ronidazole-3557 Gene Set

Dataset CMAP Signatures of Differentially Expressed Genes for Small Molecules
Category transcriptomics
Type small molecule perturbation
Description small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis)
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Genes

199 genes differentially expressed following the ronidazole-3557 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.

increased expression

Symbol Name
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group)
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain
AMPH amphiphysin
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1
ARID5A AT rich interactive domain 5A (MRF1-like)
BNC2 basonuclin 2
C7ORF69 chromosome 7 open reading frame 69
CACTIN cactin, spliceosome C complex subunit
CALCR calcitonin receptor
CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta
CCDC57 coiled-coil domain containing 57
CCDC71 coiled-coil domain containing 71
CCRL2 chemokine (C-C motif) receptor-like 2
CD22 CD22 molecule
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CHRNB3 cholinergic receptor, nicotinic, beta 3 (neuronal)
CLDN1 claudin 1
CLSTN3 calsyntenin 3
CNNM1 cyclin and CBS domain divalent metal cation transport mediator 1
CNTNAP2 contactin associated protein-like 2
COL1A1 collagen, type I, alpha 1
CRNN cornulin
CTIF CBP80/20-dependent translation initiation factor
CXCR2 chemokine (C-X-C motif) receptor 2
DEF6 differentially expressed in FDCP 6 homolog (mouse)
EFNA3 ephrin-A3
ERC2-IT1 ERC2 intronic transcript 1
ERCC2 excision repair cross-complementation group 2
FCMR Fc fragment of IgM receptor
FLNC filamin C, gamma
FYB FYN binding protein
GAD1 glutamate decarboxylase 1 (brain, 67kDa)
GPR153 G protein-coupled receptor 153
GPR21 G protein-coupled receptor 21
GPR37 G protein-coupled receptor 37 (endothelin receptor type B-like)
GSTA1 glutathione S-transferase alpha 1
HDAC7 histone deacetylase 7
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HLA-DOA major histocompatibility complex, class II, DO alpha
HOXB2 homeobox B2
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
KIAA0125 KIAA0125
KIF25-AS1 KIF25 antisense RNA 1
KIR2DL5A killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 5A
KLK2 kallikrein-related peptidase 2
KRT33A keratin 33A, type I
KRT85 keratin 85, type II
LILRB3 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3
LMX1B LIM homeobox transcription factor 1, beta
LPPR1 lipid phosphate phosphatase-related protein type 1
MAOB monoamine oxidase B
MAP2 microtubule-associated protein 2
MAPK8IP2 mitogen-activated protein kinase 8 interacting protein 2
MAPRE3 microtubule-associated protein, RP/EB family, member 3
MID1 midline 1
MMP25 matrix metallopeptidase 25
MMP3 matrix metallopeptidase 3
MS4A1 membrane-spanning 4-domains, subfamily A, member 1
NAGLU N-acetylglucosaminidase, alpha
NF1 neurofibromin 1
NOVA2 neuro-oncological ventral antigen 2
NPHP1 nephronophthisis 1 (juvenile)
NPPA natriuretic peptide A
NR2F1 nuclear receptor subfamily 2, group F, member 1
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
NTRK3 neurotrophic tyrosine kinase, receptor, type 3
ONECUT1 one cut homeobox 1
PCDHB13 protocadherin beta 13
PCDHB17P protocadherin beta 17 pseudogene
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble)
PHF20 PHD finger protein 20
PIDD1 p53-induced death domain protein 1
PIK3R5 phosphoinositide-3-kinase, regulatory subunit 5
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha
PLXNB3 plexin B3
PMP2 peripheral myelin protein 2
PTGDS prostaglandin D2 synthase 21kDa (brain)
RARB retinoic acid receptor, beta
RELN reelin
RGS12 regulator of G-protein signaling 12
RND1 Rho family GTPase 1
RUNX1 runt-related transcription factor 1
SEC14L2 SEC14-like 2 (S. cerevisiae)
SIPA1 signal-induced proliferation-associated 1
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37
SLC35E2 solute carrier family 35, member E2
SLC7A8 solute carrier family 7 (amino acid transporter light chain, L system), member 8
SLN sarcolipin
SPOCK2 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
SSX1 synovial sarcoma, X breakpoint 1
SYT11 synaptotagmin XI
TBKBP1 TBK1 binding protein 1
TCL6 T-cell leukemia/lymphoma 6 (non-protein coding)
TPSG1 tryptase gamma 1
TRAIP TRAF interacting protein
TSC22D4 TSC22 domain family, member 4
TSSK2 testis-specific serine kinase 2
TUBB7P tubulin, beta 7, pseudogene
UBXN1 UBX domain protein 1
WSCD1 WSC domain containing 1

