regeneration Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
Description The regrowth of a lost or destroyed body part, such as an organ or tissue. (Gene Ontology, GO_0031099)
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Genes

226 genes co-occuring with the biological term regeneration in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ACKR3 atypical chemokine receptor 3
ADAM10 ADAM metallopeptidase domain 10
ADAM17 ADAM metallopeptidase domain 17
ADM adrenomedullin
AFP alpha-fetoprotein
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALDH3A1 aldehyde dehydrogenase 3 family, member A1
APAF1 apoptotic peptidase activating factor 1
APOA1 apolipoprotein A-I
APOA5 apolipoprotein A-V
APOE apolipoprotein E
AQP5 aquaporin 5
AREG amphiregulin
ATF3 activating transcription factor 3
ATOH1 atonal homolog 1 (Drosophila)
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2
AURKA aurora kinase A
BBC3 BCL2 binding component 3
BDNF brain-derived neurotrophic factor
BIRC5 baculoviral IAP repeat containing 5
BMI1 BMI1 proto-oncogene, polycomb ring finger
BMP2 bone morphogenetic protein 2
BMP4 bone morphogenetic protein 4
BMP7 bone morphogenetic protein 7
BRAF B-Raf proto-oncogene, serine/threonine kinase
CALCA calcitonin-related polypeptide alpha
CAMP cathelicidin antimicrobial peptide
CASP2 caspase 2, apoptosis-related cysteine peptidase
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASP6 caspase 6, apoptosis-related cysteine peptidase
CAV1 caveolin 1, caveolae protein, 22kDa
CCND1 cyclin D1
CCR7 chemokine (C-C motif) receptor 7
CD34 CD34 molecule
CD44 CD44 molecule (Indian blood group)
CD9 CD9 molecule
CDH15 cadherin 15, type 1, M-cadherin (myotubule)
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CLU clusterin
CNTF ciliary neurotrophic factor
COL2A1 collagen, type II, alpha 1
CRH corticotropin releasing hormone
CRHR2 corticotropin releasing hormone receptor 2
CRP C-reactive protein, pentraxin-related
CSF3 colony stimulating factor 3 (granulocyte)
CSPG4 chondroitin sulfate proteoglycan 4
CTGF connective tissue growth factor
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CXADR coxsackie virus and adenovirus receptor
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR3 chemokine (C-X-C motif) receptor 3
CXCR4 chemokine (C-X-C motif) receptor 4
CYR61 cysteine-rich, angiogenic inducer, 61
DMBT1 deleted in malignant brain tumors 1
DOCK3 dedicator of cytokinesis 3
DPP4 dipeptidyl-peptidase 4
DTNA dystrobrevin, alpha
DYSF dysferlin
EGFR epidermal growth factor receptor
EGLN1 egl-9 family hypoxia-inducible factor 1
ELF4 E74-like factor 4 (ets domain transcription factor)
EPO erythropoietin
F13A1 coagulation factor XIII, A1 polypeptide
F2 coagulation factor II (thrombin)
FCGBP Fc fragment of IgG binding protein
FERMT2 fermitin family member 2
FGF2 fibroblast growth factor 2 (basic)
FGF9 fibroblast growth factor 9
FIGF c-fos induced growth factor (vascular endothelial growth factor D)
FLT3LG fms-related tyrosine kinase 3 ligand
FMOD fibromodulin
G6PD glucose-6-phosphate dehydrogenase
GAP43 growth associated protein 43
GATA6 GATA binding protein 6
GCG glucagon
GDNF glial cell derived neurotrophic factor
GFER growth factor, augmenter of liver regeneration
GHRL ghrelin/obestatin prepropeptide
GJA1 gap junction protein, alpha 1, 43kDa
GLUL glutamate-ammonia ligase
GNAS GNAS complex locus
GPNMB glycoprotein (transmembrane) nmb
GSTO2 glutathione S-transferase omega 2
GSTP1 glutathione S-transferase pi 1
HBP1 HMG-box transcription factor 1
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HMGB1 high mobility group box 1
HOXA13 homeobox A13
HSD11B1 hydroxysteroid (11-beta) dehydrogenase 1
HSPG2 heparan sulfate proteoglycan 2
IFNG interferon, gamma
IFRD1 interferon-related developmental regulator 1
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF1R insulin-like growth factor 1 receptor
IGF2 insulin-like growth factor 2
IGFBP5 insulin-like growth factor binding protein 5
IHH indian hedgehog
IL1B interleukin 1, beta
IL1RN interleukin 1 receptor antagonist
IL22 interleukin 22
IL6 interleukin 6
IL7 interleukin 7
ITGA6 integrin, alpha 6
ITGB4 integrin, beta 4
