retinopathy Gene Set

Dataset HPO Gene-Disease Associations
Category disease or phenotype associations
Type phenotype
Description Any disease or disorder of the retina. (Experimental Factor Ontology, EFO_0003839)
External Link http://compbio.charite.de/hpoweb/showterm?id=HP:0000488
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Genes

71 genes associated with the retinopathy phenotype by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.

Symbol Name
ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6
AGXT alanine-glyoxylate aminotransferase
ALDH3A2 aldehyde dehydrogenase 3 family, member A2
APOE apolipoprotein E
ASXL1 additional sex combs like transcriptional regulator 1
BEST1 bestrophin 1
C4A complement component 4A (Rodgers blood group)
CDH3 cadherin 3, type 1, P-cadherin (placental)
CDK4 cyclin-dependent kinase 4
CDKN2A cyclin-dependent kinase inhibitor 2A
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
CEP41 centrosomal protein 41kDa
CHD7 chromodomain helicase DNA binding protein 7
CISD2 CDGSH iron sulfur domain 2
COL11A1 collagen, type XI, alpha 1
COL2A1 collagen, type II, alpha 1
COL9A1 collagen, type IX, alpha 1
COL9A2 collagen, type IX, alpha 2
COL9A3 collagen, type IX, alpha 3
CP ceruloplasmin (ferroxidase)
CSPP1 centrosome and spindle pole associated protein 1
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CTNS cystinosin, lysosomal cystine transporter
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
FIG4 FIG4 phosphoinositide 5-phosphatase
GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HBB hemoglobin, beta
HLA-B major histocompatibility complex, class I, B
HLA-DPB1 major histocompatibility complex, class II, DP beta 1
IDUA iduronidase, alpha-L-
IL10 interleukin 10
IL12B interleukin 12B
IL12RB2 interleukin 12 receptor, beta 2
IL23R interleukin 23 receptor
KIF11 kinesin family member 11
LETM1 leucine zipper-EF-hand containing transmembrane protein 1
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MCOLN1 mucolipin 1
MEFV Mediterranean fever
MFSD8 major facilitator superfamily domain containing 8
MLX MLX, MAX dimerization protein
MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria
MT-TK tRNA
MT-TL1 tRNA
MTTP microsomal triglyceride transfer protein
NELFA negative elongation factor complex member A
NEU1 sialidase 1 (lysosomal sialidase)
NOD2 nucleotide-binding oligomerization domain containing 2
NR2E3 nuclear receptor subfamily 2, group E, member 3
PEX7 peroxisomal biogenesis factor 7
PHYH phytanoyl-CoA 2-hydroxylase
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
POT1 protection of telomeres 1
PROS1 protein S (alpha)
PRTN3 proteinase 3
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
STAT4 signal transducer and activator of transcription 4
TERC telomerase RNA component
TERT telomerase reverse transcriptase
TINF2 TERF1 (TRF1)-interacting nuclear factor 2
TLR4 toll-like receptor 4
TMEM231 transmembrane protein 231
TREX1 three prime repair exonuclease 1
TRNE
TULP1 tubby like protein 1
WFS1 Wolfram syndrome 1 (wolframin)
WHSC1 Wolf-Hirschhorn syndrome candidate 1