51 paralog B
RAD51C RAD51 paralog C
RAD51D RAD51 paralog D
RAD52 RAD52 homolog (S. cerevisiae)
RAD54L RAD54-like (S. cerevisiae)
RAG1 recombination activating gene 1
RAG2 recombination activating gene 2
RAPSN receptor-associated protein of the synapse
RB1 retinoblastoma 1
RBBP8 retinoblastoma binding protein 8
RECQL RecQ helicase-like
RECQL4 RecQ protein-like 4
RECQL5 RecQ protein-like 5
RET ret proto-oncogene
RHOXF2 Rhox homeobox family, member 2
RMI1 RecQ mediated genome instability 1
RNF168 ring finger protein 168, E3 ubiquitin protein ligase
RNF20 ring finger protein 20, E3 ubiquitin protein ligase
RNF212 ring finger protein 212
RNF4 ring finger protein 4
RPA1 replication protein A1, 70kDa
RPA2 replication protein A2, 32kDa
RSF1 remodeling and spacing factor 1
RTN4 reticulon 4
RUNX1 runt-related transcription factor 1
RUVBL1 RuvB-like AAA ATPase 1
RUVBL2 RuvB-like AAA ATPase 2
SAT1 spermidine/spermine N1-acetyltransferase 1
SFPQ splicing factor proline/glutamine-rich
SFR1 SWI5-dependent recombination repair 1
SFTPB surfactant protein B
SIRT6 sirtuin 6
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
SLC6A1 solute carrier family 6 (neurotransmitter transporter), member 1
SLC7A7 solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
SLX4 SLX4 structure-specific endonuclease subunit
SLX4IP SLX4 interacting protein
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
SMC5 structural maintenance of chromosomes 5
SMC6 structural maintenance of chromosomes 6
SP100 SP100 nuclear antigen
SPG11 spastic paraplegia 11 (autosomal recessive)
SPIDR scaffolding protein involved in DNA repair
SSRP1 structure specific recognition protein 1
STARD3 StAR-related lipid transfer (START) domain containing 3
STIL SCL/TAL1 interrupting locus
STK32B serine/threonine kinase 32B
STS steroid sulfatase (microsomal), isozyme S
SUMO1 small ubiquitin-like modifier 1
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae)
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae)
SUZ12 SUZ12 polycomb repressive complex 2 subunit
SWAP70 SWAP switching B-cell complex 70kDa subunit
SWI5 SWI5 recombination repair homolog (yeast)
SWSAP1 SWIM-type zinc finger 7 associated protein 1
SYCP3 synaptonemal complex protein 3
TAL1 T-cell acute lymphocytic leukemia 1
TCAP titin-cap
TERF2 telomeric repeat binding factor 2
TERT telomerase reverse transcriptase
TLR4 toll-like receptor 4
TLX1 T-cell leukemia homeobox 1
TNF tumor necrosis factor
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B
TNFSF13 tumor necrosis factor (ligand) superfamily, member 13
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TNXA tenascin XA (pseudogene)
TNXB tenascin XB
TOP1 topoisomerase (DNA) I
TOP2A topoisomerase (DNA) II alpha 170kDa
TOP3A topoisomerase (DNA) III alpha
TOPBP1 topoisomerase (DNA) II binding protein 1
TP53 tumor protein p53
TP53BP1 tumor protein p53 binding protein 1
TRA T cell receptor alpha locus
TRB T cell receptor beta locus
TRD T cell receptor delta locus
TSN translin
UBE2N ubiquitin-conjugating enzyme E2N
UFD1L ubiquitin fusion degradation 1 like (yeast)
USH1C Usher syndrome 1C (autosomal recessive, severe)
USH2A Usher syndrome 2A (autosomal recessive, mild)
VASP vasodilator-stimulated phosphoprotein
VPREB1 pre-B lymphocyte 1
WAPAL wings apart-like homolog (Drosophila)
WDR11 WD repeat domain 11
WHSC1 Wolf-Hirschhorn syndrome candidate 1
WRN Werner syndrome, RecQ helicase-like
XPO1 exportin 1
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3
XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
YY1 YY1 transcription factor
ZNF365 zinc finger protein 365
ZNF827 zinc finger protein 827