JADE1 jade family PHD finger 1
JUN jun proto-oncogene
KAT7 K(lysine) acetyltransferase 7
KAZALD1 Kazal-type serine peptidase inhibitor domain 1
KDM6B lysine (K)-specific demethylase 6B
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
LAMA1 laminin, alpha 1
LAMA3 laminin, alpha 3
LECT2 leukocyte cell-derived chemotaxin 2
LEP leptin
LRP1B low density lipoprotein receptor-related protein 1B
LTB lymphotoxin beta (TNF superfamily, member 3)
LTBR lymphotoxin beta receptor (TNFR superfamily, member 3)
LUM lumican
MAP2K1 mitogen-activated protein kinase kinase 1
MAP2K2 mitogen-activated protein kinase kinase 2
MAPK1 mitogen-activated protein kinase 1
MAPK14 mitogen-activated protein kinase 14
MAPK3 mitogen-activated protein kinase 3
MCAM melanoma cell adhesion molecule
MET MET proto-oncogene, receptor tyrosine kinase
MMP9 matrix metallopeptidase 9
MSTN myostatin
MT-TL1 tRNA
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYOD1 myogenic differentiation 1
MYT1 myelin transcription factor 1
NAMPT nicotinamide phosphoribosyltransferase
NANOG Nanog homeobox
NCK1 NCK adaptor protein 1
NDE1 nudE neurodevelopment protein 1
NEFH neurofilament, heavy polypeptide
NES nestin
NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (human; man).
NFE2L2 nuclear factor, erythroid 2-like 2
NFIC nuclear factor I/C (CCAAT-binding transcription factor)
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NGF nerve growth factor (beta polypeptide)
NGFR nerve growth factor receptor
NOTCH1 notch 1
NPPA natriuretic peptide A
NREP neuronal regeneration related protein
NRG1 neuregulin 1
NTF3 neurotrophin 3
OCM oncomodulin
ODAM odontogenic, ameloblast asssociated
OSM oncostatin M
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
PAMR1 peptidase domain containing associated with muscle regeneration 1
PAPPA pregnancy-associated plasma protein A, pappalysin 1
PAX2 paired box 2
PAX6 paired box 6
PAX7 paired box 7
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PDX1 pancreatic and duodenal homeobox 1
PEG10 paternally expressed 10
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
PIM1 Pim-1 proto-oncogene, serine/threonine kinase
PLAU plasminogen activator, urokinase
PLAUR plasminogen activator, urokinase receptor
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PPARG peroxisome proliferator-activated receptor gamma
PRDX1 peroxiredoxin 1
PRDX2 peroxiredoxin 2
PROM1 prominin 1
PRPH peripherin
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1
REG3A regenerating islet-derived 3 alpha
RIPK2 receptor-interacting serine-threonine kinase 2
RIT1 Ras-like without CAAX 1
RRP8 ribosomal RNA processing 8, methyltransferase, homolog (yeast)
RTN3 reticulon 3
RTN4 reticulon 4
RTN4R reticulon 4 receptor
RUNX2 runt-related transcription factor 2
S100A1 S100 calcium binding protein A1
S100A8 S100 calcium binding protein A8
S100B S100 calcium binding protein B
SCN9A sodium channel, voltage gated, type IX alpha subunit
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SESN1 sestrin 1
SESN2 sestrin 2
SET SET nuclear proto-oncogene
SFTPA1 surfactant protein A1
SFTPD surfactant protein D
SGK1 serum/glucocorticoid regulated kinase 1
SHH sonic hedgehog
SIRT1 sirtuin 1
SMAD4 SMAD family member 4
SOCS3 suppressor of cytokine signaling 3
SORBS1 sorbin and SH3 domain containing 1
SOX9 SRY (sex determining region Y)-box 9
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STK11 serine/threonine kinase 11
STMN1 stathmin 1
STMN2 stathmin 2
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TGFA transforming growth factor, alpha
TGFB1 transforming growth factor, beta 1
TIGAR TP53 induced glycolysis regulatory phosphatase
TLR4 toll-like receptor 4
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNFSF12 tumor necrosis factor (ligand) superfamily, member 12
TNIP2 TNFAIP3 interacting protein 2
TP53 tumor protein p53
TP63 tumor protein p63
TRIM33 tripartite motif containing 33
VEGFA vascular endothelial growth factor A
VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1
VTN vitronectin
WNT7A wingless-type MMTV integration site family, member 7A
YAP1 Yes-associated protein 1
ZNF37A zinc finger protein 37A