retinoic Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

310 genes co-occuring with the biological term retinoic in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ADAP1 ArfGAP with dual PH domains 1
ADH1C alcohol dehydrogenase 1C (class I), gamma polypeptide
AFP alpha-fetoprotein
AGER advanced glycosylation end product-specific receptor
AGO3 argonaute RISC catalytic component 3
AHR aryl hydrocarbon receptor
AJUBA ajuba LIM protein
AKAP8 A kinase (PRKA) anchor protein 8
AKR1B10 aldo-keto reductase family 1, member B10 (aldose reductase)
AKR1C3 aldo-keto reductase family 1, member C3
ALB albumin
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ALDH1A2 aldehyde dehydrogenase 1 family, member A2
ALDH1A3 aldehyde dehydrogenase 1 family, member A3
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
APC adenomatous polyposis coli
APOD apolipoprotein D
APOM apolipoprotein M
APP amyloid beta (A4) precursor protein
AQP1 aquaporin 1 (Colton blood group)
AQP3 aquaporin 3 (Gill blood group)
AREG amphiregulin
ARID5A AT rich interactive domain 5A (MRF1-like)
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5
ASXL2 additional sex combs like transcriptional regulator 2
ATM ATM serine/threonine kinase
ATP7A ATPase, Cu++ transporting, alpha polypeptide
BBC3 BCL2 binding component 3
BCL2 B-cell CLL/lymphoma 2
BCL2L1 BCL2-like 1
BCO1 beta-carotene oxygenase 1
BCOR BCL6 corepressor
BMP2 bone morphogenetic protein 2
BMP4 bone morphogenetic protein 4
BRCA1 breast cancer 1, early onset
BRD7 bromodomain containing 7
BTG2 BTG family, member 2
CACYBP calcyclin binding protein
CAMK2G calcium/calmodulin-dependent protein kinase II gamma
CASP8 caspase 8, apoptosis-related cysteine peptidase
CCDC26 CCDC26 long non-coding RNA
CCL2 chemokine (C-C motif) ligand 2
CCL24 chemokine (C-C motif) ligand 24
CCND3 cyclin D3
CCNE1 cyclin E1
CCR3 chemokine (C-C motif) receptor 3
CD180 CD180 molecule
CD1C CD1c molecule
CD1D CD1d molecule
CD38 CD38 molecule
CD40 CD40 molecule, TNF receptor superfamily member 5
CDH5 cadherin 5, type 2 (vascular endothelium)
CDK2 cyclin-dependent kinase 2
CDK5 cyclin-dependent kinase 5
CDK9 cyclin-dependent kinase 9
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CDX2 caudal type homeobox 2
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon
CHUK conserved helix-loop-helix ubiquitous kinase
CLIP1 CAP-GLY domain containing linker protein 1
CNTF ciliary neurotrophic factor
CRABP1 cellular retinoic acid binding protein 1
CRABP2 cellular retinoic acid binding protein 2
CREB1 cAMP responsive element binding protein 1
CREBBP CREB binding protein
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTNNBIP1 catenin, beta interacting protein 1
CUL3 cullin 3
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1
CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1
CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1
CYP2S1 cytochrome P450, family 2, subfamily S, polypeptide 1
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
DDIT3 DNA-damage-inducible transcript 3
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DHRS9 dehydrogenase/reductase (SDR family) member 9
DHX58 DEXH (Asp-Glu-X-His) box polypeptide 58
DICER1 dicer 1, ribonuclease type III
DIXDC1 DIX domain containing 1
DLX4 distal-less homeobox 4
DMP1 dentin matrix acidic phosphoprotein 1
DRD2 dopamine receptor D2
DROSHA drosha, ribonuclease type III
DUOX2 dual oxidase 2
ELANE elastase, neutrophil expressed
EP300 E1A binding protein p300
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
ETV1 ets variant 1
ETV6 ets variant 6
FAM160B2 family with sequence similarity 160, member B2
FAS Fas cell surface death receptor
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23)
FGF4 fibroblast growth factor 4
FGFR2 fibroblast growth factor receptor 2
FOS FBJ murine osteosarcoma viral oncogene homolog
