sarcoglycan complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex. (Gene Ontology, GO_0016012)
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Genes

47 proteins co-occuring with the sarcoglycan complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) 2.83586
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) 2.79006
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 2.67619
DMD dystrophin 2.58386
SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) 2.47428
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 2.16686
SSPN sarcospan 2.07142
SGCE sarcoglycan, epsilon 2.05321
SGCZ sarcoglycan, zeta 1.86005
DYSF dysferlin 1.77796
CAPN3 calpain 3, (p94) 1.73561
LAMA2 laminin, alpha 2 1.63479
UTRN utrophin 1.44573
CAV3 caveolin 3 1.21221
FLNC filamin C, gamma 1.12909
SNTA1 syntrophin, alpha 1 1.10613
MYOT myotilin 1.09442
FKRP fukutin related protein 1.09136
EMD emerin 0.888859
DTNB dystrobrevin, beta 0.838269
FKTN fukutin 0.834138
ADHFE1 alcohol dehydrogenase, iron containing, 1 0.756345
ITGA7 integrin, alpha 7 0.750452
MTFR1 mitochondrial fission regulator 1 0.681591
TRIM32 tripartite motif containing 32 0.636295
PLAGL1 pleiomorphic adenoma gene-like 1 0.568832
ACTN2 actinin, alpha 2 0.54936
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.531258
TUSC3 tumor suppressor candidate 3 0.498636
NEB nebulin 0.485289
LMNA lamin A/C 0.473617
LDB3 LIM domain binding 3 0.451233
ACSS1 acyl-CoA synthetase short-chain family member 1 0.428284
GPX7 glutathione peroxidase 7 0.41143
TTN titin 0.408699
VCL vinculin 0.398587
TCAP titin-cap 0.358228
DNM2 dynamin 2 0.351382
KIF21A kinesin family member 21A 0.345692
POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 0.32195
MYOZ1 myozenin 1 0.313344
CAPN7 calpain 7 0.303283
AQP4 aquaporin 4 0.27998
MYOF myoferlin 0.270068
SPTB spectrin, beta, erythrocytic 0.24424
IKBKAP inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein 0.173003
GAA glucosidase, alpha; acid 0.1632