decreased expression

Symbol Name
ADAT1 adenosine deaminase, tRNA-specific 1
ARHGDIB Rho GDP dissociation inhibitor (GDI) beta
BAHCC1 BAH domain and coiled-coil containing 1
BBC3 BCL2 binding component 3
BRIP1 BRCA1 interacting protein C-terminal helicase 1
BTF3P12 basic transcription factor 3 pseudogene 12
C14ORF93 chromosome 14 open reading frame 93
C1ORF35 chromosome 1 open reading frame 35
CAMKMT calmodulin-lysine N-methyltransferase
CAPG capping protein (actin filament), gelsolin-like
CCDC68 coiled-coil domain containing 68
CCZ1B CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)
CDK3 cyclin-dependent kinase 3
CEP97 centrosomal protein 97kDa
CHST7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant
COL9A2 collagen, type IX, alpha 2
CORT cortistatin
CWC25 CWC25 spliceosome-associated protein homolog (S. cerevisiae)
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1
DCAF16 DDB1 and CUL4 associated factor 16
DDX54 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
DENND4C DENN/MADD domain containing 4C
DEPDC1 DEP domain containing 1
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3
DSN1 DSN1, MIS12 kinetochore complex component
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
EEF2KMT eukaryotic elongation factor 2 lysine methyltransferase
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
EIF5A2 eukaryotic translation initiation factor 5A2
EPHA4 EPH receptor A4
FBXL15 F-box and leucine-rich repeat protein 15
FKBP14 FK506 binding protein 14, 22 kDa
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C
GBP2 guanylate binding protein 2, interferon-inducible
GINS4 GINS complex subunit 4 (Sld5 homolog)
GIT2 G protein-coupled receptor kinase interacting ArfGAP 2
GLS2 glutaminase 2 (liver, mitochondrial)
GPATCH2L G patch domain containing 2-like
GUSBP3 glucuronidase, beta pseudogene 3
HELLS helicase, lymphoid-specific
IFT81 intraflagellar transport 81
IPP intracisternal A particle-promoted polypeptide
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
KANSL1L KAT8 regulatory NSL complex subunit 1-like
KCNN4 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4
KCTD20 potassium channel tetramerization domain containing 20
LAMB3 laminin, beta 3
LIN7A lin-7 homolog A (C. elegans)
LINC00339 long intergenic non-protein coding RNA 339
LZTR1 leucine-zipper-like transcription regulator 1
MAGT1 magnesium transporter 1
MBNL3 muscleblind-like splicing regulator 3
MBTD1 mbt domain containing 1
MEFV Mediterranean fever
MFSD11 major facilitator superfamily domain containing 11
MPHOSPH8 M-phase phosphoprotein 8
NDE1 nudE neurodevelopment protein 1
NPFFR1 neuropeptide FF receptor 1
PARPBP PARP1 binding protein
PCDHB8 protocadherin beta 8
POM121 POM121 transmembrane nucleoporin
POPDC3 popeye domain containing 3
PROS1 protein S (alpha)
PRSS16 protease, serine, 16 (thymus)
PTPRE protein tyrosine phosphatase, receptor type, E
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase
SCAI suppressor of cancer cell invasion
SCGB2A2 secretoglobin, family 2A, member 2
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
SETD8 SET domain containing (lysine methyltransferase) 8
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5
SLC35C2 solute carrier family 35 (GDP-fucose transporter), member C2
SLC35F6 solute carrier family 35, member F6
SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8
SLC9A2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
SMA4 glucuronidase, beta pseudogene
SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma)
STAG3L1 stromal antigen 3-like 1 (pseudogene)
SYTL2 synaptotagmin-like 2
TAF13 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1
TCTN1 tectonic family member 1
TDRD1 tudor domain containing 1
TMEM53 transmembrane protein 53
TRABD TraB domain containing
TRIM5 tripartite motif containing 5
TRMT2B tRNA methyltransferase 2 homolog B (S. cerevisiae)
VASH2 vasohibin 2
XPNPEP3 X-prolyl aminopeptidase 3, mitochondrial
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2
ZNF227 zinc finger protein 227
ZNF606 zinc finger protein 606
ZNF652 zinc finger protein 652
ZNF675 zinc finger protein 675
ZNF747 zinc finger protein 747
ZNF91 zinc finger protein 91