FOXO3 forkhead box O3
FOXP3 forkhead box P3
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila)
GABPA GA binding protein transcription factor, alpha subunit 60kDa
GABRR1 gamma-aminobutyric acid (GABA) A receptor, rho 1
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2
HAL histidine ammonia-lyase
HDAC3 histone deacetylase 3
HES1 hes family bHLH transcription factor 1
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIST4H4 histone cluster 4, H4
HMMR hyaluronan-mediated motility receptor (RHAMM)
HOXC4 homeobox C4
HOXC6 homeobox C6
HSP90AA2P heat shock protein 90kDa alpha (cytosolic), class A member 2, pseudogene
HSPA9 heat shock 70kDa protein 9 (mortalin)
ICAM1 intercellular adhesion molecule 1
ICMT isoprenylcysteine carboxyl methyltransferase
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
IFIH1 interferon induced with helicase C domain 1
IFIT1 interferon-induced protein with tetratricopeptide repeats 1
IFIT3 interferon-induced protein with tetratricopeptide repeats 3
IFNB1 interferon, beta 1, fibroblast
IFNE interferon, epsilon
IFNG interferon, gamma
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF2 insulin-like growth factor 2
IL17A interleukin 17A
IL1B interleukin 1, beta
IL2 interleukin 2
IL4 interleukin 4
IL6 interleukin 6
IRF1 interferon regulatory factor 1
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
JUN jun proto-oncogene
KDM6A lysine (K)-specific demethylase 6A
KLF5 Kruppel-like factor 5 (intestinal)
KLK10 kallikrein-related peptidase 10
KLK5 kallikrein-related peptidase 5
KLK7 kallikrein-related peptidase 7
KMT2D lysine (K)-specific methyltransferase 2D
KRT13 keratin 13, type I
LBR lamin B receptor
LCN2 lipocalin 2
LCP2 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)
LRP2 low density lipoprotein receptor-related protein 2
LTBR lymphotoxin beta receptor (TNFR superfamily, member 3)
LYN LYN proto-oncogene, Src family tyrosine kinase
MAGED2 melanoma antigen family D2
MAVS mitochondrial antiviral signaling protein
MDK midkine (neurite growth-promoting factor 2)
MECOM MDS1 and EVI1 complex locus
MED1 mediator complex subunit 1
MED15 mediator complex subunit 15
MED25 mediator complex subunit 25
MIR10A microRNA 10a
MIR137 microRNA 137
MIR146A microRNA 146a
MIR148B microRNA 148b
MIR152 microRNA 152
MIR29B1 microRNA 29b-1
MIR29C microRNA 29c
MIR9-1 microRNA 9-1
MMP1 matrix metallopeptidase 1
MMP9 matrix metallopeptidase 9
MNAT1 MNAT CDK-activating kinase assembly factor 1
MRC2 mannose receptor, C type 2
MSRA methionine sulfoxide reductase A
MUC4 mucin 4, cell surface associated
MUC5AC mucin 5AC, oligomeric mucus/gel-forming
MYADM myeloid-associated differentiation marker
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
NAA10 N(alpha)-acetyltransferase 10, NatA catalytic subunit
NANOG Nanog homeobox
NAV2 neuron navigator 2
NCAM1 neural cell adhesion molecule 1
NCF2 neutrophil cytosolic factor 2
NCOA1 nuclear receptor coactivator 1
NCOA3 nuclear receptor coactivator 3
NCOR2 nuclear receptor corepressor 2
NEDD9 neural precursor cell expressed, developmentally down-regulated 9
NEU4 sialidase 4
NF1 neurofibromin 1
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
NOS3 nitric oxide synthase 3 (endothelial cell)
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NR0B2 nuclear receptor subfamily 0, group B, member 2
NR2F1 nuclear receptor subfamily 2, group F, member 1
NR2F2 nuclear receptor subfamily 2, group F, member 2
NR4A2 nuclear receptor subfamily 4, group A, member 2
NRD1 nardilysin (N-arginine dibasic convertase)
NRIP1 nuclear receptor interacting protein 1
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
NUCLEOLIN nucleolin multifunctional protein
ORMDL3 ORMDL sphingolipid biosynthesis regulator 3
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7
PARG poly (ADP-ribose) glycohydrolase
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble)
PDK4 pyruvate dehydrogenase kinase, isozyme 4
PDX1 pancreatic and duodenal homeobox 1
PHB2 prohibitin 2
PHF8 PHD finger protein 8
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
PKD1 polycystic kidney disease 1 (autosomal dominant)
PLAT plasminogen activator, tissue
PML promyelocytic leukemia
PNPLA6 patatin-like phospholipase domain containing 6
POMC proopiomelanocortin
POR P450 (cytochrome) oxidoreductase
POU5F1 POU class 5 homeobox 1
PPARA peroxisome proliferator-activated receptor alpha
PPARG peroxisome proliferator-activated receptor gamma
PPP2R4 protein phosphatase 2A activator, regulatory subunit 4
PRAME preferentially expressed antigen in melanoma
PREP prolyl endopeptidase
PRKCD protein kinase C, delta
PRKCQ protein kinase C, theta
PRNP prion protein
PTGDS prostaglandin D2 synthase 21kDa (brain)
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTK2 protein tyrosine kinase 2
PTOV1 prostate tumor overexpressed 1
RAB15 RAB15, member RAS oncogene family
RAE1 ribonucleic acid export 1
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RARA retinoic acid receptor, alpha
RARB retinoic acid receptor, beta
RARG retinoic acid receptor, gamma
RARRES1 retinoic acid receptor responder (tazarotene induced) 1
RBP1 retinol binding protein 1, cellular
RBP2 retinol binding protein 2, cellular
RBP4 retinol binding protein 4, plasma
RDH10 retinol dehydrogenase 10 (all-trans)
RDH16 retinol dehydrogenase 16 (all-trans)
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
REST RE1-silencing transcription factor
RET ret proto-oncogene
RNF125 ring finger protein 125, E3 ubiquitin protein ligase
RORA RAR-related orphan receptor A
RQCD1 RCD1 required for cell differentiation1 homolog (S. pombe)
RXRA retinoid X receptor, alpha
RXRB retinoid X receptor, beta
SELE selectin E
SFTPB surfactant protein B
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3
SIRT1 sirtuin 1
SKI SKI proto-oncogene
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6
SMAD2 SMAD family member 2
SMAD3 SMAD family member 3
SMAD4 SMAD family member 4
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal
SNW1 SNW domain containing 1
SOD2 superoxide dismutase 2, mitochondrial
SOX9 SRY (sex determining region Y)-box 9
SP1 Sp1 transcription factor
SP110 SP110 nuclear body protein
SP3 Sp3 transcription factor
SPI1 Spi-1 proto-oncogene
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT2 signal transducer and activator of transcription 2, 113kDa
STAT5B signal transducer and activator of transcription 5B
STRA13 stimulated by retinoic acid 13
STRA6 stimulated by retinoic acid 6
TFF3 trefoil factor 3 (intestinal)
TGFB1 transforming growth factor, beta 1
TGM2 transglutaminase 2
TGM4 transglutaminase 4
THBD thrombomodulin
THRA thyroid hormone receptor, alpha
TIMP1 TIMP metallopeptidase inhibitor 1
TJP1 tight junction protein 1
TLR3 toll-like receptor 3
TLR5 toll-like receptor 5
TLR7 toll-like receptor 7
TLR9 toll-like receptor 9
TNF tumor necrosis factor
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TOP2B topoisomerase (DNA) II beta 180kDa
TP63 tumor protein p63
TRIB1 tribbles pseudokinase 1
TRIM25 tripartite motif containing 25
TRIM32 tripartite motif containing 32
UBE2D3 ubiquitin-conjugating enzyme E2D 3
URGCP upregulator of cell proliferation
USP15 ubiquitin specific peptidase 15
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
VEGFB vascular endothelial growth factor B
VEGFC vascular endothelial growth factor C
WNT1 wingless-type MMTV integration site family, member 1
WNT11 wingless-type MMTV integration site family, member 11
WNT4 wingless-type MMTV integration site family, member 4
WNT5A wingless-type MMTV integration site family, member 5A
WRN Werner syndrome, RecQ helicase-like
WT1 Wilms tumor 1
WTIP Wilms tumor 1 interacting protein
XDH xanthine dehydrogenase
ZIC1 Zic family member 1